Literature DB >> 22590243

3-(Adamantan-1-yl)-4-ethyl-1H-1,2,4-triazole-5(4H)-thione.

Ali A El-Emam, Nasser R El-Brollosy, Hazem A Ghabbour, Ching Kheng Quah, Hoong-Kun Fun.   

Abstract

In the title compound, C(14)H(21)N(3)S, the 1,2,4-triazole ring is nearly planar, with a maximum deviation of 0.003 (4) Å. In the crystal, mol-ecules are linked into inversion dimers by pairs of N-H⋯S hydrogen bonds.

Entities:  

Year:  2012        PMID: 22590243      PMCID: PMC3344481          DOI: 10.1107/S1600536812014407

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the biological activity of adamantane derivatives, see: Al-Omar et al. (2010 ▶); Al-Deeb et al. (2006 ▶); El-Emam et al. (2004 ▶); Kadi et al. (2007 ▶, 2010 ▶); Vernier et al. (1969 ▶). For the synthesis of the title compound, see: El-Emam & Ibrahim (1991 ▶). For related structures of adamantane derivatives, see: Almutairi et al. (2012 ▶); Al-Tamimi et al. (2010 ▶); Rouchal et al. (2010 ▶); Wang et al. (2011 ▶); Al-Abdullah et al. (2012 ▶). For standard bond-length data, see: Allen et al. (1987 ▶).

Experimental

Crystal data

C14H21N3S M = 263.40 Monoclinic, a = 13.8329 (7) Å b = 7.3107 (4) Å c = 17.5302 (12) Å β = 128.157 (4)° V = 1393.99 (16) Å3 Z = 4 Cu Kα radiation μ = 1.94 mm−1 T = 296 K 0.58 × 0.12 × 0.05 mm

Data collection

Bruker SMART APEXII CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2009 ▶) T min = 0.228, T max = 0.906 8009 measured reflections 2448 independent reflections 1632 reflections with I > 2σ(I) R int = 0.093

