Literature DB >> 22510154

Illuminating the diversity of aromatic polyketide synthases in Aspergillus nidulans.

Manmeet Ahuja1, Yi-Ming Chiang, Shu-Lin Chang, Mike B Praseuth, Ruth Entwistle, James F Sanchez, Hsien-Chun Lo, Hsu-Hua Yeh, Berl R Oakley, Clay C C Wang.   

Abstract

Genome sequencing has revealed that fungi have the ability to synthesize many more natural products (NPs) than are currently known, but methods for obtaining suitable expression of NPs have been inadequate. We have developed a successful strategy that bypasses normal regulatory mechanisms. By efficient gene targeting, we have replaced, en masse, the promoters of nonreducing polyketide synthase (NR-PKS) genes, key genes in NP biosynthetic pathways, and other genes necessary for NR-PKS product formation or release. This has allowed us to determine the products of eight NR-PKSs of Aspergillus nidulans, including seven novel compounds, as well as the NR-PKS genes required for the synthesis of the toxins alternariol (8) and cichorine (19).

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Year:  2012        PMID: 22510154      PMCID: PMC3357392          DOI: 10.1021/ja3016395

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  41 in total

1.  Genomics-driven discovery of PKS-NRPS hybrid metabolites from Aspergillus nidulans.

Authors:  Sebastian Bergmann; Julia Schümann; Kirstin Scherlach; Corinna Lange; Axel A Brakhage; Christian Hertweck
Journal:  Nat Chem Biol       Date:  2007-03-18       Impact factor: 15.040

2.  Characterization of the Aspergillus nidulans monodictyphenone gene cluster.

Authors:  Yi-Ming Chiang; Edyta Szewczyk; Ashley D Davidson; Ruth Entwistle; Nancy P Keller; Clay C C Wang; Berl R Oakley
Journal:  Appl Environ Microbiol       Date:  2010-02-05       Impact factor: 4.792

Review 3.  Unraveling polyketide synthesis in members of the genus Aspergillus.

Authors:  Yi-Ming Chiang; Berl R Oakley; Nancy P Keller; Clay C C Wang
Journal:  Appl Microbiol Biotechnol       Date:  2010-04-02       Impact factor: 4.813

4.  Comparative characterization of fungal anthracenone and naphthacenedione biosynthetic pathways reveals an α-hydroxylation-dependent Claisen-like cyclization catalyzed by a dimanganese thioesterase.

Authors:  Yanran Li; Yit-Heng Chooi; Yuewei Sheng; Joan S Valentine; Yi Tang
Journal:  J Am Chem Soc       Date:  2011-09-14       Impact factor: 15.419

5.  Intimate bacterial-fungal interaction triggers biosynthesis of archetypal polyketides in Aspergillus nidulans.

Authors:  Volker Schroeckh; Kirstin Scherlach; Hans-Wilhelm Nützmann; Ekaterina Shelest; Wolfgang Schmidt-Heck; Julia Schuemann; Karin Martin; Christian Hertweck; Axel A Brakhage
Journal:  Proc Natl Acad Sci U S A       Date:  2009-08-06       Impact factor: 11.205

Review 6.  Recent advances in awakening silent biosynthetic gene clusters and linking orphan clusters to natural products in microorganisms.

Authors:  Yi-Ming Chiang; Shu-Lin Chang; Berl R Oakley; Clay C C Wang
Journal:  Curr Opin Chem Biol       Date:  2010-11-24       Impact factor: 8.822

7.  Two separate gene clusters encode the biosynthetic pathway for the meroterpenoids austinol and dehydroaustinol in Aspergillus nidulans.

Authors:  Hsien-Chun Lo; Ruth Entwistle; Chun-Jun Guo; Manmeet Ahuja; Edyta Szewczyk; Jui-Hsiang Hung; Yi-Ming Chiang; Berl R Oakley; Clay C C Wang
Journal:  J Am Chem Soc       Date:  2012-02-29       Impact factor: 15.419

8.  Twenty-five coregulated transcripts define a sterigmatocystin gene cluster in Aspergillus nidulans.

Authors:  D W Brown; J H Yu; H S Kelkar; M Fernandes; T C Nesbitt; N P Keller; T H Adams; T J Leonard
Journal:  Proc Natl Acad Sci U S A       Date:  1996-02-20       Impact factor: 11.205

9.  Pka, Ras and RGS protein interactions regulate activity of AflR, a Zn(II)2Cys6 transcription factor in Aspergillus nidulans.

Authors:  Kiminori Shimizu; Julie K Hicks; Tzu-Pi Huang; Nancy P Keller
Journal:  Genetics       Date:  2003-11       Impact factor: 4.562

10.  Identification and characterization of the asperthecin gene cluster of Aspergillus nidulans.

Authors:  Edyta Szewczyk; Yi-Ming Chiang; C Elizabeth Oakley; Ashley D Davidson; Clay C C Wang; Berl R Oakley
Journal:  Appl Environ Microbiol       Date:  2008-10-31       Impact factor: 4.792

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  74 in total

Review 1.  Strategies for mining fungal natural products.

Authors:  Philipp Wiemann; Nancy P Keller
Journal:  J Ind Microbiol Biotechnol       Date:  2013-10-22       Impact factor: 3.346

Review 2.  Fungal secondary metabolism: regulation, function and drug discovery.

