| Literature DB >> 22792272 |
John D Kelly1, Tim J Dudderidge, Alex Wollenschlaeger, Odu Okoturo, Keith Burling, Fiona Tulloch, Ian Halsall, Teresa Prevost, Andrew Toby Prevost, Joana C Vasconcelos, Wendy Robson, Hing Y Leung, Nikhil Vasdev, Robert S Pickard, Gareth H Williams, Kai Stoeber.
Abstract
BACKGROUND: Urinary biomarkers for bladder cancer detection are constrained by inadequate sensitivity or specificity. Here we evaluate the diagnostic accuracy of Mcm5, a novel cell cycle biomarker of aberrant growth, alone and in combination with NMP22.Entities:
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Year: 2012 PMID: 22792272 PMCID: PMC3392249 DOI: 10.1371/journal.pone.0040305
Source DB: PubMed Journal: PLoS One ISSN: 1932-6203 Impact factor: 3.240
Patient demographics and clinicopathological data.
| n | % | mean | SD | median | IQR | ||
| Patients recruited | 1677 | ||||||
| Age, years | 60.7 | 16.3 | 63 | 49–73 | |||
| Gender | Male | 1040 | 62 | ||||
| Female | 637 | 38 | |||||
| Bladder/upper tract tumor | Positive | 222 | 13 | ||||
| Negative | 1455 | 87 | |||||
| Grade | 1 | 26 | 12 | ||||
| 2 | 129 | 58 | |||||
| 3 (including CIS) | 66 | 30 | |||||
| Stage | T0 | 1455 | |||||
| Tx | 1 | ||||||
| Tis | 8 | 4 | |||||
| Ta | 122 | 55 | |||||
| T1 | 50 | 23 | |||||
| ≥T2 | 41 | 18 | |||||
| Initial referral | Non-visible haematuria | 711 | 46 | ||||
| Visible haematuria | 851 | 54 | |||||
| Unrecorded | 115 |
Abbreviations: CIS, carcinoma in situ; IQR, interquartile range; SD, standard deviation.
n = 221.
Percentage of patients excluding those with stage T0 and Tx.
Percentage of recorded cases only.
Figure 1Receiver operating characteristics curves for Mcm5 and NMP22 tests for the detection of bladder cancer in all studied patients with valid test results.
Performance of Mcm5 and NMP22 tests for bladder carcinoma detection for all patients with test results available.
| Test | Cut-point | n | Sens,% (CI) | Spec,% (CI) | PPV,% (CI) | NPV,% (CI) |
| Mcm5 | 1000-cell | 1564 | 80 (73–85) | 50 (47–52) | 20 (17–23) | 94 (92–96) |
| 2150-cell | 1564 | 69 (62–75) | 69 (66–71) | 26 (22–30) | 93 (92–95) | |
| 8500-cell | 1564 | 42 (36–49) | 95 (94–96) | 57 (49–65) | 91 (90–93) | |
| NMP22 | 10 U/ml | 1396 | 53 (46–60) | 84 (82–86) | 36 (30–42) | 92 (90–93) |
| Cytology | 1568 | 9 (5–14) | 88 (86–89) | 10 (7–15) | 87 (85–88) |
Abbreviations: CI, 95% confidence interval; NPV, negative predictive value; PPV, positive predictive value; Sens, sensitivity; Spec, specificity.
False positive rates for the Mcm5 and NMP22 tests across benign conditions.
| Test | Benign condition | n | Test value, med (IQR) | P | FPR, % | P |
| Mcm5 | Clear normal | 661 | 1040 (<1000–2645) | 30 | ||
| BPH | 132 | <1000 (<1000–2438) | 0.056 | 27 | 0.37 | |
| Calculi | 106 | 1840 (<1000–3963) | <0.001 | 44 | 0.004 | |
| Nephrological | 40 | <1000 (<1000–2448) | 0.25 | 25 | 0.47 | |
| Prostatitis | 14 | <1000 (<1000–3433) | 0.37 | 29 | 0.88 | |
| Urethral stricture | 21 | 1100 (<1000–2620) | 0.94 | 29 | 0.86 | |
| UTI | 246 | <1000 (<1000–2823) | 0.84 | 30 | 0.92 | |
| Other | 81 | 1110 (<1000–2855) | 0.68 | 28 | 0.71 | |
| NMP22 | Clear normal | 589 | 2.20 (<2.00–5.30) | 11 | ||
| BPH | 110 | <2.00 (<2.00–5.60) | 0.96 | 13 | 0.65 | |
| Calculi | 96 | 2.55 (<2.00–9.48) | 0.047 | 23 | 0.001 | |
| Nephrological | 38 | 2.05 (<2.00–6.43) | 0.93 | 11 | 0.9 | |
| Prostatitis | 13 | <2.00 (<2.00–3.50) | 0.14 | 0 | 0.2 | |
| Urethral stricture | 18 | 2.85 (<2.00–6.83) | 0.36 | 17 | 0.47 | |
| UTI | 222 | 3.35 (<2.00–8.63) | <0.001 | 22 | <0.001 | |
| Other | 68 | 2.80 (<2.00–8.03) | 0.018 | 24 | 0.004 |
For each subgroup, only those patients with a test results were considered.