Refinement

R[F 2 > 2σ(F 2)] = 0.062 wR(F 2) = 0.167 S = 1.13 2448 reflections 168 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.19 e Å−3 Δρmin = −0.26 e Å−3 Data collection: APEX2 (Bruker, 2009 ▶); cell refinement: SAINT (Bruker, 2009 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL and PLATON (Spek, 2009 ▶). Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536812014407/is5108sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812014407/is5108Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536812014407/is5108Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C14H21N3SF(000) = 568
Mr = 263.40Dx = 1.255 Mg m3
Monoclinic, P21/cCu Kα radiation, λ = 1.54178 Å
Hall symbol: -P 2ybcCell parameters from 592 reflections
a = 13.8329 (7) Åθ = 4.1–66.5°
b = 7.3107 (4) ŵ = 1.94 mm1
c = 17.5302 (12) ÅT = 296 K
β = 128.157 (4)°Needle, colourless
V = 1393.99 (16) Å30.58 × 0.12 × 0.05 mm
Z = 4
Bruker SMART APEXII CCD area-detector diffractometer2448 independent reflections
Radiation source: fine-focus sealed tube1632 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.093
φ and ω scansθmax = 67.5°, θmin = 4.1°
Absorption correction: multi-scan (SADABS; Bruker, 2009)h = −16→16
Tmin = 0.228, Tmax = 0.906k = −8→6
8009 measured reflectionsl = −20→19
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.062Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.167H atoms treated by a mixture of independent and constrained refinement
S = 1.13w = 1/[σ2(Fo2) + (0.0553P)2 + 1.0409P] where P = (Fo2 + 2Fc2)/3
2448 reflections(Δ/σ)max = 0.001
168 parametersΔρmax = 0.19 e Å3
0 restraintsΔρmin = −0.26 e Å3
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
S1−0.10923 (11)0.88672 (13)0.05119 (8)0.0602 (4)
N10.0606 (3)0.6128 (4)0.1520 (2)0.0452 (7)
N20.0957 (4)0.7839 (4)0.0738 (3)0.0591 (10)
N30.1903 (3)0.6609 (4)0.1203 (2)0.0571 (9)
C10.0152 (4)0.7606 (4)0.0913 (3)0.0490 (10)
C20.1677 (4)0.5561 (5)0.1684 (3)0.0479 (9)
C30.2544 (4)0.4078 (5)0.2347 (3)0.0505 (9)
C40.3537 (4)0.3859 (5)0.2218 (4)0.0733 (13)
H4A0.39540.50180.23450.088*
H4B0.31580.35090.15540.088*
C50.4475 (5)0.2398 (6)0.2914 (5)0.0821 (15)
H5A0.51040.22840.28220.099*
C60.5089 (5)0.2972 (7)0.3961 (5)0.0953 (18)
H6A0.56950.20680.44060.114*
H6B0.55040.41360.40960.114*
C70.4113 (4)0.3141 (6)0.4098 (3)0.0710 (12)
H7A0.45020.34810.47710.085*
C80.3435 (4)0.1329 (5)0.3865 (3)0.0660 (12)
H8A0.28100.14550.39510.079*
H8B0.40090.03910.43070.079*
C90.2836 (4)0.0760 (5)0.2820 (3)0.0587 (11)
H9A0.2415−0.04140.26820.070*
C100.1908 (4)0.2214 (5)0.2139 (3)0.0524 (10)
H10A0.12790.23120.22230.063*
H10B0.15120.18620.14730.063*
C110.3813 (5)0.0576 (6)0.2681 (4)0.0781 (14)
H11A0.34330.02310.20160.094*
H11B0.4397−0.03690.31060.094*
C120.3189 (4)0.4605 (5)0.3421 (3)0.0595 (11)
H12A0.36070.57680.35640.071*
H12B0.25790.47390.35230.071*
C13−0.0034 (4)0.5359 (5)0.1871 (3)0.0486 (9)
H13A−0.03750.63500.20060.058*
H13B0.05530.47100.24740.058*
C14−0.1058 (4)0.4064 (5)0.1148 (3)0.0577 (10)
H14A−0.14850.36640.13890.087*
H14B−0.07170.30240.10560.087*
H14C−0.16220.46820.05400.087*
H1N20.089 (3)0.868 (5)0.035 (3)0.063 (12)*
U11U22U33U12U13U23
S10.0812 (8)0.0444 (6)0.0664 (7)0.0174 (5)0.0513 (6)0.0157 (4)
N10.060 (2)0.0367 (15)0.0490 (17)0.0075 (14)0.0389 (16)0.0066 (12)
N20.088 (3)0.0436 (19)0.069 (2)0.0136 (17)0.060 (2)0.0182 (16)
N30.076 (2)0.0419 (17)0.074 (2)0.0115 (16)0.057 (2)0.0146 (15)
C10.071 (3)0.0329 (18)0.048 (2)0.0057 (17)0.039 (2)0.0031 (15)
C20.064 (3)0.0383 (19)0.053 (2)0.0010 (17)0.042 (2)0.0002 (15)
C30.059 (3)0.040 (2)0.064 (2)0.0053 (17)0.043 (2)0.0074 (16)
C40.086 (3)0.051 (2)0.120 (4)0.012 (2)0.082 (3)0.020 (2)
C50.074 (3)0.062 (3)0.140 (5)0.022 (2)0.080 (4)0.029 (3)
C60.061 (3)0.071 (3)0.127 (5)0.005 (3)0.045 (3)0.025 (3)
