Literature DB >> 22828339

Dynamical coupling of intrinsically disordered proteins and their hydration water: comparison with folded soluble and membrane proteins.

F-X Gallat1, A Laganowsky, K Wood, F Gabel, L van Eijck, J Wuttke, M Moulin, M Härtlein, D Eisenberg, J-P Colletier, G Zaccai, M Weik.   

Abstract

Hydration water is vital for various macromolecular biological activities, such as specific ligand recognition, enzyme activity, response to receptor binding, and energy transduction. Without hydration water, proteins would not fold correctly and would lack the conformational flexibility that animates their three-dimensional structures. Motions in globular, soluble proteins are thought to be governed to a certain extent by hydration-water dynamics, yet it is not known whether this relationship holds true for other protein classes in general and whether, in turn, the structural nature of a protein also influences water motions. Here, we provide insight into the coupling between hydration-water dynamics and atomic motions in intrinsically disordered proteins (IDP), a largely unexplored class of proteins that, in contrast to folded proteins, lack a well-defined three-dimensional structure. We investigated the human IDP tau, which is involved in the pathogenic processes accompanying Alzheimer disease. Combining neutron scattering and protein perdeuteration, we found similar atomic mean-square displacements over a large temperature range for the tau protein and its hydration water, indicating intimate coupling between them. This is in contrast to the behavior of folded proteins of similar molecular weight, such as the globular, soluble maltose-binding protein and the membrane protein bacteriorhodopsin, which display moderate to weak coupling, respectively. The extracted mean square displacements also reveal a greater motional flexibility of IDP compared with globular, folded proteins and more restricted water motions on the IDP surface. The results provide evidence that protein and hydration-water motions mutually affect and shape each other, and that there is a gradient of coupling across different protein classes that may play a functional role in macromolecular activity in a cellular context.
Copyright © 2012 Biophysical Society. Published by Elsevier Inc. All rights reserved.

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Year:  2012        PMID: 22828339      PMCID: PMC3388209          DOI: 10.1016/j.bpj.2012.05.027

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  52 in total

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4.  NMR relaxation studies on the hydrate layer of intrinsically unstructured proteins.

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5.  A structural model for unfolded proteins from residual dipolar couplings and small-angle x-ray scattering.

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6.  Mapping hydration dynamics around a protein surface.

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7.  Direct evidence of the amino acid side chain and backbone contributions to protein anharmonicity.

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Journal:  Rev Sci Instrum       Date:  2012-07       Impact factor: 1.523

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10.  Multiple isoforms of human microtubule-associated protein tau: sequences and localization in neurofibrillary tangles of Alzheimer's disease.

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  20 in total

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Authors:  Jonathan D Nickels; Hugh O'Neill; Liang Hong; Madhusudan Tyagi; Georg Ehlers; Kevin L Weiss; Qiu Zhang; Zheng Yi; Eugene Mamontov; Jeremy C Smith; Alexei P Sokolov
Journal:  Biophys J       Date:  2012-10-02       Impact factor: 4.033

2.  Dynamic footprint of sequestration in the molecular fluctuations of osteopontin.

Authors:  S Lenton; T Seydel; T Nylander; C Holt; M Härtlein; S Teixeira; G Zaccai
Journal:  J R Soc Interface       Date:  2015-09-06       Impact factor: 4.118

3.  The origin and impact of bound water around intrinsically disordered proteins.

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Journal:  Biophys J       Date:  2022-01-21       Impact factor: 4.033

4.  Computational Models for the Study of Protein Aggregation.

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Journal:  Methods Mol Biol       Date:  2022

5.  Nanosecond structural dynamics of intrinsically disordered β-casein micelles by neutron spectroscopy.

Authors:  Hiroshi Nakagawa; Marie-Sousai Appavou; Joachim Wuttke; Michaela Zamponi; Olaf Holderer; Tobias E Schrader; Dieter Richter; Wolfgang Doster
Journal:  Biophys J       Date:  2021-10-28       Impact factor: 4.033

6.  Physics of the Nuclear Pore Complex: Theory, Modeling and Experiment.

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Journal:  Phys Rep       Date:  2021-03-24       Impact factor: 30.510

7.  Resolution and characterization of confinement- and temperature-dependent dynamics in solvent phases that surround proteins in frozen aqueous solution by using spin-probe EPR spectroscopy.

Authors:  Wei Li; Benjamen Nforneh; Katie L Whitcomb; Kurt Warncke
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8.  Hydration water mobility is enhanced around tau amyloid fibers.

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Journal:  Proc Natl Acad Sci U S A       Date:  2015-04-27       Impact factor: 11.205

9.  Critical structural fluctuations of proteins upon thermal unfolding challenge the Lindemann criterion.

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Journal:  Proc Natl Acad Sci U S A       Date:  2017-08-14       Impact factor: 11.205

10.  Translational diffusion of hydration water correlates with functional motions in folded and intrinsically disordered proteins.

Authors:  Giorgio Schirò; Yann Fichou; Francois-Xavier Gallat; Kathleen Wood; Frank Gabel; Martine Moulin; Michael Härtlein; Matthias Heyden; Jacques-Philippe Colletier; Andrea Orecchini; Alessandro Paciaroni; Joachim Wuttke; Douglas J Tobias; Martin Weik
Journal:  Nat Commun       Date:  2015-03-16       Impact factor: 14.919

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