Literature DB >> 22945333

Genetic encoding of a bicyclo[6.1.0]nonyne-charged amino acid enables fast cellular protein imaging by metal-free ligation.

Annika Borrmann1, Sigrid Milles, Tilman Plass, Jan Dommerholt, Jorge M M Verkade, Manfred Wiessler, Carsten Schultz, Jan C M van Hest, Floris L van Delft, Edward A Lemke.   

Abstract

Visualizing biomolecules by fluorescent tagging is a powerful method for studying their behaviour and function inside cells. We prepared and genetically encoded an unnatural amino acid (UAA) that features a bicyclononyne moiety. This UAA offered exceptional reactivity in strain-promoted azide-alkyne cycloadditions. Kinetic measurements revealed that the UAA reacted also remarkably fast in the inverse-electron-demand Diels-Alder cycloaddition with tetrazine-conjugated dyes. Genetic encoding of the new UAA inside mammalian cells and its subsequent selective labeling at low dye concentrations demonstrate the usefulness of the new amino acid for future imaging studies.
Copyright © 2012 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

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Year:  2012        PMID: 22945333     DOI: 10.1002/cbic.201200407

Source DB:  PubMed          Journal:  Chembiochem        ISSN: 1439-4227            Impact factor:   3.164


  55 in total

1.  Imaging and manipulating proteins in live cells through covalent labeling.

Authors:  Lin Xue; Iuliia A Karpenko; Julien Hiblot; Kai Johnsson
Journal:  Nat Chem Biol       Date:  2015-11-17       Impact factor: 15.040

Review 2.  Expanding room for tetrazine ligations in the in vivo chemistry toolbox.

Authors:  Jolita Sečkutė; Neal K Devaraj
Journal:  Curr Opin Chem Biol       Date:  2013-09-07       Impact factor: 8.822

3.  Labeling proteins on live mammalian cells using click chemistry.

Authors:  Ivana Nikić; Jun Hee Kang; Gemma Estrada Girona; Iker Valle Aramburu; Edward A Lemke
Journal:  Nat Protoc       Date:  2015-04-23       Impact factor: 13.491

4.  Tyrosine-Selective Functionalization for Bio-Orthogonal Cross-Linking of Engineered Protein Hydrogels.

Authors:  Christopher M Madl; Sarah C Heilshorn
Journal:  Bioconjug Chem       Date:  2017-02-02       Impact factor: 4.774

5.  A genetically encoded aldehyde for rapid protein labelling.

Authors:  Alfred Tuley; Yan-Jiun Lee; Bo Wu; Zhiyong U Wang; Wenshe R Liu
Journal:  Chem Commun (Camb)       Date:  2014-07-18       Impact factor: 6.222

Review 6.  Pyrrolysyl-tRNA synthetase: an ordinary enzyme but an outstanding genetic code expansion tool.

Authors:  Wei Wan; Jeffery M Tharp; Wenshe R Liu
Journal:  Biochim Biophys Acta       Date:  2014-03-12

7.  Expanding the library and substrate diversity of the pyrrolysyl-tRNA synthetase to incorporate unnatural amino acids containing conjugated rings.

Authors:  Vanessa K Lacey; Gordon V Louie; Joseph P Noel; Lei Wang
Journal:  Chembiochem       Date:  2013-09-09       Impact factor: 3.164

8.  Bioorthogonal fluorescent labeling of functional G-protein-coupled receptors.

Authors:  He Tian; Saranga Naganathan; Manija A Kazmi; Thue W Schwartz; Thomas P Sakmar; Thomas Huber
Journal:  Chembiochem       Date:  2014-07-18       Impact factor: 3.164

9.  A genetically encoded cyclobutene probe for labelling of live cells.

Authors:  K Liu; B Enns; B Evans; N Wang; X Shang; W Sittiwong; P H Dussault; J Guo
Journal:  Chem Commun (Camb)       Date:  2017-09-21       Impact factor: 6.222

10.  Site-specific chemical fatty-acylation for gain-of-function analysis of protein S-palmitoylation in live cells.

Authors:  Yumeng Li; Shushu Wang; Yanchi Chen; Manjia Li; Xiaoshu Dong; Howard C Hang; Tao Peng
Journal:  Chem Commun (Camb)       Date:  2020-10-23       Impact factor: 6.222

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