Literature DB >> 22584910

Genetic study of 12 X-STRs in Malay population living in and around Kuala Lumpur using Investigator Argus X-12 kit.

Michinaga Samejima1, Yasutaka Nakamura, Phrabhakaran Nambiar, Kiyoshi Minaguchi.   

Abstract

We investigated 12 X-chromosomal short tandem repeat (STR) polymorphisms in 283 unrelated Malay individuals (160 males and 123 females) living in and around Kuala Lumpur using the Investigator Argus X-12 kit. Heterozygosity among the present 12 X-STRs showed a distribution of from 55.3 to 93.5 %. The diversity values of the haplotypes constructed using four closely linked groups were all higher than 0.9865. A comparison of allelic frequency in each system and haplotype variation indicated that the nature of these X-STRs in the Malay population differed from that in East Asian, European, or African populations. Several microvariant alleles found in the Malay population were characterized and compared with known sequence data. The present data may be helpful in forensic casework such as personal identification and kinship testing in the Malay population in Malaysia.

Mesh:

Year:  2012        PMID: 22584910     DOI: 10.1007/s00414-012-0705-7

Source DB:  PubMed          Journal:  Int J Legal Med        ISSN: 0937-9827            Impact factor:   2.686


  21 in total

1.  An X-chromosome pentaplex in two linkage groups: haplotype data in Alagoas and Rio de Janeiro populations from Brazil.

Authors:  Iede H Ferreira da Silva; Adriana G Barbosa; Dalmo A Azevedo; Paula Sánchez-Diz; Leonor Gusmão; Celso C Tavares; Elizeu F Carvalho; Luiz Antonio Ferreira da Silva
Journal:  Forensic Sci Int Genet       Date:  2009-09-01       Impact factor: 4.882

2.  Linkage and linkage disequilibrium analysis of X-STRs in Italian families.

Authors:  Serena Inturri; Silvia Menegon; Antonio Amoroso; Carlo Torre; Carlo Robino
Journal:  Forensic Sci Int Genet       Date:  2010-11-18       Impact factor: 4.882

3.  DXS10079, DXS10074 and DXS10075 are STRs located within a 280-kb region of Xq12 and provide stable haplotypes useful for complex kinship cases.

Authors:  Sandra Hering; Christa Augustin; Jeanett Edelmann; Micaela Heidel; Jan Dressler; Heike Rodig; Eberhard Kuhlisch; Reinhard Szibor
Journal:  Int J Legal Med       Date:  2005-12-13       Impact factor: 2.686

4.  Population genetic evaluation of eight X-chromosomal short tandem repeat loci using Mentype Argus X-8 PCR amplification kit.

Authors:  Dorit Becker; Heike Rodig; Christa Augustin; Jeanett Edelmann; Frank Götz; Sandra Hering; Reinhard Szibor; Werner Brabetz
Journal:  Forensic Sci Int Genet       Date:  2007-09-29       Impact factor: 4.882

5.  The STR cluster DXS10148-DXS8378-DXS10135 provides a powerful tool for X-chromosomal haplotyping at Xp22.

Authors:  Tanja Hundertmark; Sandra Hering; Jeanett Edelmann; Christa Augustin; Ines Plate; Reinhard Szibor
Journal:  Int J Legal Med       Date:  2008-08-08       Impact factor: 2.686

6.  Characteristics of eight X-STR loci for forensic purposes in the Chinese population.

Authors:  Hai-bo Luo; Yi Ye; Yan-yun Wang; Wei-bo Liang; Li-bing Yun; Miao Liao; Jing Yan; Jin Wu; Ying-bi Li; Yi-ping Hou
Journal:  Int J Legal Med       Date:  2009-11-19       Impact factor: 2.686

7.  Genetic polymorphisms of twelve X-chromosomal STR loci in Chinese Han population from Guangdong Province.

Authors:  Xiang-pei Zeng; Zheng Ren; Jian-ding Chen; De-jian Lv; Da-yue Tong; Hua Chen; Hong-yu Sun
Journal:  Forensic Sci Int Genet       Date:  2011-04-03       Impact factor: 4.882

8.  Analysis of 21 X-chromosomal STRs in an Algerian population sample.

Authors:  Asmahan Bekada; Soraya Benhamamouch; Abdallah Boudjema; Mustapha Fodil; Silvia Menegon; Carlo Torre; Carlo Robino
Journal:  Int J Legal Med       Date:  2009-12-11       Impact factor: 2.686

9.  Hungarian population data of eight X-linked markers in four linkage groups.

Authors:  Andrea Zalán; Antónia Völgyi; Werner Brabetz; Dorit Schleinitz; Horolma Pamjav
Journal:  Forensic Sci Int       Date:  2007-06-22       Impact factor: 2.395