C70.055 (3)0.064 (3)0.068 (3)−0.004 (2)0.025 (2)0.005 (2)
C80.053 (3)0.057 (3)0.070 (3)0.007 (2)0.029 (2)0.023 (2)
C90.061 (3)0.037 (2)0.078 (3)0.0047 (18)0.043 (2)0.0093 (18)
C100.062 (3)0.044 (2)0.055 (2)0.0045 (18)0.038 (2)0.0048 (16)
C110.081 (3)0.052 (3)0.118 (4)0.022 (2)0.070 (3)0.020 (3)
C120.060 (3)0.045 (2)0.063 (3)−0.0037 (18)0.032 (2)0.0001 (18)
C130.065 (3)0.043 (2)0.052 (2)0.0083 (18)0.043 (2)0.0071 (16)
C140.060 (3)0.049 (2)0.067 (3)−0.0003 (19)0.041 (2)−0.0006 (18)
S1—C11.677 (4)C7—C121.521 (5)
N1—C11.367 (4)C7—C81.526 (5)
N1—C21.386 (5)C7—H7A0.9800
N1—C131.468 (4)C8—C91.530 (6)
N2—C11.337 (5)C8—H8A0.9700
N2—N31.366 (4)C8—H8B0.9700
N2—H1N20.87 (4)C9—C101.520 (5)
N3—C21.312 (4)C9—C111.522 (6)
C2—C31.497 (5)C9—H9A0.9800
C3—C41.533 (5)C10—H10A0.9700
C3—C101.539 (5)C10—H10B0.9700
C3—C121.553 (5)C11—H11A0.9700
C4—C51.535 (6)C11—H11B0.9700
C4—H4A0.9700C12—H12A0.9700
C4—H4B0.9700C12—H12B0.9700
C5—C111.522 (6)C13—C141.514 (5)
C5—C61.530 (7)C13—H13A0.9700
C5—H5A0.9800C13—H13B0.9700
C6—C71.515 (7)C14—H14A0.9600
C6—H6A0.9700C14—H14B0.9600
C6—H6B0.9700C14—H14C0.9600
C1—N1—C2108.5 (3)C7—C8—C9110.2 (3)
C1—N1—C13121.5 (3)C7—C8—H8A109.6
C2—N1—C13130.0 (3)C9—C8—H8A109.6
C1—N2—N3113.9 (3)C7—C8—H8B109.6
C1—N2—H1N2124 (3)C9—C8—H8B109.6
N3—N2—H1N2122 (3)H8A—C8—H8B108.1
C2—N3—N2104.3 (3)C10—C9—C11109.8 (3)
N2—C1—N1103.4 (3)C10—C9—C8108.7 (3)
N2—C1—S1128.2 (3)C11—C9—C8109.8 (4)
N1—C1—S1128.3 (3)C10—C9—H9A109.5
N3—C2—N1109.9 (3)C11—C9—H9A109.5
N3—C2—C3121.8 (3)C8—C9—H9A109.5
N1—C2—C3128.2 (3)C9—C10—C3110.6 (3)
C2—C3—C4108.8 (3)C9—C10—H10A109.5
C2—C3—C10113.0 (3)C3—C10—H10A109.5
C4—C3—C10107.9 (3)C9—C10—H10B109.5
C2—C3—C12110.2 (3)C3—C10—H10B109.5
C4—C3—C12108.0 (3)H10A—C10—H10B108.1
C10—C3—C12108.8 (3)C9—C11—C5109.0 (3)
C3—C4—C5110.5 (3)C9—C11—H11A109.9
C3—C4—H4A109.6C5—C11—H11A109.9
C5—C4—H4A109.6C9—C11—H11B109.9
C3—C4—H4B109.6C5—C11—H11B109.9
C5—C4—H4B109.6H11A—C11—H11B108.3
H4A—C4—H4B108.1C7—C12—C3110.3 (3)
C11—C5—C6111.0 (4)C7—C12—H12A109.6
C11—C5—C4108.8 (4)C3—C12—H12A109.6
C6—C5—C4109.4 (4)C7—C12—H12B109.6
C11—C5—H5A109.2C3—C12—H12B109.6
C6—C5—H5A109.2H12A—C12—H12B108.1
C4—C5—H5A109.2N1—C13—C14112.5 (3)
C7—C6—C5108.9 (4)N1—C13—H13A109.1
C7—C6—H6A109.9C14—C13—H13A109.1
C5—C6—H6A109.9N1—C13—H13B109.1
C7—C6—H6B109.9C14—C13—H13B109.1
C5—C6—H6B109.9H13A—C13—H13B107.8
H6A—C6—H6B108.3C13—C14—H14A109.5
C6—C7—C12109.6 (4)C13—C14—H14B109.5
C6—C7—C8110.4 (4)H14A—C14—H14B109.5
C12—C7—C8108.7 (3)C13—C14—H14C109.5
C6—C7—H7A109.4H14A—C14—H14C109.5
C12—C7—H7A109.4H14B—C14—H14C109.5
C8—C7—H7A109.4
C1—N2—N3—C20.3 (4)C11—C5—C6—C7−59.4 (5)
N3—N2—C1—N1−0.6 (4)C4—C5—C6—C760.7 (5)
N3—N2—C1—S1177.7 (3)C5—C6—C7—C12−61.3 (5)
C2—N1—C1—N20.6 (4)C5—C6—C7—C858.3 (5)
C13—N1—C1—N2−178.0 (3)C6—C7—C8—C9−58.9 (5)
C2—N1—C1—S1−177.7 (3)C12—C7—C8—C961.4 (5)
C13—N1—C1—S13.8 (5)C7—C8—C9—C10−61.4 (4)
N2—N3—C2—N10.1 (4)C7—C8—C9—C1158.8 (4)
N2—N3—C2—C3−176.4 (3)C11—C9—C10—C3−60.1 (4)
C1—N1—C2—N3−0.4 (4)C8—C9—C10—C360.0 (4)
C13—N1—C2—N3177.9 (3)C2—C3—C10—C9178.9 (3)
C1—N1—C2—C3175.8 (3)C4—C3—C10—C958.6 (4)
C13—N1—C2—C3−5.9 (6)C12—C3—C10—C9−58.3 (4)
N3—C2—C3—C4−8.8 (5)C10—C9—C11—C560.7 (5)
N1—C2—C3—C4175.4 (4)C8—C9—C11—C5−58.8 (5)
N3—C2—C3—C10−128.6 (4)C6—C5—C11—C959.8 (5)
N1—C2—C3—C1055.6 (5)C4—C5—C11—C9−60.7 (5)
N3—C2—C3—C12109.5 (4)C6—C7—C12—C361.0 (5)
N1—C2—C3—C12−66.3 (5)C8—C7—C12—C3−59.7 (5)
C2—C3—C4—C5177.9 (4)C2—C3—C12—C7−177.4 (3)
C10—C3—C4—C5−59.2 (5)C4—C3—C12—C7−58.7 (4)
C12—C3—C4—C558.2 (5)C10—C3—C12—C758.2 (4)
C3—C4—C5—C1161.2 (5)C1—N1—C13—C1482.7 (4)
C3—C4—C5—C6−60.3 (5)C2—N1—C13—C14−95.5 (4)
D—H···AD—HH···AD···AD—H···A
N2—H1N2···S1i0.88 (4)2.47 (4)3.338 (4)170 (4)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N2—H1N2⋯S1i0.88 (4)2.47 (4)3.338 (4)170 (4)

