| Literature DB >> 22199774 |
Jessy Emmanuel, M Sithambaresan, M R Prathapachandra Kurup.
Abstract
The title compound, C(11)H(9)N(3)O(2), exists in the E conformation with respect to the azomethane C=N bond, and has the keto form. There are two independent mol-ecules in the asymmetric unit and each of these features a slight slanting of the pyridine and furan rings, which form a dihedral angle of 14.96 (10)° in one of the mol-ecules and 5.53 (10)° in the other. The crystal structure is stabilized by N-H⋯O and N-H⋯N hydrogen bonds, weak C-H⋯O and C-H⋯N hydrogen bonds and C-H⋯π inter-actions and π-π inter-actions [shortest centroid-centroid distance = 3.7864 (15) Å].Entities:
Year: 2011 PMID: 22199774 PMCID: PMC3238925 DOI: 10.1107/S1600536811046381
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C11H9N3O2 | |
| Triclinic, | |
| Hall symbol: -P 1 | Mo |
| Cell parameters from 2702 reflections | |
| θ = 3.0–25.0° | |
| µ = 0.10 mm−1 | |
| α = 75.10 (2)° | |
| β = 85.413 (19)° | Block, light-green |
| γ = 84.11 (2)° | 0.26 × 0.21 × 0.18 mm |
| Bruker P4 diffractometer | 3589 independent reflections |
| Radiation source: Enhance (Mo) X-ray Source | 2702 reflections with |
| graphite | |
| Detector resolution: 8.33 pixels mm-1 | θmax = 25.0°, θmin = 3.0° |
| ω scans | |
| Absorption correction: multi-scan ( | |
| 9430 measured reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H atoms treated by a mixture of independent and constrained refinement | |
| (Δ/σ)max < 0.001 | |
| 3589 reflections | Δρmax = 0.22 e Å−3 |
| 298 parameters | Δρmin = −0.29 e Å−3 |
| 2 restraints | Extinction correction: |
| Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.008 (2) |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| O1 | 0.61774 (13) | −0.01358 (13) | 0.71738 (12) | 0.0408 (4) | |
| O2 | 1.11415 (15) | 0.10175 (14) | 0.58530 (13) | 0.0488 (4) | |
| O3 | 0.76963 (14) | 0.26997 (12) | 0.97572 (11) | 0.0373 (3) | |
| O4 | 0.43780 (16) | 0.54591 (14) | 0.67271 (14) | 0.0557 (4) | |
| N1 | 0.32366 (15) | 0.25812 (14) | 0.94601 (14) | 0.0331 (4) | |
| N2 | 0.71582 (15) | 0.15648 (15) | 0.76984 (13) | 0.0293 (4) | |
| N3 | 0.84450 (15) | 0.13134 (15) | 0.70761 (13) | 0.0306 (4) | |