Abbreviations: BPH, benign prostatic hyperplasia; FPR, false positive rate; IQR, interquartile range; med, median; UTI, urinary tract infection.
Mann-Whitney test, comparison of test value with normal.
False positive rate determined using 2150-cell cut-point for Mcm5 test and 10 U/mL cut-point for NMP22 test.
Chi-squared test, comparison of false positive rate with Normal group.
Excludes 53 “other cancers” of the 1354 patients without UCC having an Mcm5 test value.
Excludes 47 “other cancers” of the 1201 patients without UCC having an NMP22 test value.
Comparison of Mcm5 and NMP22 test performance across grade and stage.
| Test | n | Test value, med (IQR) | P | P | P | FNR, % (CI) | P | P | P | ||
| Mcm5 | Normal | 1354 | 1015 (<1000–2790) | 69 (66–71) | |||||||
| Grade | 1 | 23 | 1300 (<1000–5310) | 0.14 | 52 (31–73) | 0.085 | |||||
| 2 | 123 | 4070 (1170–12900) | <0.001 | 0.041 | 37 (28–46) | <0.001 | 0.16 | ||||
| 3 | 55 | 40900 (5800–122000) | <0.001 | <0.001 | <0.001 | 11 (4–22) | <0.001 | <0.001 | <0.001 | ||
| Stage | pTa | 115 | 2590 (<1000–5710) | <0.001 | 46 (37–56) | <0.001 | |||||
| pT1 | 48 | 39000 (5818–136250) | <0.001 | <0.001 | 10 (3–23) | <0.001 | <0.001 | ||||
| ≥pT2 | 38 | 19850 (7150–65800) | <0.001 | 0.28 | <0.001 | 13 (4–28) | <0.001 | 0.69 | <0.001 | ||
| NMP22 | Normal | 1201 | 2.40 (<2.00–6.30) | 84 (82–86) | |||||||
| Grade | 1 | 25 | <2.00 (<2.00–8.45) | 0.31 | 80 (59–93) | 0.55 | |||||
| 2 | 112 | 10.20 (2.68–39.83) | <0.001 | <0.001 | 49 (40–59) | <0.001 | 0.005 | ||||
| 3 | 51 | 62.50 (9.90–145.50) | <0.001 | <0.001 | <0.001 | 25 (14–40) | <0.001 | 0.005 | <0.001 | ||
| Stage | pTa | 109 | 6.00 (<2.00–24.50) | <0.001 | 62 (53–71) | <0.001 | |||||
| pT1 | 45 | 31.30 (5.70–125.90) | <0.001 | <0.001 | 29 (16–44) | <0.001 | <0.001 | ||||
| ≥pT2 | 34 | 70.65 (22.68–258.50) | <0.001 | 0.099 | <0.001 | 21 (9–38) | <0.001 | 0.40 | <0.001 |
Abbreviations: CI, 95% confidence interval; IQR, interquartile range; med, median; FNR, false negative rate.
Mann-Whitney test (for Test value) or Chi-squared test (for FNR), comparison with Normal group.
Mann-Whitney test (for Test value) or Chi-squared test (for FNR), comparison with previous, i.e. Grade 2 vs Grade 1, Grade 3 vs Grade 2.
Jonckheere-Terpstra test for trend (for Test value) or Chi-squared test for linear by linear association, across Grade or Stage, excluding Normal group.
Data analysis using 2150-cell cut-point for Mcm5 test.
Excludes 8 CIS and 1 adenocarcinoma from 210 UCC cases having an MCM5 test value.
Data analysis using 10 U/mL cut-point for NMP22 test.
Excludes 7 CIS from the 195 UCC cases having an NMP22 test value.