Literature DB >> 21201695

4-Chloro-N'-[(Z)-4-nitro-benzyl-idene]benzohydrazide monohydrate.

Hoong-Kun Fun, P S Patil, Jyothi N Rao, B Kalluraya, Suchada Chantrapromma.   

Abstract

In the title compound, C(14)H(10)ClN(3)O(3)·H(2)O, the benzohydrazide group is not planar and the mol-ecule exists in a cis configuration with respect to the methyl-idene unit. The dihedral angle between the two substituted benzene rings is 38.7 (3)°. In the crystal structure, mol-ecules are linked by O-H⋯O, O-H⋯N and N-H⋯O hydrogen bonds into a two-dimensional network parallel to the (100) plane. The crystal structure is further stabilized by weak C-H⋯O inter-actions.

Entities:  

Year:  2008        PMID: 21201695      PMCID: PMC2960631          DOI: 10.1107/S160053680802446X

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For bond-length data, see: Allen et al. (1987 ▶). For background to the activities of hydrazones, see, for example: Bedia et al. (2006 ▶); Rollas & Kouçoukgouzel (2007 ▶).

Experimental

Crystal data

C14H10ClN3O3·H2O M = 321.72 Monoclinic, a = 16.3049 (8) Å b = 6.8783 (4) Å c = 12.7209 (7) Å β = 104.122 (4)° V = 1383.53 (13) Å3 Z = 4 Mo Kα radiation μ = 0.30 mm−1 T = 100.0 (1) K 0.38 × 0.21 × 0.10 mm

Data collection

Bruker SMART APEX2 CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2005 ▶) T min = 0.896, T max = 0.971 14031 measured reflections 3172 independent reflections 2558 reflections with I > 2σ(I) R int = 0.044