| N4 | 1.00763 (16) | 0.47023 (16) | 1.23845 (14) | 0.0368 (4) | |
| N5 | 0.70930 (14) | 0.49236 (15) | 0.96475 (13) | 0.0268 (3) | |
| N6 | 0.62315 (15) | 0.50278 (15) | 0.86641 (13) | 0.0283 (3) | |
| C1 | 0.2301 (2) | 0.16377 (19) | 0.97664 (17) | 0.0355 (4) | |
| H1 | 0.1473 | 0.1808 | 1.0237 | 0.043* | |
| C2 | 0.24961 (19) | 0.04281 (18) | 0.94233 (17) | 0.0329 (4) | |
| H2 | 0.1806 | −0.0191 | 0.9640 | 0.039* | |
| C3 | 0.37305 (18) | 0.01569 (17) | 0.87553 (16) | 0.0307 (4) | |
| H3 | 0.3890 | −0.0656 | 0.8516 | 0.037* | |
| C4 | 0.47390 (18) | 0.10983 (17) | 0.84378 (15) | 0.0267 (4) | |
| C5 | 0.44343 (18) | 0.23048 (17) | 0.88037 (16) | 0.0300 (4) | |
| H5 | 0.5096 | 0.2951 | 0.8581 | 0.036* | |
| C6 | 0.60870 (18) | 0.07795 (17) | 0.77142 (16) | 0.0288 (4) | |
| C7 | 0.94024 (19) | 0.21070 (18) | 0.71100 (16) | 0.0316 (4) | |
| H7 | 0.9194 | 0.2776 | 0.7546 | 0.038* | |
| C8 | 1.07818 (19) | 0.19826 (19) | 0.64918 (16) | 0.0337 (4) | |
| C9 | 1.18880 (17) | 0.27331 (18) | 0.64346 (15) | 0.0294 (4) | |
| H9 | 1.1906 | 0.3450 | 0.6806 | 0.035* | |
| C10 | 1.3003 (2) | 0.2241 (2) | 0.57180 (17) | 0.0404 (5) | |
| H10 | 1.3897 | 0.2571 | 0.5519 | 0.049* | |
| C11 | 1.2542 (2) | 0.1210 (2) | 0.53733 (18) | 0.0458 (5) | |
| H11 | 1.3072 | 0.0695 | 0.4886 | 0.055* | |
| C12 | 1.0577 (2) | 0.3466 (2) | 1.30061 (17) | 0.0386 (5) | |
| H12 | 1.1209 | 0.3400 | 1.3629 | 0.046* | |
| C13 | 1.0218 (2) | 0.2281 (2) | 1.27846 (18) | 0.0397 (5) | |
| H13 | 1.0602 | 0.1442 | 1.3241 | 0.048* | |
| C14 | 0.92747 (19) | 0.23689 (18) | 1.18683 (16) | 0.0340 (4) | |
| H14 | 0.9003 | 0.1585 | 1.1706 | 0.041* | |
| C15 | 0.87333 (17) | 0.36337 (17) | 1.11913 (15) | 0.0262 (4) | |
| C16 | 0.91764 (18) | 0.47580 (18) | 1.14965 (16) | 0.0318 (4) | |
| H16 | 0.8819 | 0.5611 | 1.1048 | 0.038* | |
| C17 | 0.77872 (18) | 0.37120 (17) | 1.01468 (15) | 0.0267 (4) | |
| C18 | 0.57217 (18) | 0.62304 (18) | 0.81434 (16) | 0.0293 (4) | |
| H18 | 0.5977 | 0.6954 | 0.8421 | 0.035* | |
| C19 | 0.47684 (18) | 0.64921 (18) | 0.71446 (16) | 0.0316 (4) | |
| C20 | 0.41102 (18) | 0.76644 (18) | 0.65139 (15) | 0.0302 (4) | |
| H20 | 0.4195 | 0.8518 | 0.6636 | 0.036* | |
