Warning: Undefined array key "mm" in /www/wwwroot/www.ai-bt.com/si.php on line 10 Deprecated: trim(): Passing null to parameter #1 ($string) of type string is deprecated in /www/wwwroot/www.ai-bt.com/si.php on line 10 Yeast one-hybrid assays: a historical and technical perspective.

Literature DB >> 22884952

Yeast one-hybrid assays: a historical and technical perspective.

John S Reece-Hoyes¹, A J Marian Walhout.

Abstract

Since its development about two decades ago, the yeast one-hybrid (Y1H) assay has become an important technique for detecting physical interactions between sequence-specific regulatory transcription factor proteins (TFs) and their DNA target sites. Multiple versions of the Y1H methodology have been developed, each with technical differences and unique advantages. We will discuss several of these technical variations in detail, and also provide some ideas for how Y1H assays can be further improved.

Entities: Chemical Disease Gene Species

Mesh：

Substances：
Transcription Factors

Year: 2012 PMID： 22884952 PMCID： PMC3448804 DOI： 10.1016/j.ymeth.2012.07.027

Source DB: PubMed Journal: Methods ISSN： 1046-2023 Impact factor: 3.608

38 in total

1. GATEWAY recombinational cloning: application to the cloning of large numbers of open reading frames or ORFeomes.

Authors: A J Walhout; G F Temple; M A Brasch; J L Hartley; M A Lorson; S van den Heuvel; M Vidal
Journal: Methods Enzymol Date: 2000 Impact factor: 1.600

2. A gene-centered C. elegans protein-DNA interaction network.

Authors: Bart Deplancke; Arnab Mukhopadhyay; Wanyuan Ao; Ahmed M Elewa; Christian A Grove; Natalia J Martinez; Reynaldo Sequerra; Lynn Doucette-Stamm; John S Reece-Hoyes; Ian A Hope; Heidi A Tissenbaum; Susan E Mango; Albertha J M Walhout
Journal: Cell Date: 2006-06-16 Impact factor: 41.582

3. C. elegans ORFeome version 1.1: experimental verification of the genome annotation and resource for proteome-scale protein expression.

Authors: Jérôme Reboul; Philippe Vaglio; Jean-François Rual; Philippe Lamesch; Monica Martinez; Christopher M Armstrong; Siming Li; Laurent Jacotot; Nicolas Bertin; Rekin's Janky; Troy Moore; James R Hudson; James L Hartley; Michael A Brasch; Jean Vandenhaute; Simon Boulton; Gregory A Endress; Sarah Jenna; Eric Chevet; Vasilis Papasotiropoulos; Peter P Tolias; Jason Ptacek; Mike Snyder; Raymond Huang; Mark R Chance; Hongmei Lee; Lynn Doucette-Stamm; David E Hill; Marc Vidal
Journal: Nat Genet Date: 2003-05 Impact factor: 38.330

4. Converting a eukaryotic transcriptional inhibitor into an activator.

Authors: J Ma; M Ptashne
Journal: Cell Date: 1988-11-04 Impact factor: 41.582

5. Systematic genetic analysis with ordered arrays of yeast deletion mutants.

Authors: A H Tong; M Evangelista; A B Parsons; H Xu; G D Bader; N Pagé; M Robinson; S Raghibizadeh; C W Hogue; H Bussey; B Andrews; M Tyers; C Boone
Journal: Science Date: 2001-12-14 Impact factor: 47.728

6. Isolation of a cDNA encoding a metal response element binding protein using a novel expression cloning procedure: the one hybrid system.

Authors: C Inouye; P Remondelli; M Karin; S Elledge
Journal: DNA Cell Biol Date: 1994-07 Impact factor: 3.311

7. Interaction of Dbf4, the Cdc7 protein kinase regulatory subunit, with yeast replication origins in vivo.

Authors: S J Dowell; P Romanowski; J F Diffley
Journal: Science Date: 1994-08-26 Impact factor: 47.728

8. Next-generation sequencing to generate interactome datasets.

Authors: Haiyuan Yu; Leah Tardivo; Stanley Tam; Evan Weiner; Fana Gebreab; Changyu Fan; Nenad Svrzikapa; Tomoko Hirozane-Kishikawa; Edward Rietman; Xinping Yang; Julie Sahalie; Kourosh Salehi-Ashtiani; Tong Hao; Michael E Cusick; David E Hill; Frederick P Roth; Pascal Braun; Marc Vidal
Journal: Nat Methods Date: 2011-04-24 Impact factor: 28.547

9. A compendium of Caenorhabditis elegans regulatory transcription factors: a resource for mapping transcription regulatory networks.

Authors: John S Reece-Hoyes; Bart Deplancke; Jane Shingles; Christian A Grove; Ian A Hope; Albertha J M Walhout
Journal: Genome Biol Date: 2005-12-30 Impact factor: 13.583

10. DBD--taxonomically broad transcription factor predictions: new content and functionality.

Authors: Derek Wilson; Varodom Charoensawan; Sarah K Kummerfeld; Sarah A Teichmann
Journal: Nucleic Acids Res Date: 2007-12-11 Impact factor: 16.971

20 in total

Review 1. Small Genetic Circuits and MicroRNAs: Big Players in Polymerase II Transcriptional Control in Plants.

Authors: Molly Megraw; Jason S Cumbie; Maria G Ivanchenko; Sergei A Filichkin
Journal: Plant Cell Date: 2016-02-11 Impact factor: 11.277

2. High-Throughput Yeast One-Hybrid Screens Using a Cell Surface gLUC Reporter.

Authors: Zheng Li; Katia Bonaldi; S Earl Kang; Jose L Pruneda-Paz
Journal: Curr Protoc Plant Biol Date: 2019-02-11

3. A Modified Yeast-one Hybrid System for Heteromeric Protein Complex-DNA Interaction Studies.

Authors: Prateek Tripathi; José L Pruneda-Paz; Steve A Kay
Journal: J Vis Exp Date: 2017-07-24 Impact factor: 1.355

4. Detection of nucleic acid-protein interactions in plant leaves using fluorescence lifetime imaging microscopy.

Authors: Laurent Camborde; Alain Jauneau; Christian Brière; Laurent Deslandes; Bernard Dumas; Elodie Gaulin
Journal: Nat Protoc Date: 2017-08-24 Impact factor: 13.491

5. bfc, a novel serpent co-factor for the expression of croquemort, regulates efferocytosis in Drosophila melanogaster.

Authors: Qian Zheng; Ning Gao; Qiling Sun; Xiaowen Li; Yanzhe Wang; Hui Xiao
Journal: PLoS Genet Date: 2021-12-03 Impact factor: 5.917

6. Differential Activation of Partially Redundant Δ9 Stearoyl-ACP Desaturase Genes Is Critical for Omega-9 Monounsaturated Fatty Acid Biosynthesis During Seed Development in Arabidopsis.

Authors: Sami Kazaz; Guillaume Barthole; Frédéric Domergue; Hasna Ettaki; Alexandra To; Damien Vasselon; Delphine De Vos; Katia Belcram; Loïc Lepiniec; Sébastien Baud
Journal: Plant Cell Date: 2020-09-21 Impact factor: 11.277