Literature DB >> 28868577

X-chromosomal STR-based genetic structure of Sichuan Tibetan minority ethnicity group and its relationships to various groups.

Guanglin He1, Ye Li1, Xing Zou2, Ying Zhang3, Hepei Li1, Mengge Wang1, Jin Wu4.   

Abstract

The X-chromosomal short tandem repeats (STRs) with more informative than autosomal STRs in some complicated biological relationships identification due to its specific mode of genetic transmission can be used as a complementary tool in forensic case practices. In this study, we presented the population genetic data of 19 X-STRs, consisting of DXS10174, DXS10075, DXS10079, DXS101, DXS10101, DXS10103, DXS10134, DXS10135, DXS10148, DXS10159, DXS10162, DXS10164, DXS6789, DXS6809, DXS7132, DXS7423, DXS7424, DXS8378, and HPRTB loci, in a sample of 235 individuals of Tibetan nationality from Sichuan province, Southwest China. All 19 X-STR loci were consistent with Hardy-Weinberg equilibrium. The results showed that the combined power of discrimination in females and males are 0.999999999999999999997 and 0.9999999999997, respectively. In addition, the mean paternity exclusion chances based on the formula of MECKrüger, MECKishida, and MECDesmarais as well as MECDesmarais Duo are 0.99999991, 0.9999999999924, 0.9999999999929, and 0.999999985, respectively. In summary, our findings suggested that the AGCU X19 kit can be considered to serve as a high polymorphic information tool for forensic identification and kinship testing in the Sichuan Tibetan population. Furthermore, population genetic structure investigation between Sichuan Tibetan population and other 19 populations using PCA, MDS, and phylogenetic tree illustrated that significant genetic difference was observed between the Sichuan Tibetan and Malay, as well as the Xinjiang Uyghur population.

Entities:  

Keywords:  Forensic genetics; Genetic diversity; Tibetan population; X-STR

Mesh:

Year:  2017        PMID: 28868577     DOI: 10.1007/s00414-017-1672-9

Source DB:  PubMed          Journal:  Int J Legal Med        ISSN: 0937-9827            Impact factor:   2.686


  25 in total

1.  Validation of the STR DXS7424 and the linkage situation on the X-chromosome.

Authors:  Jeanett Edelmann; Sandra Hering; Eberhard Kuhlisch; Reinhard Szibor
Journal:  Forensic Sci Int       Date:  2002-02-18       Impact factor: 2.395

2.  Analyses of genetic structure of Tibeto-Burman populations reveals sex-biased admixture in southern Tibeto-Burmans.

Authors:  Bo Wen; Xuanhua Xie; Song Gao; Hui Li; Hong Shi; Xiufeng Song; Tingzhi Qian; Chunjie Xiao; Jianzhong Jin; Bing Su; Daru Lu; Ranajit Chakraborty; Li Jin
Journal:  Am J Hum Genet       Date:  2004-03-24       Impact factor: 11.025

Review 3.  X-chromosomal markers: past, present and future.

Authors:  Reinhard Szibor
Journal:  Forensic Sci Int Genet       Date:  2007-04-27       Impact factor: 4.882

4.  The STR cluster DXS10148-DXS8378-DXS10135 provides a powerful tool for X-chromosomal haplotyping at Xp22.

Authors:  Tanja Hundertmark; Sandra Hering; Jeanett Edelmann; Christa Augustin; Ines Plate; Reinhard Szibor
Journal:  Int J Legal Med       Date:  2008-08-08       Impact factor: 2.686

5.  Genetic study of 12 X-STRs in Malay population living in and around Kuala Lumpur using Investigator Argus X-12 kit.

Authors:  Michinaga Samejima; Yasutaka Nakamura; Phrabhakaran Nambiar; Kiyoshi Minaguchi
Journal:  Int J Legal Med       Date:  2012-05-15       Impact factor: 2.686

6.  Forensic characteristics and phylogenetic analyses of the Chinese Yi population via 19 X-chromosomal STR loci.

Authors:  GuangLin He; Ye Li; Xing Zou; Ping Li; PengYu Chen; Feng Song; Tianzhen Gao; Miao Liao; Jing Yan; Jin Wu
Journal:  Int J Legal Med       Date:  2017-02-28       Impact factor: 2.686

7.  Genetic polymorphism investigation of the Chinese Yi minority using PowerPlex® Y23 STR amplification system.

Authors:  GuangLin He; PengYu Chen; Xing Zou; Xu Chen; Feng Song; Jing Yan; YiPing Hou
Journal:  Int J Legal Med       Date:  2017-01-16       Impact factor: 2.686

8.  Validation of six closely linked STRs located in the chromosome X centromere region.

Authors:  Jeanett Edelmann; Sandra Hering; Christa Augustin; Stefan Kalis; Reinhard Szibor
Journal:  Int J Legal Med       Date:  2009-02-20       Impact factor: 2.686