| C21 | 0.32700 (19) | 0.7377 (2) | 0.56365 (17) | 0.0369 (5) | |
| H21 | 0.2697 | 0.7994 | 0.5068 | 0.044* | |
| C22 | 0.3457 (2) | 0.6057 (2) | 0.5781 (2) | 0.0546 (6) | |
| H22 | 0.3028 | 0.5586 | 0.5312 | 0.066* | |
| H2N | 0.7125 (19) | 0.2127 (17) | 0.8202 (16) | 0.035 (5)* | |
| H5N | 0.713 (2) | 0.5638 (17) | 0.9912 (18) | 0.043 (6)* |
| O1 | 0.0418 (8) | 0.0409 (8) | 0.0502 (8) | −0.0061 (6) | 0.0002 (6) | −0.0300 (7) |
| O2 | 0.0606 (9) | 0.0428 (9) | 0.0435 (8) | −0.0036 (7) | −0.0011 (7) | −0.0126 (7) |
| O3 | 0.0526 (8) | 0.0267 (7) | 0.0372 (7) | −0.0020 (6) | −0.0121 (6) | −0.0139 (6) |
| O4 | 0.0671 (10) | 0.0386 (9) | 0.0648 (10) | −0.0073 (7) | −0.0282 (8) | −0.0108 (7) |
| N1 | 0.0369 (9) | 0.0286 (9) | 0.0363 (9) | 0.0003 (7) | −0.0034 (7) | −0.0137 (7) |
| N2 | 0.0332 (8) | 0.0302 (9) | 0.0293 (8) | −0.0044 (7) | −0.0002 (6) | −0.0158 (7) |
| N3 | 0.0342 (8) | 0.0318 (9) | 0.0273 (8) | −0.0021 (7) | −0.0019 (6) | −0.0105 (6) |
| N4 | 0.0373 (9) | 0.0377 (10) | 0.0394 (9) | −0.0021 (7) | −0.0085 (7) | −0.0152 (8) |
| N5 | 0.0296 (8) | 0.0256 (9) | 0.0286 (8) | −0.0016 (6) | −0.0047 (6) | −0.0126 (7) |
| N6 | 0.0290 (8) | 0.0300 (9) | 0.0282 (8) | −0.0037 (6) | −0.0042 (6) | −0.0105 (6) |
| C1 | 0.0370 (10) | 0.0353 (11) | 0.0354 (10) | −0.0026 (9) | 0.0004 (8) | −0.0118 (9) |
| C2 | 0.0356 (10) | 0.0267 (10) | 0.0360 (10) | −0.0059 (8) | −0.0032 (8) | −0.0057 (8) |
| C3 | 0.0394 (10) | 0.0224 (10) | 0.0327 (10) | −0.0017 (8) | −0.0051 (8) | −0.0107 (8) |
| C4 | 0.0340 (10) | 0.0250 (9) | 0.0230 (9) | −0.0010 (7) | −0.0075 (7) | −0.0081 (7) |
| C5 | 0.0325 (10) | 0.0282 (10) | 0.0317 (10) | −0.0041 (8) | −0.0060 (8) | −0.0102 (8) |
| C6 | 0.0351 (10) | 0.0265 (10) | 0.0272 (9) | −0.0011 (8) | −0.0061 (7) | −0.0102 (8) |
| C7 | 0.0375 (10) | 0.0317 (10) | 0.0282 (10) | −0.0046 (8) | −0.0023 (8) | −0.0110 (8) |
| C8 | 0.0403 (11) | 0.0367 (11) | 0.0250 (9) | −0.0016 (8) | −0.0045 (8) | −0.0090 (8) |
| C9 | 0.0281 (9) | 0.0377 (11) | 0.0271 (9) | −0.0072 (8) | −0.0001 (7) | −0.0151 (8) |
| C10 | 0.0329 (10) | 0.0528 (13) | 0.0329 (10) | −0.0011 (9) | −0.0028 (8) | −0.0065 (9) |
| C11 | 0.0503 (13) | 0.0470 (13) | 0.0343 (11) | 0.0125 (10) | 0.0017 (9) | −0.0076 (10) |
