Literature DB >> 22918378

Crowd-sourced BioGames: managing the big data problem for next-generation lab-on-a-chip platforms.

Sam Mavandadi1, Stoyan Dimitrov, Steve Feng, Frank Yu, Richard Yu, Uzair Sikora, Aydogan Ozcan.   

Abstract

We describe a crowd-sourcing based solution for handling large quantities of data that are created by e.g., emerging digital imaging and sensing devices, including next generation lab-on-a-chip platforms. We show that in cases where the diagnosis is a binary decision (e.g., positive vs. negative, or infected vs. uninfected), it is possible to make accurate diagnosis by crowd-sourcing the raw data (e.g., microscopic images of specimens/cells) using entertaining digital games (i.e., ) that are played on PCs, tablets or mobile phones. We report the results and the analysis of a large-scale public experiment toward diagnosis of malaria infected human red blood cells (RBCs), where binary responses from approximately 1000 untrained individuals from more than 60 different countries are combined together (corresponding to more than 1 million cell diagnoses), resulting in an accuracy level that is comparable to those of expert medical professionals. This platform holds promise toward cost-effective and accurate tele-pathology, improved training of medical personnel, and can also be used to manage the "Big Data" problem that is emerging through next generation digital lab-on-a-chip devices.

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Mesh:

Year:  2012        PMID: 22918378      PMCID: PMC3477593          DOI: 10.1039/c2lc40614d

Source DB:  PubMed          Journal:  Lab Chip        ISSN: 1473-0189            Impact factor:   6.799


  18 in total

1.  Algorithm discovery by protein folding game players.

Authors:  Firas Khatib; Seth Cooper; Michael D Tyka; Kefan Xu; Ilya Makedon; Zoran Popovic; David Baker; Foldit Players
Journal:  Proc Natl Acad Sci U S A       Date:  2011-11-07       Impact factor: 11.205

2.  Integrated rapid-diagnostic-test reader platform on a cellphone.

Authors:  Onur Mudanyali; Stoyan Dimitrov; Uzair Sikora; Swati Padmanabhan; Isa Navruz; Aydogan Ozcan
Journal:  Lab Chip       Date:  2012-05-17       Impact factor: 6.799

Review 3.  Microfluidic diagnostic technologies for global public health.

Authors:  Paul Yager; Thayne Edwards; Elain Fu; Kristen Helton; Kjell Nelson; Milton R Tam; Bernhard H Weigl
Journal:  Nature       Date:  2006-07-27       Impact factor: 49.962

4.  Lensfree microscopy on a cellphone.

Authors:  Derek Tseng; Onur Mudanyali; Cetin Oztoprak; Serhan O Isikman; Ikbal Sencan; Oguzhan Yaglidere; Aydogan Ozcan
Journal:  Lab Chip       Date:  2010-05-06       Impact factor: 6.799

5.  Optofluidic fluorescent imaging cytometry on a cell phone.

Authors:  Hongying Zhu; Sam Mavandadi; Ahmet F Coskun; Oguzhan Yaglidere; Aydogan Ozcan
Journal:  Anal Chem       Date:  2011-08-02       Impact factor: 6.986

6.  Cost-effective and compact wide-field fluorescent imaging on a cell-phone.

Authors:  Hongying Zhu; Oguzhan Yaglidere; Ting-Wei Su; Derek Tseng; Aydogan Ozcan
Journal:  Lab Chip       Date:  2010-11-09       Impact factor: 6.799

7.  Portable, battery-operated, low-cost, bright field and fluorescence microscope.

Authors:  Andrew R Miller; Gregory L Davis; Z Maria Oden; Mohamad Reza Razavi; Abolfazl Fateh; Morteza Ghazanfari; Farid Abdolrahimi; Shahin Poorazar; Fatemeh Sakhaie; Randall J Olsen; Ahmad Reza Bahrmand; Mark C Pierce; Edward A Graviss; Rebecca Richards-Kortum
Journal:  PLoS One       Date:  2010-08-04       Impact factor: 3.240

8.  Predicting protein structures with a multiplayer online game.

Authors:  Seth Cooper; Firas Khatib; Adrien Treuille; Janos Barbero; Jeehyung Lee; Michael Beenen; Andrew Leaver-Fay; David Baker; Zoran Popović; Foldit Players
Journal:  Nature       Date:  2010-08-05       Impact factor: 49.962

9.  Cell-phone-based platform for biomedical device development and education applications.

Authors:  Zachary J Smith; Kaiqin Chu; Alyssa R Espenson; Mehdi Rahimzadeh; Amy Gryshuk; Marco Molinaro; Denis M Dwyre; Stephen Lane; Dennis Matthews; Sebastian Wachsmann-Hogiu
Journal:  PLoS One       Date:  2011-03-02       Impact factor: 3.240

10.  Using internet and mobile phone technology to deliver an automated physical activity program: randomized controlled trial.

