Literature DB >> 24098233

4-{(E)-[2-(Pyridin-3-ylcarbon-yl)hydrazinyl-idene]meth-yl}phenyl acetate.

Riya Datta1, V Ramya, M Sithambaresan, M R Prathapachandra Kurup.   

Abstract

The title compound, C15H13N3O3, exists in the E conformation with respect to the azo-methane C=N double bond. The pyridyl and phenyl rings form dihedral angles of 35.67 (8) and 36.65 (7)°, respectively with the central C(=O)N2C unit. In the crystal, N-H⋯O and C-H⋯O hydrogen bonds connect the mol-ecules into chains along the b axis. Another C-H⋯O inter-action connects mol-ecules along the c-axis direction, forming layers.

Entities:  

Year:  2013        PMID: 24098233      PMCID: PMC3790414          DOI: 10.1107/S1600536813025075

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For biological applications of benzohydrazones and their derivatives, see: Sreeja et al. (2004 ▶); Rakha et al. (1996 ▶); Takahama (1996 ▶). For the synthesis of related compounds, see: Emmanuel et al. (2011 ▶). For related structures, see: Reshma et al. (2012 ▶).

Experimental

Crystal data

C15H13N3O3 M = 283.28 Monoclinic, a = 16.347 (4) Å b = 5.0859 (10) Å c = 18.408 (5) Å β = 115.311 (9)° V = 1383.6 (6) Å3 Z = 4 Mo Kα radiation μ = 0.10 mm−1 T = 296 K 0.50 × 0.30 × 0.25 mm

Data collection

Bruker Kappa APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2004 ▶) T min = 0.953, T max = 0.976 9585 measured reflections 3325 independent reflections 2288 reflections with I > 2σ(I) R int = 0.023