| C12 | 0.0370 (11) | 0.0459 (13) | 0.0347 (11) | 0.0010 (9) | −0.0094 (8) | −0.0132 (9) |
| C13 | 0.0501 (12) | 0.0345 (11) | 0.0344 (10) | 0.0041 (9) | −0.0126 (9) | −0.0084 (8) |
| C14 | 0.0433 (11) | 0.0295 (11) | 0.0319 (10) | −0.0020 (8) | −0.0030 (8) | −0.0127 (8) |
| C15 | 0.0268 (9) | 0.0270 (10) | 0.0262 (9) | −0.0006 (7) | 0.0017 (7) | −0.0105 (7) |
| C16 | 0.0348 (10) | 0.0290 (10) | 0.0329 (10) | −0.0011 (8) | −0.0060 (8) | −0.0098 (8) |
| C17 | 0.0309 (9) | 0.0252 (10) | 0.0256 (9) | −0.0040 (7) | 0.0025 (7) | −0.0101 (7) |
| C18 | 0.0313 (9) | 0.0289 (11) | 0.0292 (10) | −0.0036 (8) | 0.0001 (7) | −0.0103 (8) |
| C19 | 0.0312 (10) | 0.0342 (11) | 0.0302 (10) | −0.0073 (8) | 0.0014 (7) | −0.0086 (8) |
| C20 | 0.0329 (10) | 0.0320 (10) | 0.0276 (9) | 0.0022 (8) | −0.0036 (7) | −0.0125 (8) |
| C21 | 0.0351 (11) | 0.0438 (13) | 0.0311 (10) | −0.0036 (9) | −0.0056 (8) | −0.0067 (9) |
| C22 | 0.0612 (15) | 0.0515 (15) | 0.0581 (14) | −0.0118 (11) | −0.0262 (11) | −0.0167 (11) |
| O1—C6 | 1.2258 (19) | C5—H5 | 0.9300 |
| O2—C8 | 1.356 (2) | C7—C8 | 1.430 (2) |
| O2—C11 | 1.398 (2) | C7—H7 | 0.9300 |
| O3—C17 | 1.2325 (19) | C8—C9 | 1.347 (2) |
| O4—C19 | 1.350 (2) | C9—C10 | 1.396 (2) |
| O4—C22 | 1.388 (3) | C9—H9 | 0.9300 |
| N1—C1 | 1.337 (2) | C10—C11 | 1.333 (3) |
| N1—C5 | 1.338 (2) | C10—H10 | 0.9300 |
| N2—C6 | 1.351 (2) | C11—H11 | 0.9300 |
| N2—N3 | 1.381 (2) | C12—C13 | 1.377 (3) |
| N2—H2N | 0.893 (14) | C12—H12 | 0.9300 |
| N3—C7 | 1.285 (2) | C13—C14 | 1.379 (3) |
| N4—C12 | 1.333 (2) | C13—H13 | 0.9300 |
| N4—C16 | 1.333 (2) | C14—C15 | 1.387 (2) |
| N5—C17 | 1.346 (2) | C14—H14 | 0.9300 |
| N5—N6 | 1.383 (2) | C15—C16 | 1.390 (2) |
| N5—H5N | 0.858 (15) | C15—C17 | 1.494 (2) |
| N6—C18 | 1.279 (2) | C16—H16 | 0.9300 |
| C1—C2 | 1.376 (2) | C18—C19 | 1.432 (3) |
| C1—H1 | 0.9300 | C18—H18 | 0.9300 |
| C2—C3 | 1.371 (2) | C19—C20 | 1.340 (2) |
| C2—H2 | 0.9300 | C20—C21 | 1.403 (2) |
| C3—C4 | 1.385 (2) | C20—H20 | 0.9300 |
| C3—H3 | 0.9300 | C21—C22 | 1.314 (3) |
| C4—C5 | 1.391 (2) | C21—H21 | 0.9300 |
| C4—C6 | 1.499 (2) | C22—H22 | 0.9300 |
| C8—O2—C11 | 105.59 (15) | C11—C10—C9 | 106.90 (17) |
| C19—O4—C22 | 105.42 (15) | C11—C10—H10 | 126.6 |