Authors:  Robert Hurling; Michael Catt; Marco De Boni; Bruce William Fairley; Tina Hurst; Peter Murray; Alannah Richardson; Jaspreet Singh Sodhi
Journal:  J Med Internet Res       Date:  2007-04-27       Impact factor: 5.428

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  22 in total

Review 1.  Crowdsourcing--harnessing the masses to advance health and medicine, a systematic review.

Authors:  Benjamin L Ranard; Yoonhee P Ha; Zachary F Meisel; David A Asch; Shawndra S Hill; Lance B Becker; Anne K Seymour; Raina M Merchant
Journal:  J Gen Intern Med       Date:  2013-07-11       Impact factor: 5.128

2.  Smart-phone based computational microscopy using multi-frame contact imaging on a fiber-optic array.

Authors:  Isa Navruz; Ahmet F Coskun; Justin Wong; Saqib Mohammad; Derek Tseng; Richie Nagi; Stephen Phillips; Aydogan Ozcan
Journal:  Lab Chip       Date:  2013-08-12       Impact factor: 6.799

3.  Large-scale medical image annotation with crowd-powered algorithms.

Authors:  Eric Heim; Tobias Roß; Alexander Seitel; Keno März; Bram Stieltjes; Matthias Eisenmann; Johannes Lebert; Jasmin Metzger; Gregor Sommer; Alexander W Sauter; Fides Regina Schwartz; Andreas Termer; Felix Wagner; Hannes Götz Kenngott; Lena Maier-Hein
Journal:  J Med Imaging (Bellingham)       Date:  2018-09-08

Review 4.  Big Data Usage Patterns in the Health Care Domain: A Use Case Driven Approach Applied to the Assessment of Vaccination Benefits and Risks. Contribution of the IMIA Primary Healthcare Working Group.

Authors:  H Liyanage; S de Lusignan; S-T Liaw; C E Kuziemsky; F Mold; P Krause; D Fleming; S Jones
Journal:  Yearb Med Inform       Date:  2014-08-15

5.  Scientific Discovery Games for Biomedical Research.

Authors:  Rhiju Das; Benjamin Keep; Peter Washington; Ingmar H Riedel-Kruse
Journal:  Annu Rev Biomed Data Sci       Date:  2019-07

6.  Based Real Time Remote Health Monitoring Systems: A Review on Patients Prioritization and Related "Big Data" Using Body Sensors information and Communication Technology.

Authors:  Naser Kalid; A A Zaidan; B B Zaidan; Omar H Salman; M Hashim; H Muzammil
Journal:  J Med Syst       Date:  2017-12-29       Impact factor: 4.460

7.  LESSONS LEARNED ABOUT PUBLIC HEALTH FROM ONLINE CROWD SURVEILLANCE.

Authors:  Shawndra Hill; Raina Merchant; Lyle Ungar
Journal:  Big Data       Date:  2013-09-10       Impact factor: 2.128

8.  Based on Real Time Remote Health Monitoring Systems: A New Approach for Prioritization "Large Scales Data" Patients with Chronic Heart Diseases Using Body Sensors and Communication Technology.

Authors:  Naser Kalid; A A Zaidan; B B Zaidan; Omar H Salman; M Hashim; O S Albahri; A S Albahri
Journal:  J Med Syst       Date:  2018-03-02       Impact factor: 4.460

Review 9.  Computational imaging, sensing and diagnostics for global health applications.

Authors:  Ahmet F Coskun; Aydogan Ozcan
Journal:  Curr Opin Biotechnol       Date:  2013-09-07       Impact factor: 9.740

Review 10.  Biomedical imaging and sensing using flatbed scanners.

Authors:  Zoltán Göröcs; Aydogan Ozcan
Journal:  Lab Chip       Date:  2014-09-07       Impact factor: 6.799

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