Literature DB >> 24474659

X-chromosome STR markers data in a Cabo Verde immigrant population of Lisboa.

Heloísa Afonso Costa1, Paulo Morais, Cláudia Vieira da Silva, Sara Matos, Rodolfo Marques Santos, Rosa Espinheira, Jorge Costa Santos, António Amorim.   

Abstract

Population genetic data of 12 X chromosomal short tandem repeats markers (DXS10074, DXS10079, DXS10101, DXS10103, DXS10134, DXS10135, DXS10146, DXS10148, DXS7132, DXS7423, DXS8378 and HPRTB) were analysed in 54 females and 95 males of an immigrant population from Cabo Verde living in Lisboa. The obtained results for forensic statistical parameters such as observed heterozigosity, polymorphism information content, power of discrimination and mean exclusion chance, based on single allele frequencies, reveal that this multiplex system is highly informative and can represent an important tool for genetic identification purposes in the immigrant population of Cabo Verde. Since the studied short tandem repeats genetic markers are distributed on four linkage groups, that can provide independent genotype information, we studied those groups as haploytes. The forensic efficiency parameters for the linked groups were all higher than 0.97, with linkage group I being the most polymorphic and linkage group III the less informative.

Mesh:

Year:  2014        PMID: 24474659     DOI: 10.1007/s11033-014-3114-9

Source DB:  PubMed          Journal:  Mol Biol Rep        ISSN: 0301-4851            Impact factor:   2.316


  31 in total

Review 1.  The X chromosome in population genetics.

Authors:  Stephen F Schaffner
Journal:  Nat Rev Genet       Date:  2004-01       Impact factor: 53.242

2.  Genetic polymorphisms of 12 X-STR for forensic purposes in Shanghai Han population from China.

Authors:  Suhua Zhang; Shumin Zhao; Ruxin Zhu; Chengtao Li
Journal:  Mol Biol Rep       Date:  2011-12-22       Impact factor: 2.316

3.  Population data of 12 X-STR loci in a North of Portugal sample.

Authors:  Laura Cainé; Sérgio Costa; Maria F Pinheiro
Journal:  Int J Legal Med       Date:  2013-01       Impact factor: 2.686

4.  Collaborative genetic mapping of 12 forensic short tandem repeat (STR) loci on the human X chromosome.

Authors:  Michael Nothnagel; Reinhard Szibor; Oliver Vollrath; Christa Augustin; Jeanett Edelmann; Maria Geppert; Cíntia Alves; Leonor Gusmão; Marielle Vennemann; Yiping Hou; Uta-Dorothee Immel; Serena Inturri; Haibo Luo; Sabine Lutz-Bonengel; Carlo Robino; Lutz Roewer; Burkhard Rolf; Juliane Sanft; Kyoung-Jin Shin; Jeong Eun Sim; Peter Wiegand; Christian Winkler; Michael Krawczak; Sandra Hering
Journal:  Forensic Sci Int Genet       Date:  2012-03-27       Impact factor: 4.882

5.  Genetic portrait of a native population of Cabo Verde living in Lisboa.

Authors:  António Amorim; Rodolfo Marques-Santos; Claudia Vieira-Silva; Heloisa Afonso-Costa; Rosa Espinheira; Paulo Ferreira-Gomes; Jorge Costa-Santos
Journal:  Forensic Sci Int Genet       Date:  2012-06-07       Impact factor: 4.882

6.  Sequence variation and allele nomenclature for the X-linked STRs DXS9895, DXS8378, DXS7132, DXS6800, DXS7133, GATA172D05, DXS7423 and DXS8377.

Authors:  Jeanett Edelmann; Danilo Deichsel; Sandra Hering; Ines Plate; Reinhard Szibor
Journal:  Forensic Sci Int       Date:  2002-09-26       Impact factor: 2.395

Review 7.  X-chromosomal markers: past, present and future.

Authors:  Reinhard Szibor
Journal:  Forensic Sci Int Genet       Date:  2007-04-27       Impact factor: 4.882

8.  Refining the genetic portrait of Portuguese Roma through X-chromosomal markers.

Authors:  Vânia Pereira; Leonor Gusmão; Cristina Valente; Rui Pereira; João Carneiro; Iva Gomes; Niels Morling; António Amorim; Maria João Prata
Journal:  Am J Phys Anthropol       Date:  2012-05-11       Impact factor: 2.868

9.  Genetic study of 12 X-STRs in Malay population living in and around Kuala Lumpur using Investigator Argus X-12 kit.

Authors:  Michinaga Samejima; Yasutaka Nakamura; Phrabhakaran Nambiar; Kiyoshi Minaguchi
Journal:  Int J Legal Med       Date:  2012-05-15       Impact factor: 2.686

Review 10.  Construction of a genetic linkage map in man using restriction fragment length polymorphisms.

Authors:  D Botstein; R L White; M Skolnick; R W Davis
Journal:  Am J Hum Genet       Date:  1980-05       Impact factor: 11.025

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  5 in total

1.  Genetic portrait of Lisboa immigrant population from Cabo Verde with mitochondrial DNA analysis.

Authors:  Paulo Morais; António Amorim; Cláudia Vieira da Silva; Teresa Ribeiro; Jorge Costa Santos; Heloísa Afonso Costa
Journal:  J Genet       Date:  2015-09       Impact factor: 1.166

2.  Analysis of 12 X-STR loci in the population of south Croatia.

Authors:  Gordan Mršić; Petar Ozretić; Josip Crnjac; Siniša Merkaš; Ivana Račić; Sara Rožić; Viktorija Sukser; Maja Popović; Marina Korolija
Journal:  Mol Biol Rep       Date:  2017-01-09       Impact factor: 2.316

3.  Study of InDel genetic markers with forensic and ancestry informative interest in PALOP's immigrant populations in Lisboa.

Authors:  Ana Inácio; Heloísa Afonso Costa; Cláudia Vieira da Silva; Teresa Ribeiro; Maria João Porto; Jorge Costa Santos; Gilberto Igrejas; António Amorim
Journal:  Int J Legal Med       Date:  2016-10-29       Impact factor: 2.686

4.  Study of genetic markers of CODIS and ESS systems in a population of individuals from Cabo Verde living in Lisboa.

Authors:  Ana Resende; António Amorim; Cláudia Vieira da Silva; Teresa Ribeiro; Maria João Porto; Jorge Costa Santos; Heloísa Afonso Costa
Journal:  Int J Legal Med       Date:  2016-08-03       Impact factor: 2.686

5.  Haplotype data and forensic evaluation of 23 Y-STR and 12 X-STR loci in eight ethnic groups from Eritrea.

Authors:  Carla Bini; Stefania Sarno; Elisabetta Tangorra; Alessandra Iuvaro; Sara De Fanti; Yohannes Ghebremedhin Tseghereda; Susi Pelotti; Donata Luiselli
Journal:  Int J Legal Med       Date:  2020-10-22       Impact factor: 2.686

  5 in total

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