| C1—N1—C5 | 117.26 (15) | C9—C10—H10 | 126.6 |
| C6—N2—N3 | 119.18 (14) | C10—C11—O2 | 109.84 (16) |
| C6—N2—H2N | 121.8 (12) | C10—C11—H11 | 125.1 |
| N3—N2—H2N | 117.9 (12) | O2—C11—H11 | 125.1 |
| C7—N3—N2 | 114.99 (14) | N4—C12—C13 | 124.17 (18) |
| C12—N4—C16 | 116.25 (16) | N4—C12—H12 | 117.9 |
| C17—N5—N6 | 118.33 (14) | C13—C12—H12 | 117.9 |
| C17—N5—H5N | 124.5 (14) | C12—C13—C14 | 118.32 (18) |
| N6—N5—H5N | 117.2 (14) | C12—C13—H13 | 120.8 |
| C18—N6—N5 | 115.34 (14) | C14—C13—H13 | 120.8 |
| N1—C1—C2 | 123.62 (17) | C13—C14—C15 | 119.56 (17) |
| N1—C1—H1 | 118.2 | C13—C14—H14 | 120.2 |
| C2—C1—H1 | 118.2 | C15—C14—H14 | 120.2 |
| C3—C2—C1 | 118.45 (17) | C14—C15—C16 | 116.92 (16) |
| C3—C2—H2 | 120.8 | C14—C15—C17 | 118.80 (15) |
| C1—C2—H2 | 120.8 | C16—C15—C17 | 124.18 (16) |
| C2—C3—C4 | 119.73 (15) | N4—C16—C15 | 124.78 (17) |
| C2—C3—H3 | 120.1 | N4—C16—H16 | 117.6 |
| C4—C3—H3 | 120.1 | C15—C16—H16 | 117.6 |
| C3—C4—C5 | 117.67 (15) | O3—C17—N5 | 122.79 (16) |
| C3—C4—C6 | 118.95 (14) | O3—C17—C15 | 119.94 (15) |
| C5—C4—C6 | 123.37 (15) | N5—C17—C15 | 117.25 (14) |
| N1—C5—C4 | 123.25 (16) | N6—C18—C19 | 121.73 (16) |
| N1—C5—H5 | 118.4 | N6—C18—H18 | 119.1 |
| C4—C5—H5 | 118.4 | C19—C18—H18 | 119.1 |
| O1—C6—N2 | 123.49 (16) | C20—C19—O4 | 109.62 (16) |
| O1—C6—C4 | 120.77 (15) | C20—C19—C18 | 130.05 (17) |
| N2—C6—C4 | 115.74 (14) | O4—C19—C18 | 120.31 (16) |
| N3—C7—C8 | 121.36 (16) | C19—C20—C21 | 107.93 (17) |
| N3—C7—H7 | 119.3 | C19—C20—H20 | 126.0 |
| C8—C7—H7 | 119.3 | C21—C20—H20 | 126.0 |
| C9—C8—O2 | 109.95 (15) | C22—C21—C20 | 106.02 (18) |
| C9—C8—C7 | 128.47 (17) | C22—C21—H21 | 127.0 |
| O2—C8—C7 | 121.59 (16) | C20—C21—H21 | 127.0 |
| C8—C9—C10 | 107.72 (16) | C21—C22—O4 | 111.01 (18) |
| C8—C9—H9 | 126.1 | C21—C22—H22 | 124.5 |
| C10—C9—H9 | 126.1 | O4—C22—H22 | 124.5 |
| C6—N2—N3—C7 | −179.93 (16) | C8—O2—C11—C10 | 0.4 (2) |
| C17—N5—N6—C18 | −172.91 (14) | C16—N4—C12—C13 | −0.2 (3) |
| C5—N1—C1—C2 | −1.3 (3) | N4—C12—C13—C14 | −0.4 (3) |
| N1—C1—C2—C3 | 1.6 (3) | C12—C13—C14—C15 | 0.8 (3) |
| C1—C2—C3—C4 | −0.4 (3) | C13—C14—C15—C16 | −0.7 (2) |
| C2—C3—C4—C5 | −0.9 (2) | C13—C14—C15—C17 | 176.09 (15) |
