Literature DB >> 22749015

Rapid and cost-effective gene targeting in rat embryonic stem cells by TALENs.

Chang Tong1, Guanyi Huang, Charles Ashton, Hongping Wu, Hexin Yan, Qi-Long Ying.   

Abstract

The rat is the preferred animal model in many areas of biomedical research and drug development. Genetic manipulation in rats has lagged behind that in mice due to the lack of efficient gene targeting tools. Previously, we generated a knockout rat via conventional homologous recombination in rat embryonic stem (ES) cells. Here, we show that efficient gene targeting in rat ES cells can be achieved quickly through transcription activator-like effector nuclease (TALEN)-mediated DNA double-strand breaks. Using the Golden Gate cloning technique, we constructed a pair of TALEN targeting vectors for the gene of interest in 5 days. After gene transfection, the targeted rat ES cell colonies were isolated, screened, and confirmed by PCR without the need of drug selection. Our results suggest that TALEN-mediated gene targeting is a superior means of establishing genetically modified rat ES cell lines with high efficiency and short turnaround time.
Copyright © 2012. Published by Elsevier Ltd.

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Year:  2012        PMID: 22749015      PMCID: PMC3856761          DOI: 10.1016/j.jgg.2012.04.004

Source DB:  PubMed          Journal:  J Genet Genomics        ISSN: 1673-8527            Impact factor:   4.275


  16 in total

1.  Transposon-tagged mutagenesis in the rat.

Authors:  Kazuhiro Kitada; Satoshi Ishishita; Keiko Tosaka; Ri-ichi Takahashi; Masatsugu Ueda; Vincent W Keng; Kyoji Horie; Junji Takeda
Journal:  Nat Methods       Date:  2007-01-14       Impact factor: 28.547

2.  A simple cipher governs DNA recognition by TAL effectors.

Authors:  Matthew J Moscou; Adam J Bogdanove
Journal:  Science       Date:  2009-12-11       Impact factor: 47.728

3.  Knockout rats generated by embryo microinjection of TALENs.

Authors:  Laurent Tesson; Claire Usal; Séverine Ménoret; Elo Leung; Brett J Niles; Séverine Remy; Yolanda Santiago; Anna I Vincent; Xiangdong Meng; Lei Zhang; Philip D Gregory; Ignacio Anegon; Gregory J Cost
Journal:  Nat Biotechnol       Date:  2011-08-05       Impact factor: 54.908

4.  Production of p53 gene knockout rats by homologous recombination in embryonic stem cells.

Authors:  Chang Tong; Ping Li; Nancy L Wu; Youzhen Yan; Qi-Long Ying
Journal:  Nature       Date:  2010-08-11       Impact factor: 49.962

5.  Breaking the code of DNA binding specificity of TAL-type III effectors.

Authors:  Jens Boch; Heidi Scholze; Sebastian Schornack; Angelika Landgraf; Simone Hahn; Sabine Kay; Thomas Lahaye; Anja Nickstadt; Ulla Bonas
Journal:  Science       Date:  2009-12-11       Impact factor: 47.728

6.  Knockout rats via embryo microinjection of zinc-finger nucleases.

Authors:  Aron M Geurts; Gregory J Cost; Yevgeniy Freyvert; Bryan Zeitler; Jeffrey C Miller; Vivian M Choi; Shirin S Jenkins; Adam Wood; Xiaoxia Cui; Xiangdong Meng; Anna Vincent; Stephen Lam; Mieczyslaw Michalkiewicz; Rebecca Schilling; Jamie Foeckler; Shawn Kalloway; Hartmut Weiler; Séverine Ménoret; Ignacio Anegon; Gregory D Davis; Lei Zhang; Edward J Rebar; Philip D Gregory; Fyodor D Urnov; Howard J Jacob; Roland Buelow
Journal:  Science       Date:  2009-07-24       Impact factor: 47.728

7.  The knockout mouse project.

Authors:  Christopher P Austin; James F Battey; Allan Bradley; Maja Bucan; Mario Capecchi; Francis S Collins; William F Dove; Geoffrey Duyk; Susan Dymecki; Janan T Eppig; Franziska B Grieder; Nathaniel Heintz; Geoff Hicks; Thomas R Insel; Alexandra Joyner; Beverly H Koller; K C Kent Lloyd; Terry Magnuson; Mark W Moore; Andras Nagy; Jonathan D Pollock; Allen D Roses; Arthur T Sands; Brian Seed; William C Skarnes; Jay Snoddy; Philippe Soriano; David J Stewart; Francis Stewart; Bruce Stillman; Harold Varmus; Lyuba Varticovski; Inder M Verma; Thomas F Vogt; Harald von Melchner; Jan Witkowski; Richard P Woychik; Wolfgang Wurst; George D Yancopoulos; Stephen G Young; Brian Zambrowicz
Journal:  Nat Genet       Date:  2004-09       Impact factor: 38.330