Symmetry code: (i) .

  12 in total

1.  The toxicologic and pharmacologic properties of amantadine hydrochloride.

Authors:  V G Vernier; J B Harmon; J M Stump; T E Lynes; J P Marvel; D H Smith
Journal:  Toxicol Appl Pharmacol       Date:  1969-11       Impact factor: 4.219

2.  Synthesis, antimicrobial and anti-inflammatory activities of novel 5-(1-adamantyl)-1,3,4-thiadiazole derivatives.

Authors:  Adnan A Kadi; Ebtehal S Al-Abdullah; Ihsan A Shehata; Elsayed E Habib; Tarek M Ibrahim; Ali A El-Emam
Journal:  Eur J Med Chem       Date:  2010-08-12       Impact factor: 6.514

3.  Synthesis, antimicrobial, and anti-HIV-1 activity of certain 5-(1-adamantyl)-2-substituted thio-1,3,4-oxadiazoles and 5-(1-adamantyl)-3-substituted aminomethyl-1,3,4-oxadiazoline-2-thiones.

Authors:  Ali A El-Emam; Omar A Al-Deeb; Mohamed Al-Omar; Jochen Lehmann
Journal:  Bioorg Med Chem       Date:  2004-10-01       Impact factor: 3.641

4.  Synthesis and anti-inflammatory and analgesic activity of some 3-(1-adamantyl)-4-substituted-5-mercapto-1,2,4-triazoles.

Authors:  A A el-Emam; T M Ibrahim
Journal:  Arzneimittelforschung       Date:  1991-12

5.  1-(2-Phenyl-eth-yl)adamantane.

Authors:  Michal Rouchal; Marek Nečas; Robert Vícha
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-06-23

6.  rac-4-Amino-1-(2-benzoyl-1-phenyl-eth-yl)-3-methyl-1H-1,2,4-triazole-5(4H)-thione.

Authors:  Wei Wang; Yan Gao; Zuo-Bing Xiao; Hong-Guo Yao; Jing-Jing Zhang
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-01-12

7.  3-(Adamantan-1-yl)-4-(prop-2-en-1-yl)-1H-1,2,4-triazole-5(4H)-thione.

Authors:  Maha S Almutairi; Mona M Al-Shehri; Ali A El-Emam; Seik Weng Ng; Edward R T Tiekink
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-02-10

8.  Ethyl 4-{[3-(adamantan-1-yl)-4-phenyl-5-sulfanyl-idene-4,5-dihydro-1H-1,2,4-triazol-1-yl]meth-yl}piperazine-1-carboxyl-ate.

Authors:  Ebtehal S Al-Abdullah; Hanadi H Asiri; Ali A El-Emam; Seik Weng Ng
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-01-31

9.  Synthesis, antimicrobial, and anti-inflammatory activities of novel 5-(1-adamantyl)-4-arylideneamino-3-mercapto-1,2,4-triazoles and related derivatives.

Authors:  Mohamed A Al-Omar; Ebtehal S Al-Abdullah; Ihsan A Shehata; Elsayed E Habib; Tarek M Ibrahim; Ali A El-Emam
Journal:  Molecules       Date:  2010-04-09       Impact factor: 4.411

10.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20
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  3 in total

1.  N-(Adamantan-1-yl)-1,2,3,4-tetra-hydro-iso-quinoline-2-carbo-thio-amide.

Authors:  Ali A El-Emam; Ebtehal S Al-Abdullah; Hanaa M Al-Tuwaijri; C S Chidan Kumar; Hoong-Kun Fun
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2013-11-23

2.  Crystal structure of 3-(adamantan-1-yl)-4-(4-chloro-phen-yl)-1H-1,2,4-triazole-5(4H)-thione.

Authors:  Reem I Al-Wabli; Ali A El-Emam; Obaid S Alroqi; C S Chidan Kumar; Hoong-Kun Fun
Journal:  Acta Crystallogr E Crystallogr Commun       Date:  2015-01-17

3.  3-(Adamantan-1-yl)-4-benzyl-1H-1,2,4-triazole-5(4H)-thione.

Authors:  Fatmah A M Al-Omary; Hazem A Ghabbour; Ali A El-Emam; C S Chidan Kumar; Hoong-Kun Fun
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2014-06-14
  3 in total

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