Refinement

R[F 2 > 2σ(F 2)] = 0.049 wR(F 2) = 0.140 S = 1.04 3325 reflections 195 parameters 1 restraint H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.31 e Å−3 Δρmin = −0.25 e Å−3 Data collection: APEX2 (Bruker, 2004 ▶); cell refinement: APEX2 and SAINT (Bruker, 2004 ▶); data reduction: SAINT and XPREP (Bruker, 2004 ▶); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 (Farrugia, 2012 ▶) and DIAMOND (Brandenburg, 2010 ▶); software used to prepare material for publication: SHELXL97 and publCIF (Westrip, 2010 ▶). Crystal structure: contains datablock(s) Global, I. DOI: 10.1107/S1600536813025075/fj2641sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536813025075/fj2641Isup2.hkl Click here for additional data file. Supplementary material file. DOI: 10.1107/S1600536813025075/fj2641Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C15H13N3O3F(000) = 592
Mr = 283.28Dx = 1.360 Mg m3
Monoclinic, P21/nMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ynCell parameters from 2983 reflections
a = 16.347 (4) Åθ = 2.8–26.9°
b = 5.0859 (10) ŵ = 0.10 mm1
c = 18.408 (5) ÅT = 296 K
β = 115.311 (9)°Block, colorless
V = 1383.6 (6) Å30.50 × 0.30 × 0.25 mm
Z = 4
Bruker Kappa APEXII CCD diffractometer3325 independent reflections
Radiation source: fine-focus sealed tube2288 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.023
Detector resolution: 8.33 pixels mm-1θmax = 28.0°, θmin = 2.2°
ω and φ scanh = −21→19
Absorption correction: multi-scan (SADABS; Bruker, 2004)k = −6→6
Tmin = 0.953, Tmax = 0.976l = −23→24
9585 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.049Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.140H atoms treated by a mixture of independent and constrained refinement
S = 1.04w = 1/[σ2(Fo2) + (0.0632P)2 + 0.3098P] where P = (Fo2 + 2Fc2)/3
3325 reflections(Δ/σ)max < 0.001
195 parametersΔρmax = 0.31 e Å3
1 restraintΔρmin = −0.25 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O10.62319 (9)−0.2235 (2)−0.00860 (7)0.0554 (4)
O20.64307 (10)0.4099 (3)0.44141 (7)0.0639 (4)
N10.72016 (12)0.3431 (3)−0.15907 (10)0.0597 (4)
N20.62677 (10)0.2123 (3)0.01908 (8)0.0427 (3)
N30.62691 (10)0.1739 (3)0.09359 (8)0.0420 (3)
C10.70076 (13)0.2839 (3)−0.09748 (10)0.0477 (4)
H10.72530.3894−0.05190.057*
C20.68290 (15)0.1905 (4)−0.22385 (11)0.0603 (5)
H20.69490.2292−0.26770.072*
C30.62814 (14)−0.0194 (4)−0.22982 (11)0.0596 (5)
H30.6035−0.1191−0.27660.071*
C40.61008 (12)−0.0806 (4)−0.16510 (10)0.0493 (4)
H40.5741−0.2244−0.16710.059*
C50.64659 (11)0.0761 (3)−0.09706 (9)0.0365 (4)
C60.63100 (11)0.0061 (3)−0.02519 (10)0.0380 (4)
C70.60960 (11)0.3795 (3)0.12422 (10)0.0403 (4)
H70.59280.53340.09420.048*
C80.61583 (10)0.3768 (3)0.20592 (9)0.0373 (4)
C90.66527 (12)0.1856 (3)0.26163 (10)0.0457 (4)
H90.69340.05160.24640.055*
C100.67294 (12)0.1932 (4)0.33914 (10)0.0510 (4)
H100.70640.06600.37620.061*
C110.63065 (12)0.3906 (4)0.36095 (10)0.0477 (4)
C120.58098 (13)0.5817 (4)0.30759 (12)0.0537 (5)
H120.55220.71300.32320.064*
C130.57459 (13)0.5752 (3)0.23019 (11)0.0485 (4)
H130.54220.70560.19390.058*
C140.59039 (13)0.2668 (4)0.46456 (11)0.0568 (5)
C150.61036 (14)0.3114 (5)0.55032 (11)0.0647 (6)
H15A0.61150.49680.56050.097*
H15B0.66810.23620.58400.097*
H15C0.56430.22990.56190.097*
H2'0.6234 (12)0.369 (2)−0.0002 (10)0.048 (5)*
O30.53569 (15)0.1229 (5)0.41928 (11)0.1332 (10)
U11U22U33U12U13U23
O10.0910 (10)0.0271 (6)0.0590 (8)−0.0011 (6)0.0423 (7)0.0038 (5)
O20.0756 (9)0.0812 (10)0.0411 (7)−0.0283 (8)0.0308 (7)−0.0160 (7)
N10.0870 (12)0.0523 (9)0.0551 (9)−0.0080 (8)0.0450 (9)0.0004 (8)
N20.0680 (9)0.0283 (7)0.0422 (8)0.0018 (6)0.0335 (7)0.0051 (6)
N30.0589 (9)0.0354 (7)0.0401 (7)−0.0009 (6)0.0292 (6)0.0034 (6)
C10.0674 (11)0.0391 (9)0.0435 (9)−0.0065 (8)0.0304 (9)−0.0046 (7)
C20.0835 (14)0.0644 (12)0.0435 (10)0.0063 (11)0.0373 (10)0.0064 (9)
C30.0724 (13)0.0663 (13)0.0356 (9)0.0018 (10)0.0189 (9)−0.0102 (9)
C40.0540 (10)0.0445 (9)0.0458 (10)−0.0027 (8)0.0180 (8)−0.0067 (8)
C50.0452 (8)0.0296 (7)0.0353 (8)0.0060 (6)0.0178 (7)0.0034 (6)
