Literature DB >> 22207035

A further study on chromosome minimization by protoplast fusion in Aspergillus oryzae.

Seiichi Hara1, Feng Jie Jin, Tadashi Takahashi, Yasuji Koyama.   

Abstract

Our goal in this work was to develop a method to minimize the chromosomes of Aspergillus oryzae, to arrive at a deeper understanding of essential gene functions that will help create more efficient industrially useful strains. In a previous study, we successfully constructed a highly reduced chromosome 7 using multiple large-scale chromosomal deletions (Jin et al. in Mol Genet Genomics 283:1-12, 2010). Here, we have created a further reduced chromosome A. oryzae mutant harboring a reduced chromosome 7 and a reduced chromosome 8 both of which contain a large number of non-syntenic blocks. These are the smallest A. oryzae chromosomes that have been reported. Protoplast fusion between the two distinct chromosome-reduced mutants produced a vigorous and stable fusant which was isolated. PCR and flow cytometry confirmed that two kinds of nuclei, derived from the parent strains, existed in this fusant and that the chromosome DNA per nucleus was doubled, suggesting that the fusant was a heterozygous diploid strain. By treating the cell with 1 μg/ml benomyl, cell nuclei haploidization was induced in the stable diploid strain. Array comparative genomic hybridization and pulsed-field gel electrophoresis confirmed that the reduced chromosomes 7 and 8 co-existed in the haploid fusant and that no other chromosomal modifications had occurred. This method provides a useful tool for chromosome engineering in A. oryzae to construct an industry-useful strain.

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Year:  2011        PMID: 22207035     DOI: 10.1007/s00438-011-0669-1

Source DB:  PubMed          Journal:  Mol Genet Genomics        ISSN: 1617-4623            Impact factor:   3.291


  23 in total

1.  A simple method for enrichment of uninucleate conidia of Aspergillus oryzae.

Authors:  Seiichi Hara; Ryohei F Tsuji; Osamu Hatamoto; Tsutomu Masuda
Journal:  Biosci Biotechnol Biochem       Date:  2002-03       Impact factor: 2.043

2.  Chromosomal deletion formation system based on Tn5 double transposition: use for making minimal genomes and essential gene analysis.

Authors:  Igor Y Goryshin; Todd A Naumann; Jennifer Apodaca; William S Reznikoff
Journal:  Genome Res       Date:  2003-03-12       Impact factor: 9.043

3.  Cell size and nucleoid organization of engineered Escherichia coli cells with a reduced genome.

Authors:  Masayuki Hashimoto; Toshiharu Ichimura; Hiroshi Mizoguchi; Kimie Tanaka; Kazuyuki Fujimitsu; Kenji Keyamura; Tomotake Ote; Takehiro Yamakawa; Yukiko Yamazaki; Hideo Mori; Tsutomu Katayama; Jun-ichi Kato
Journal:  Mol Microbiol       Date:  2005-01       Impact factor: 3.501

4.  Conditions for induced fusion of fungal protoplasts in polyethylene glycol solutions.

Authors:  J Anné; J F Peberdy
Journal:  Arch Microbiol       Date:  1975-11-07       Impact factor: 2.552

5.  Induced fusion of fungal protoplasts following treatment with polyethylene glycol.

Authors:  J Anné; J F Peberdy
Journal:  J Gen Microbiol       Date:  1976-02

6.  Engineering a reduced Escherichia coli genome.

Authors:  Vitaliy Kolisnychenko; Guy Plunkett; Christopher D Herring; Tamás Fehér; János Pósfai; Frederick R Blattner; György Pósfai
Journal:  Genome Res       Date:  2002-04       Impact factor: 9.043

7.  Efficient gene disruption in the koji-mold Aspergillus sojae using a novel variation of the positive-negative method.

Authors:  T Takahashi; O Hatamoto; Y Koyama; K Abe
Journal:  Mol Genet Genomics       Date:  2004-09-16       Impact factor: 3.291

8.  A trial of minimization of chromosome 7 in Aspergillus oryzae by multiple chromosomal deletions.

Authors:  Feng Jie Jin; Tadashi Takahashi; Michiyo Utsushikawa; Toshi Furukido; Michiyo Nishida; Masahiro Ogawa; Masahumi Tokuoka; Yasuji Koyama
Journal:  Mol Genet Genomics       Date:  2009-10-24       Impact factor: 3.291

9.  Large scale deletions in the Saccharomyces cerevisiae genome create strains with altered regulation of carbon metabolism.