Authors:  Nancy P Keller
Journal:  Nat Rev Microbiol       Date:  2019-03       Impact factor: 60.633

3.  New multi-marker strains and complementing genes for Aspergillus nidulans molecular biology.

Authors:  James W Dohn; Alexander W Grubbs; C Elizabeth Oakley; Berl R Oakley
Journal:  Fungal Genet Biol       Date:  2018-01-05       Impact factor: 3.495

4.  In trans hydrolysis of carrier protein-bound acyl intermediates by CitA during citrinin biosynthesis.

Authors:  Philip A Storm; Craig A Townsend
Journal:  Chem Commun (Camb)       Date:  2017-12-19       Impact factor: 6.222

Review 5.  Recent advances in natural product discovery.

Authors:  Yunzi Luo; Ryan E Cobb; Huimin Zhao
Journal:  Curr Opin Biotechnol       Date:  2014-09-26       Impact factor: 9.740

6.  Beyond asexual development: modifications in the gene expression profile caused by the absence of the Aspergillus nidulans transcription factor FlbB.

Authors:  Elixabet Oiartzabal-Arano; Aitor Garzia; Ana Gorostidi; Unai Ugalde; Eduardo A Espeso; Oier Etxebeste
Journal:  Genetics       Date:  2015-02-20       Impact factor: 4.562

7.  Comparative genomics reveals high biological diversity and specific adaptations in the industrially and medically important fungal genus Aspergillus.

Authors:  Ronald P de Vries; Robert Riley; Ad Wiebenga; Guillermo Aguilar-Osorio; Sotiris Amillis; Cristiane Akemi Uchima; Gregor Anderluh; Mojtaba Asadollahi; Marion Askin; Kerrie Barry; Evy Battaglia; Özgür Bayram; Tiziano Benocci; Susanna A Braus-Stromeyer; Camila Caldana; David Cánovas; Gustavo C Cerqueira; Fusheng Chen; Wanping Chen; Cindy Choi; Alicia Clum; Renato Augusto Corrêa Dos Santos; André Ricardo de Lima Damásio; George Diallinas; Tamás Emri; Erzsébet Fekete; Michel Flipphi; Susanne Freyberg; Antonia Gallo; Christos Gournas; Rob Habgood; Matthieu Hainaut; María Laura Harispe; Bernard Henrissat; Kristiina S Hildén; Ryan Hope; Abeer Hossain; Eugenia Karabika; Levente Karaffa; Zsolt Karányi; Nada Kraševec; Alan Kuo; Harald Kusch; Kurt LaButti; Ellen L Lagendijk; Alla Lapidus; Anthony Levasseur; Erika Lindquist; Anna Lipzen; Antonio F Logrieco; Andrew MacCabe; Miia R Mäkelä; Iran Malavazi; Petter Melin; Vera Meyer; Natalia Mielnichuk; Márton Miskei; Ákos P Molnár; Giuseppina Mulé; Chew Yee Ngan; Margarita Orejas; Erzsébet Orosz; Jean Paul Ouedraogo; Karin M Overkamp; Hee-Soo Park; Giancarlo Perrone; Francois Piumi; Peter J Punt; Arthur F J Ram; Ana Ramón; Stefan Rauscher; Eric Record; Diego Mauricio Riaño-Pachón; Vincent Robert; Julian Röhrig; Roberto Ruller; Asaf Salamov; Nadhira S Salih; Rob A Samson; Erzsébet Sándor; Manuel Sanguinetti; Tabea Schütze; Kristina Sepčić; Ekaterina Shelest; Gavin Sherlock; Vicky Sophianopoulou; Fabio M Squina; Hui Sun; Antonia Susca; Richard B Todd; Adrian Tsang; Shiela E Unkles; Nathalie van de Wiele; Diana van Rossen-Uffink; Juliana Velasco de Castro Oliveira; Tammi C Vesth; Jaap Visser; Jae-Hyuk Yu; Miaomiao Zhou; Mikael R Andersen; David B Archer; Scott E Baker; Isabelle Benoit; Axel A Brakhage; Gerhard H Braus; Reinhard Fischer; Jens C Frisvad; Gustavo H Goldman; Jos Houbraken; Berl Oakley; István Pócsi; Claudio Scazzocchio; Bernhard Seiboth; Patricia A vanKuyk; Jennifer Wortman; Paul S Dyer; Igor V Grigoriev
Journal:  Genome Biol       Date:  2017-02-14       Impact factor: 13.583

8.  Large-scale metabolomics reveals a complex response of Aspergillus nidulans to epigenetic perturbation.

Authors:  Jessica C Albright; Matthew T Henke; Alexandra A Soukup; Ryan A McClure; Regan J Thomson; Nancy P Keller; Neil L Kelleher
Journal:  ACS Chem Biol       Date:  2015-04-03       Impact factor: 5.100

9.  Exploring Fungal Polyketide C-Methylation through Combinatorial Domain Swaps.

Authors:  Philip A Storm; Paramita Pal; Callie R Huitt-Roehl; Craig A Townsend
Journal:  ACS Chem Biol       Date:  2018-10-30       Impact factor: 5.100

10.  Accurate prediction of secondary metabolite gene clusters in filamentous fungi.

Authors:  Mikael R Andersen; Jakob B Nielsen; Andreas Klitgaard; Lene M Petersen; Mia Zachariasen; Tilde J Hansen; Lene H Blicher; Charlotte H Gotfredsen; Thomas O Larsen; Kristian F Nielsen; Uffe H Mortensen
Journal:  Proc Natl Acad Sci U S A       Date:  2012-12-17       Impact factor: 11.205

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