C60.0484 (9)0.0280 (8)0.0399 (8)0.0014 (6)0.0209 (7)0.0037 (6)
C70.0502 (9)0.0336 (8)0.0426 (9)−0.0010 (7)0.0252 (7)0.0053 (7)
C80.0429 (8)0.0349 (8)0.0403 (8)−0.0055 (6)0.0237 (7)−0.0007 (6)
C90.0494 (9)0.0449 (9)0.0471 (10)0.0039 (7)0.0248 (8)0.0017 (8)
C100.0560 (10)0.0550 (11)0.0404 (9)0.0027 (8)0.0190 (8)0.0061 (8)
C110.0543 (10)0.0549 (11)0.0384 (9)−0.0167 (8)0.0240 (8)−0.0100 (8)
C120.0691 (12)0.0469 (10)0.0570 (11)−0.0012 (9)0.0384 (10)−0.0091 (9)
C130.0602 (11)0.0388 (9)0.0513 (10)0.0034 (8)0.0285 (8)0.0018 (8)
C140.0563 (11)0.0758 (13)0.0406 (9)−0.0116 (10)0.0230 (8)−0.0064 (9)
C150.0679 (13)0.0904 (16)0.0411 (10)−0.0038 (11)0.0282 (9)−0.0026 (10)
O30.1493 (18)0.203 (2)0.0656 (11)−0.1225 (18)0.0636 (12)−0.0513 (13)
O1—C61.2277 (18)C7—C81.463 (2)
O2—C141.329 (2)C7—H70.9300
O2—C111.410 (2)C8—C131.389 (2)
N1—C21.332 (3)C8—C91.394 (2)
N1—C11.336 (2)C9—C101.378 (2)
N2—C61.348 (2)C9—H90.9300
N2—N31.3844 (19)C10—C111.373 (3)
N2—H2'0.866 (9)C10—H100.9300
N3—C71.276 (2)C11—C121.374 (3)
C1—C51.381 (2)C12—C131.384 (3)
C1—H10.9300C12—H120.9300
C2—C31.367 (3)C13—H130.9300
C2—H20.9300C14—O31.180 (2)
C3—C41.380 (3)C14—C151.486 (3)
C3—H30.9300C15—H15A0.9600
C4—C51.386 (2)C15—H15B0.9600
C4—H40.9300C15—H15C0.9600
C5—C61.493 (2)
C14—O2—C11118.47 (14)C13—C8—C9118.60 (16)
C2—N1—C1116.41 (17)C13—C8—C7119.60 (15)
C6—N2—N3120.70 (13)C9—C8—C7121.75 (15)
C6—N2—H2'118.8 (12)C10—C9—C8120.64 (16)
N3—N2—H2'120.5 (12)C10—C9—H9119.7
C7—N3—N2114.55 (13)C8—C9—H9119.7
N1—C1—C5124.26 (16)C11—C10—C9119.27 (17)
N1—C1—H1117.9C11—C10—H10120.4
C5—C1—H1117.9C9—C10—H10120.4
N1—C2—C3124.06 (18)C10—C11—C12121.74 (16)
N1—C2—H2118.0C10—C11—O2119.60 (17)
C3—C2—H2118.0C12—C11—O2118.53 (17)
C2—C3—C4118.76 (17)C11—C12—C13118.72 (17)
C2—C3—H3120.6C11—C12—H12120.6
C4—C3—H3120.6C13—C12—H12120.6
C3—C4—C5118.82 (18)C12—C13—C8121.02 (17)
C3—C4—H4120.6C12—C13—H13119.5
C5—C4—H4120.6C8—C13—H13119.5
C1—C5—C4117.67 (16)O3—C14—O2120.82 (18)
C1—C5—C6122.69 (14)O3—C14—C15126.92 (19)
C4—C5—C6119.53 (15)O2—C14—C15112.26 (17)
O1—C6—N2123.50 (15)C14—C15—H15A109.5
O1—C6—C5121.50 (14)C14—C15—H15B109.5
N2—C6—C5115.00 (13)H15A—C15—H15B109.5
N3—C7—C8121.05 (14)C14—C15—H15C109.5
N3—C7—H7119.5H15A—C15—H15C109.5
C8—C7—H7119.5H15B—C15—H15C109.5
C6—N2—N3—C7−170.37 (15)N3—C7—C8—C13−163.02 (16)
C2—N1—C1—C50.9 (3)N3—C7—C8—C919.6 (2)
C1—N1—C2—C3−0.7 (3)C13—C8—C9—C100.1 (2)
N1—C2—C3—C4−0.4 (3)C7—C8—C9—C10177.51 (15)
C2—C3—C4—C51.3 (3)C8—C9—C10—C110.5 (3)
N1—C1—C5—C40.0 (3)C9—C10—C11—C12−0.2 (3)
N1—C1—C5—C6176.14 (16)C9—C10—C11—O2−175.82 (15)
C3—C4—C5—C1−1.1 (2)C14—O2—C11—C10−85.1 (2)
C3—C4—C5—C6−177.41 (16)C14—O2—C11—C1299.2 (2)
N3—N2—C6—O19.9 (3)C10—C11—C12—C13−0.7 (3)
N3—N2—C6—C5−169.77 (13)O2—C11—C12—C13174.95 (16)
C1—C5—C6—O1−144.25 (18)C11—C12—C13—C81.3 (3)
C4—C5—C6—O131.8 (2)C9—C8—C13—C12−1.0 (3)
C1—C5—C6—N235.5 (2)C7—C8—C13—C12−178.50 (16)
C4—C5—C6—N2−148.44 (16)C11—O2—C14—O31.5 (3)
N2—N3—C7—C8−174.03 (14)C11—O2—C14—C15−179.02 (17)
D—H···AD—HH···AD···AD—H···A
N2—H2′···O1i0.87 (1)2.08 (1)2.9107 (18)162 (2)
C7—H7···O1i0.932.483.251 (2)140
C15—H15C···O3ii0.962.553.469 (4)161
C4—H4···Cg1iii0.933.133.821 (2)133
C13—H13···Cg2iii0.933.283.860 (3)122
C15—H15A···Cg2iv0.963.393.734 (3)104
C15—H15B···Cg2iv0.963.203.734 (3)117
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
N2—H2′⋯O1i 0.87 (1)2.08 (1)2.9107 (18)162 (2)
C7—H7⋯O1i 0.932.483.251 (2)140
C15—H15C⋯O3ii 0.962.553.469 (4)161

Symmetry codes: (i) ; (ii) .

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Authors:  Jessy Emmanuel; M Sithambaresan; M R Prathapachandra Kurup
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3.  N'-[(E)-5-Bromo-2-hy-droxy-3-meth-oxy-benzyl-idene]-4-meth-oxy-benzohydrazide monohydrate.

Authors:  P R Reshma; M Sithambaresan; M R Prathapachandra Kurup
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1.  N'-[(E)-Furan-2-ylmethyl-idene]-4-hydroxy-benzohydrazide.

Authors:  Riya Datta; V Ramya; M Sithambaresan; M R Prathapachandra Kurup
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2014-02-05
  1 in total

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