Authors:  Kiriko Murakami; Eriko Tao; Yuki Ito; Minetaka Sugiyama; Yoshinobu Kaneko; Satoshi Harashima; Takahiro Sumiya; Atsushi Nakamura; Masafumi Nishizawa
Journal:  Appl Microbiol Biotechnol       Date:  2007-03-08       Impact factor: 4.813

10.  Genome sequencing and analysis of Aspergillus oryzae.

Authors:  Masayuki Machida; Kiyoshi Asai; Motoaki Sano; Toshihiro Tanaka; Toshitaka Kumagai; Goro Terai; Ken-Ichi Kusumoto; Toshihide Arima; Osamu Akita; Yutaka Kashiwagi; Keietsu Abe; Katsuya Gomi; Hiroyuki Horiuchi; Katsuhiko Kitamoto; Tetsuo Kobayashi; Michio Takeuchi; David W Denning; James E Galagan; William C Nierman; Jiujiang Yu; David B Archer; Joan W Bennett; Deepak Bhatnagar; Thomas E Cleveland; Natalie D Fedorova; Osamu Gotoh; Hiroshi Horikawa; Akira Hosoyama; Masayuki Ichinomiya; Rie Igarashi; Kazuhiro Iwashita; Praveen Rao Juvvadi; Masashi Kato; Yumiko Kato; Taishin Kin; Akira Kokubun; Hiroshi Maeda; Noriko Maeyama; Jun-ichi Maruyama; Hideki Nagasaki; Tasuku Nakajima; Ken Oda; Kinya Okada; Ian Paulsen; Kazutoshi Sakamoto; Toshihiko Sawano; Mikio Takahashi; Kumiko Takase; Yasunobu Terabayashi; Jennifer R Wortman; Osamu Yamada; Youhei Yamagata; Hideharu Anazawa; Yoji Hata; Yoshinao Koide; Takashi Komori; Yasuji Koyama; Toshitaka Minetoki; Sivasundaram Suharnan; Akimitsu Tanaka; Katsumi Isono; Satoru Kuhara; Naotake Ogasawara; Hisashi Kikuchi
Journal:  Nature       Date:  2005-12-22       Impact factor: 49.962

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  5 in total

1.  Draft genome sequence of Aspergillus oryzae strain 3.042.

Authors:  Guozhong Zhao; Yunping Yao; Wei Qi; Chunling Wang; Lihua Hou; Bin Zeng; Xiaohong Cao
Journal:  Eukaryot Cell       Date:  2012-09

2.  BiFC-based visualisation system reveals cell fusion morphology and heterokaryon incompatibility in the filamentous fungus Aspergillus oryzae.

Authors:  Tomoya Okabe; Takuya Katayama; Taoning Mo; Noriko Mori; Feng Jie Jin; Ikuo Fujii; Kazuhiro Iwashita; Katsuhiko Kitamoto; Jun-Ichi Maruyama
Journal:  Sci Rep       Date:  2018-02-13       Impact factor: 4.379

3.  Efficient genome editing in filamentous fungi via an improved CRISPR-Cas9 ribonucleoprotein method facilitated by chemical reagents.

Authors:  Gen Zou; Meili Xiao; Shunxing Chai; Zhihua Zhu; Ying Wang; Zhihua Zhou
Journal:  Microb Biotechnol       Date:  2020-08-25       Impact factor: 5.813

4.  Investigations on the Fusants From Wide Cross Between White-Rot Fungi and Saccharomyces cerevisiae Reveal Unknown Lignin Degradation Mechanism.

Authors:  Qi Shao; Xin Li; Ying Chen; Zhijun Zhang; Yong Cui; Huan Fan; Dongsheng Wei
Journal:  Front Microbiol       Date:  2022-07-11       Impact factor: 6.064

Review 5.  Recent Molecular Tools for the Genetic Manipulation of Highly Industrially Important Mucoromycota Fungi.

Authors:  Hassan Mohamed; Tahira Naz; Junhuan Yang; Aabid Manzoor Shah; Yusuf Nazir; Yuanda Song
Journal:  J Fungi (Basel)       Date:  2021-12-10
  5 in total

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