10.  Validation of six closely linked STRs located in the chromosome X centromere region.

Authors:  Jeanett Edelmann; Sandra Hering; Christa Augustin; Stefan Kalis; Reinhard Szibor
Journal:  Int J Legal Med       Date:  2009-02-20       Impact factor: 2.686

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  11 in total

1.  Genetic variation study of 12 X chromosomal STR in central Thailand population.

Authors:  Kornkiat Vongpaisarnsin; Achara Boonlert; Kawin Rasmeepaisarn; Piyawan Dangkao
Journal:  Int J Legal Med       Date:  2016-04-08       Impact factor: 2.686

2.  Population data and genetic characteristics of 12 X-STR loci using the Investigator® Argus X-12 Quality Sensor kit for the Kedayan population of Borneo in Malaysia.

Authors:  Hashom Mohd Hakim; Hussein Omar Khan; Siti Afifah Ismail; Japareng Lalung; Abban Edward Kofi; Mohd Yusmaidie Aziz; Siddhartha Pati; Bryan Raveen Nelson; Geoffrey Keith Chambers; Hisham Atan Edinur
Journal:  Int J Legal Med       Date:  2021-03-30       Impact factor: 2.686

3.  Analysis of four novel X-chromosomal short tandem repeats within 71 kb of the Xp22.3 region.

Authors:  Takeki Nishi; Kenji Fukui; Kimiharu Iwadate
Journal:  Int J Legal Med       Date:  2017-02-27       Impact factor: 2.686

4.  X-chromosome STR markers data in a Cabo Verde immigrant population of Lisboa.

Authors:  Heloísa Afonso Costa; Paulo Morais; Cláudia Vieira da Silva; Sara Matos; Rodolfo Marques Santos; Rosa Espinheira; Jorge Costa Santos; António Amorim
Journal:  Mol Biol Rep       Date:  2014-01-29       Impact factor: 2.316

5.  Genetic polymorphism analyses of a novel panel of 19 X-STR loci in the Chinese Uygur ethnic minority.

Authors:  Yu-Xin Guo; Jian-Gang Chen; Yan Wang; Jiang-Wei Yan; Jing Chen; Tian-Hua Yao; Li-Ping Zhang; Guang Yang; Hao-Tian Meng; Yu-Dang Zhang; Ting Mei; Yao-Shun Liu; Qian Dong; Bo-Feng Zhu
Journal:  J Zhejiang Univ Sci B       Date:  2016-05       Impact factor: 3.066

6.  Development of a 16 X-STR multiplex PCR system for kinship analysis and its applicability for the Sinhalese population in Sri Lanka.

Authors:  Nandika Perera; Gayani Galhena; Gaya Ranawaka
Journal:  Int J Legal Med       Date:  2020-11-02       Impact factor: 2.686

7.  X-chromosomal STR-based genetic structure of Sichuan Tibetan minority ethnicity group and its relationships to various groups.

Authors:  Guanglin He; Ye Li; Xing Zou; Ying Zhang; Hepei Li; Mengge Wang; Jin Wu
Journal:  Int J Legal Med       Date:  2017-09-03       Impact factor: 2.686

8.  Genetic polymorphisms and forensic efficiency of 19 X-chromosomal STR loci for Xinjiang Mongolian population.

Authors:  Ling Chen; Yuxin Guo; Cheng Xiao; Weibin Wu; Qiong Lan; Yating Fang; Jiangang Chen; Bofeng Zhu
Journal:  PeerJ       Date:  2018-07-03       Impact factor: 2.984

9.  Identification of Potential Genes for Benign Prostatic Hyperplasia and Prostate Cancer Susceptibility in Four X-chromosome Regions with High Frequency of Microvariant Alleles.

Authors:  Mohammed H Albujja; Safia A Messaudi; Ramachandran Vasudevan; Saleh Al Ghamdi; Pei Pei Chong; Khairul Asri Ghani; Yazan Ranneh; Mohammed Alaidarous; Patimah Ismail
Journal:  Asian Pac J Cancer Prev       Date:  2020-08-01

10.  Haplotype data and forensic evaluation of 23 Y-STR and 12 X-STR loci in eight ethnic groups from Eritrea.

Authors:  Carla Bini; Stefania Sarno; Elisabetta Tangorra; Alessandra Iuvaro; Sara De Fanti; Yohannes Ghebremedhin Tseghereda; Susi Pelotti; Donata Luiselli
Journal:  Int J Legal Med       Date:  2020-10-22       Impact factor: 2.686

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