9.  Altitude adaptation in Tibetans caused by introgression of Denisovan-like DNA.

Authors:  Emilia Huerta-Sánchez; Xin Jin; Zhuoma Bianba; Benjamin M Peter; Nicolas Vinckenbosch; Yu Liang; Xin Yi; Mingze He; Mehmet Somel; Peixiang Ni; Bo Wang; Xiaohua Ou; Jiangbai Luosang; Zha Xi Ping Cuo; Kui Li; Guoyi Gao; Ye Yin; Wei Wang; Xiuqing Zhang; Xun Xu; Huanming Yang; Yingrui Li; Jian Wang; Jun Wang; Rasmus Nielsen
Journal:  Nature       Date:  2014-07-02       Impact factor: 49.962

10.  Genetic structure of Tibetan populations in Gansu revealed by forensic STR loci.

Authors:  Hong-Bing Yao; Chuan-Chao Wang; Jiang Wang; Xiaolan Tao; Lei Shang; Shao-Qing Wen; Qiajun Du; Qiongying Deng; Bingying Xu; Ying Huang; Hong-Dan Wang; Shujin Li; Liying Ma; Li Jin; Johannes Krause; Hui Li
Journal:  Sci Rep       Date:  2017-01-23       Impact factor: 4.379

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  9 in total

1.  Genetic diversity, structure and forensic characteristics of Hmong-Mien-speaking Miao revealed by autosomal insertion/deletion markers.

Authors:  Han Zhang; Guanglin He; Jianxin Guo; Zheng Ren; Hongling Zhang; Qiyan Wang; Jingyan Ji; Meiqing Yang; Jiang Huang; Chuan-Chao Wang
Journal:  Mol Genet Genomics       Date:  2019-07-16       Impact factor: 3.291

2.  Ancestry informative DIP loci for dissecting genetic structure and ancestry proportions of Qinghai Tibetan and Tibet Tibetan groups.

Authors:  Xiao-Ye Jin; Chun-Mei Shen; Chong Chen; Yu-Xin Guo; Wei Cui; Yi-Jie Wang; Wen-Qing Zhang; Ting-Ting Kong; Bo-Feng Zhu
Journal:  Mol Biol Rep       Date:  2019-12-02       Impact factor: 2.316

3.  Genetic diversity and phylogenetic characteristics of Chinese Tibetan and Yi minority ethnic groups revealed by non-CODIS STR markers.

Authors:  Guanglin He; Zheng Wang; Xing Zou; Xu Chen; Jing Liu; Mengge Wang; Yiping Hou
Journal:  Sci Rep       Date:  2018-04-12       Impact factor: 4.379

4.  Forensic characterization and genetic polymorphisms of 19 X-chromosomal STRs in 1344 Han Chinese individuals and comprehensive population relationship analyses among 20 Chinese groups.

Authors:  Pengyu Chen; Guanglin He; Xing Zou; Mengge Wang; Fuquan Jia; Huiru Bai; Jida Li; Jian Yu; Yanyan Han
Journal:  PLoS One       Date:  2018-09-20       Impact factor: 3.240

5.  Population Genetic Analysis of Modern and Ancient DNA Variations Yields New Insights Into the Formation, Genetic Structure, and Phylogenetic Relationship of Northern Han Chinese.

Authors:  Pengyu Chen; Jian Wu; Li Luo; Hongyan Gao; Mengge Wang; Xing Zou; Yingxiang Li; Gang Chen; Haibo Luo; Limei Yu; Yanyan Han; Fuquan Jia; Guanglin He
Journal:  Front Genet       Date:  2019-10-30       Impact factor: 4.599

6.  Genetic diversity, forensic feature, and phylogenetic analysis of Guizhou Tujia population via 19 X-STRs.

Authors:  Li Luo; Hongyan Gao; Lilan Yao; Fei Long; Hao Zhang; Lushun Zhang; Yong Liu; Jian Yu; Limei Yu; Pengyu Chen
Journal:  Mol Genet Genomic Med       Date:  2020-09-02       Impact factor: 2.183

7.  Genetic polymorphisms of 16 X-STR loci in the Hani population from Southwest China.

Authors:  Linlin Liu; Jinyong Yao; Yangzhi Huang; Lei Gao; Jiameng Dai; Xiaokun Yuan; Xiufeng Zhang; Shengjie Nie; Liping Hu
Journal:  Forensic Sci Res       Date:  2021-06-16

8.  Genetic structure and polymorphisms of Gelao ethnicity residing in southwest china revealed by X-chromosomal genetic markers.

Authors:  Pengyu Chen; Guanglin He; Xing Zou; Mengge Wang; Haibo Luo; Limei Yu; Xijie Hu; Mijia Xia; Hongyan Gao; Jian Yu; Yiping Hou; Yanyan Han
Journal:  Sci Rep       Date:  2018-10-01       Impact factor: 4.379

9.  Genetic diversities and phylogenetic analyses of three Chinese main ethnic groups in southwest China: A Y-Chromosomal STR study.

Authors:  Pengyu Chen; Guanglin He; Xing Zou; Xin Zhang; Jida Li; Zhisong Wang; Hongyan Gao; Li Luo; Zhongqing Zhang; Jian Yu; Yanyan Han
Journal:  Sci Rep       Date:  2018-10-18       Impact factor: 4.379

  9 in total

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