8.  Production of knockout rats using ENU mutagenesis and a yeast-based screening assay.

Authors:  Yunhong Zan; Jill D Haag; Kai-Shun Chen; Laurie A Shepel; Don Wigington; Yu-Rong Wang; Rong Hu; Christine C Lopez-Guajardo; Heidi L Brose; Katherine I Porter; Rachel A Leonard; Andrew A Hitt; Stacy L Schommer; Anu F Elegbede; Michael N Gould
Journal:  Nat Biotechnol       Date:  2003-05-18       Impact factor: 54.908

9.  Germline competent embryonic stem cells derived from rat blastocysts.

Authors:  Ping Li; Chang Tong; Ruty Mehrian-Shai; Li Jia; Nancy Wu; Youzhen Yan; Robert E Maxson; Eric N Schulze; Houyan Song; Chih-Lin Hsieh; Martin F Pera; Qi-Long Ying
Journal:  Cell       Date:  2008-12-26       Impact factor: 41.582

10.  Golden gate shuffling: a one-pot DNA shuffling method based on type IIs restriction enzymes.

Authors:  Carola Engler; Ramona Gruetzner; Romy Kandzia; Sylvestre Marillonnet
Journal:  PLoS One       Date:  2009-05-14       Impact factor: 3.240

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  31 in total

Review 1.  Tell me a tale of TALEs.

Authors:  Alejandra Muñoz Bodnar; Adriana Bernal; Boris Szurek; Camilo E López
Journal:  Mol Biotechnol       Date:  2013-02       Impact factor: 2.695

2.  Rapid and efficient gene modification in rice and Brachypodium using TALENs.

Authors:  Qiwei Shan; Yanpeng Wang; Kunling Chen; Zhen Liang; Jun Li; Yi Zhang; Kang Zhang; Jinxing Liu; Daniel F Voytas; Xuelian Zheng; Yong Zhang; Caixia Gao
Journal:  Mol Plant       Date:  2013-01-02       Impact factor: 13.164

3.  Insertional mutagenesis by a hybrid piggyBac and sleeping beauty transposon in the rat.

Authors:  Kenryo Furushima; Chuan-Wei Jang; Diane W Chen; Ningna Xiao; Paul A Overbeek; Richard R Behringer
Journal:  Genetics       Date:  2012-09-28       Impact factor: 4.562

4.  Assessing Accumulation of Organic Material on Rodent Cage Accessories.

Authors:  Kenneth P Allen; Tarrant J Csida; Joseph D Thulin
Journal:  J Am Assoc Lab Anim Sci       Date:  2021-03-05       Impact factor: 1.232

Review 5.  2015 Guidelines for Establishing Genetically Modified Rat Models for Cardiovascular Research.

Authors:  Michael J Flister; Jeremy W Prokop; Jozef Lazar; Mary Shimoyama; Melinda Dwinell; Aron Geurts
Journal:  J Cardiovasc Transl Res       Date:  2015-04-29       Impact factor: 4.132

6.  Mutagenesis at specific genomic loci of amphioxus Branchiostoma belcheri using TALEN method.

Authors:  Guang Li; Jun Feng; Yong Lei; Jing Wang; Hui Wang; Liü-Ke Shang; Dong-Teng Liu; Hui Zhao; Yong Zhu; Yi-Quan Wang
Journal:  J Genet Genomics       Date:  2014-03-18       Impact factor: 4.275

7.  Genome modification leads to phenotype reversal in human myotonic dystrophy type 1 induced pluripotent stem cell-derived neural stem cells.

Authors:  Guangbin Xia; Yuanzheng Gao; Shouguang Jin; S H Subramony; Naohiro Terada; Laura P W Ranum; Maurice S Swanson; Tetsuo Ashizawa
Journal:  Stem Cells       Date:  2015-06       Impact factor: 6.277

Review 8.  Stem cells and modeling of autism spectrum disorders.

Authors:  Beatriz C G Freitas; Cleber A Trujillo; Cassiano Carromeu; Marianna Yusupova; Roberto H Herai; Alysson R Muotri
Journal:  Exp Neurol       Date:  2012-10-02       Impact factor: 5.330

Review 9.  Genetic regulation of bone strength: a review of animal model studies.

Authors:  Douglas J Adams; Cheryl L Ackert-Bicknell
Journal:  Bonekey Rep       Date:  2015-07-08

10.  TAL effector nucleases induce mutations at a pre-selected location in the genome of primary barley transformants.

Authors:  Toni Wendt; Preben Bach Holm; Colby G Starker; Michelle Christian; Daniel F Voytas; Henrik Brinch-Pedersen; Inger Bæksted Holme
Journal:  Plant Mol Biol       Date:  2013-05-21       Impact factor: 4.076

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