| C2—C3—C4—C6 | 179.60 (16) | C12—N4—C16—C15 | 0.4 (3) |
| C1—N1—C5—C4 | −0.1 (3) | C14—C15—C16—N4 | 0.1 (3) |
| C3—C4—C5—N1 | 1.2 (3) | C17—C15—C16—N4 | −176.49 (15) |
| C6—C4—C5—N1 | −179.32 (16) | N6—N5—C17—O3 | 0.7 (2) |
| N3—N2—C6—O1 | −2.0 (3) | N6—N5—C17—C15 | 178.83 (13) |
| N3—N2—C6—C4 | 178.51 (14) | C14—C15—C17—O3 | −12.5 (2) |
| C3—C4—C6—O1 | 15.9 (2) | C16—C15—C17—O3 | 163.98 (16) |
| C5—C4—C6—O1 | −163.54 (17) | C14—C15—C17—N5 | 169.29 (15) |
| C3—C4—C6—N2 | −164.56 (15) | C16—C15—C17—N5 | −14.2 (2) |
| C5—C4—C6—N2 | 16.0 (2) | N5—N6—C18—C19 | −177.59 (14) |
| N2—N3—C7—C8 | −179.07 (15) | C22—O4—C19—C20 | 1.1 (2) |
| C11—O2—C8—C9 | −0.6 (2) | C22—O4—C19—C18 | 179.52 (16) |
| C11—O2—C8—C7 | 179.48 (16) | N6—C18—C19—C20 | 178.28 (17) |
| N3—C7—C8—C9 | 179.63 (18) | N6—C18—C19—O4 | 0.2 (2) |
| N3—C7—C8—O2 | −0.5 (3) | O4—C19—C20—C21 | −0.8 (2) |
| O2—C8—C9—C10 | 0.6 (2) | C18—C19—C20—C21 | −179.05 (17) |
| C7—C8—C9—C10 | −179.48 (18) | C19—C20—C21—C22 | 0.2 (2) |
| C8—C9—C10—C11 | −0.4 (2) | C20—C21—C22—O4 | 0.5 (2) |
| C9—C10—C11—O2 | 0.0 (2) | C19—O4—C22—C21 | −1.0 (2) |
| Cg1 and Cg2 are the centroids of the O4/C19–C22 and O2/C8–C11 rings, respectively. |
| H··· | ||||
| N5—H5N···N1i | 0.86 (2) | 2.10 (2) | 2.944 (2) | 169.(2) |
| N2—H2N···O3 | 0.89 (1) | 2.08 (2) | 2.9017 (19) | 154.(2) |
| C21—H21···N3ii | 0.93 | 2.58 | 3.410 (3) | 149. |
| C16—H16···N1i | 0.93 | 2.53 | 3.370 (3) | 150. |
| C11—H11···O1iii | 0.93 | 2.51 | 3.365 (2) | 153. |
| C2—H2···O3iv | 0.93 | 2.49 | 3.116 (2) | 125. |
| C10—H10···Cg1v | 0.93 | 2.78 | 3.594 (2) | 146 |
| C12—H12···Cg2vi | 0.93 | 2.75 | 3.520 (2) | 141 |
Hydrogen-bond geometry (Å, °)
Cg1 and Cg2 are the centroids of the O4/C19–C22 and O2/C8–C11 rings, respectively.
| H⋯ | ||||
|---|---|---|---|---|
| N5—H5 | 0.86 (2) | 2.10 (2) | 2.944 (2) | 169 (2) |
| N2—H2 | 0.89 (1) | 2.08 (2) | 2.9017 (19) | 154 (2) |
| C21—H21⋯N3ii | 0.93 | 2.58 | 3.410 (3) | 149 |
| C16—H16⋯N1i | 0.93 | 2.53 | 3.370 (3) | 150 |
| C11—H11⋯O1iii | 0.93 | 2.51 | 3.365 (2) | 153 |
| C2—H2⋯O3iv | 0.93 | 2.49 | 3.116 (2) | 125 |
| C10—H10⋯ | 0.93 | 2.78 | 3.594 (2) | 146 |
| C12—H12⋯ | 0.93 | 2.75 | 3.520 (2) | 141 |
Symmetry codes: (i) ; (ii) ; (iii) ; (iv) ; (v) ; (vi) .