Refinement

R[F 2 > 2σ(F 2)] = 0.086 wR(F 2) = 0.239 S = 1.13 3172 reflections 199 parameters H-atom parameters constrained Δρmax = 1.40 e Å−3 Δρmin = −0.46 e Å−3 Data collection: APEX2 (Bruker, 2005 ▶); cell refinement: APEX2; data reduction: SAINT (Bruker, 2005 ▶); program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL and PLATON (Spek, 2003 ▶). Crystal structure: contains datablocks global, I. DOI: 10.1107/S160053680802446X/hb2764sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S160053680802446X/hb2764Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C14H10ClN3O3·H2OF000 = 664
Mr = 321.72Dx = 1.545 Mg m3
Monoclinic, P21/cMelting point: 488 K
Hall symbol: -P 2ybcMo Kα radiation λ = 0.71073 Å
a = 16.3049 (8) ÅCell parameters from 3172 reflections
b = 6.8783 (4) Åθ = 1.3–27.5º
c = 12.7209 (7) ŵ = 0.30 mm1
β = 104.122 (4)ºT = 100.0 (1) K
V = 1383.53 (13) Å3Needle, colorless
Z = 40.38 × 0.21 × 0.10 mm
Bruker SMART APEX2 CCD diffractometer3172 independent reflections
Radiation source: fine-focus sealed tube2558 reflections with I > 2σ(I)
Monochromator: graphiteRint = 0.044
Detector resolution: 8.33 pixels mm-1θmax = 27.5º
T = 100.0(1) Kθmin = 1.3º
ω scansh = −21→21
Absorption correction: Multi-scan(SADABS; Bruker, 2005)k = −7→8
Tmin = 0.896, Tmax = 0.971l = −16→16
14031 measured reflections
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.086H-atom parameters constrained
wR(F2) = 0.239  w = 1/[σ2(Fo2) + (0.0417P)2 + 15.1986P] where P = (Fo2 + 2Fc2)/3
S = 1.13(Δ/σ)max < 0.001
3172 reflectionsΔρmax = 1.40 e Å3
199 parametersΔρmin = −0.46 e Å3
Primary atom site location: structure-invariant direct methodsExtinction correction: none
Experimental. The low-temperature data was collected with the Oxford Cyrosystem Cobra low-temperature attachment.
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Cl10.79974 (8)0.8946 (2)0.59885 (10)0.0211 (3)
O1−0.0852 (2)0.7494 (7)−0.1492 (3)0.0312 (10)
O2−0.0194 (2)0.9231 (7)−0.2447 (3)0.0306 (10)
O30.5057 (2)0.8432 (6)0.1303 (3)0.0167 (8)
N10.4189 (2)0.8116 (6)0.2433 (3)0.0146 (8)
H1N10.41110.79460.30650.017*
N20.3494 (3)0.8265 (6)0.1565 (3)0.0154 (9)
N3−0.0222 (3)0.8347 (7)−0.1617 (3)0.0196 (9)
C10.6514 (3)0.8141 (8)0.3030 (4)0.0172 (10)
H1A0.65780.78850.23360.021*
C20.7224 (3)0.8303 (8)0.3878 (4)0.0184 (10)
H2A0.77610.81490.37620.022*
C30.7118 (3)0.8698 (8)0.4901 (4)0.0173 (10)
C40.6319 (3)0.8910 (8)0.5090 (4)0.0173 (10)
H4A0.62590.91730.57850.021*
C50.5614 (3)0.8724 (8)0.4236 (4)0.0153 (10)
H5A0.50770.88470.43590.018*
C60.5702 (3)0.8354 (7)0.3196 (4)0.0143 (10)
C70.4969 (3)0.8287 (7)0.2234 (4)0.0141 (9)
C80.2778 (3)0.7923 (8)0.1770 (4)0.0166 (10)
H8A0.27490.75640.24650.020*
C90.2003 (3)0.8100 (8)0.0902 (4)0.0152 (10)
C100.1241 (3)0.7367 (8)0.1067 (4)0.0181 (11)
H10A0.12300.68410.17370.022*
C110.0507 (3)0.7417 (8)0.0248 (4)0.0193 (11)
H11A0.00050.68900.03460.023*
C120.0543 (3)0.8281 (8)−0.0724 (4)0.0171 (10)
C130.1275 (3)0.9111 (8)−0.0900 (4)0.0165 (10)
H13A0.12720.9735−0.15490.020*
C140.2009 (3)0.8985 (8)−0.0080 (4)0.0168 (10)
H14A0.25100.9496−0.01870.020*
O1W0.3845 (2)0.6173 (6)0.4228 (3)0.0196 (8)
H1W0.41810.52230.41410.029*
H2W0.38620.62560.49310.029*
U11U22U33U12U13U23
Cl10.0164 (6)0.0226 (7)0.0194 (6)−0.0002 (5)−0.0049 (4)−0.0009 (5)
O10.0116 (17)0.049 (3)0.032 (2)−0.0057 (18)0.0034 (15)0.003 (2)
O20.022 (2)0.046 (3)0.0199 (19)−0.0012 (19)−0.0013 (15)0.0072 (19)
O30.0168 (16)0.023 (2)0.0106 (15)−0.0028 (15)0.0035 (12)−0.0020 (14)
N10.0144 (19)0.019 (2)0.0097 (17)−0.0017 (17)0.0010 (14)−0.0001 (17)
N20.0141 (19)0.015 (2)0.0153 (19)−0.0017 (16)−0.0010 (15)−0.0012 (17)
N30.0113 (19)0.027 (3)0.019 (2)0.0000 (18)0.0008 (16)0.0010 (19)
C10.020 (2)0.018 (3)0.015 (2)0.001 (2)0.0050 (18)0.000 (2)
C20.014 (2)0.019 (3)0.022 (2)0.001 (2)0.0038 (19)0.000 (2)
C30.016 (2)0.015 (3)0.017 (2)−0.0024 (19)−0.0034 (18)0.002 (2)
C40.020 (2)0.018 (3)0.013 (2)−0.001 (2)0.0028 (18)−0.001 (2)
C50.016 (2)0.016 (2)0.015 (2)0.0005 (19)0.0049 (17)−0.0023 (19)
C60.015 (2)0.011 (2)0.016 (2)−0.0011 (18)0.0024 (17)−0.0006 (19)
C70.013 (2)0.011 (2)0.018 (2)0.0008 (18)0.0025 (18)−0.0003 (19)
C80.018 (2)0.019 (3)0.012 (2)0.000 (2)0.0015 (18)0.000 (2)
C90.013 (2)0.016 (2)0.015 (2)−0.0001 (19)0.0026 (17)−0.001 (2)
C100.017 (2)0.023 (3)0.015 (2)0.000 (2)0.0055 (18)0.005 (2)
C110.014 (2)0.022 (3)0.022 (2)−0.001 (2)0.0044 (19)0.003 (2)
C120.013 (2)0.022 (3)0.015 (2)0.003 (2)0.0000 (17)0.001 (2)
C130.015 (2)0.019 (3)0.014 (2)−0.001 (2)0.0030 (18)0.000 (2)
C140.013 (2)0.019 (3)0.018 (2)0.0011 (19)0.0031 (18)−0.001 (2)
O1W0.0201 (17)0.028 (2)0.0111 (15)0.0008 (16)0.0047 (13)−0.0007 (15)
Cl1—C31.741 (5)C5—C61.389 (7)
O1—N31.226 (6)C5—H5A0.9300
O2—N31.228 (6)C6—C71.488 (6)
O3—C71.232 (6)C8—C91.466 (6)
N1—C71.361 (6)C8—H8A0.9300
N1—N21.379 (5)C9—C141.391 (7)
N1—H1N10.8525C9—C101.404 (7)
N2—C81.279 (6)C10—C111.383 (7)
N3—C121.469 (6)C10—H10A0.9300
C1—C21.380 (7)C11—C121.387 (7)
C1—C61.399 (7)C11—H11A0.9300
C1—H1A0.9300C12—C131.390 (7)
C2—C31.382 (7)C13—C141.384 (7)
C2—H2A0.9300C13—H13A0.9300
C3—C41.388 (7)C14—H14A0.9300
C4—C51.381 (6)O1W—H1W0.8771
C4—H4A0.9300O1W—H2W0.8898
C7—N1—N2117.9 (4)O3—C7—N1121.2 (4)
C7—N1—H1N1123.2O3—C7—C6122.0 (4)
N2—N1—H1N1118.9N1—C7—C6116.8 (4)
C8—N2—N1115.9 (4)N2—C8—C9119.6 (4)
O1—N3—O2123.8 (4)N2—C8—H8A120.2
O1—N3—C12117.7 (4)C9—C8—H8A120.2
O2—N3—C12118.5 (4)C14—C9—C10119.4 (4)
C2—C1—C6121.2 (5)C14—C9—C8121.3 (4)
C2—C1—H1A119.4C10—C9—C8119.3 (4)
C6—C1—H1A119.4C11—C10—C9120.9 (5)
C1—C2—C3118.6 (5)C11—C10—H10A119.6
C1—C2—H2A120.7C9—C10—H10A119.6
C3—C2—H2A120.7C10—C11—C12117.7 (5)
C2—C3—C4121.4 (4)C10—C11—H11A121.1
C2—C3—Cl1120.0 (4)C12—C11—H11A121.1
C4—C3—Cl1118.6 (4)C11—C12—C13123.0 (4)
C5—C4—C3119.3 (5)C11—C12—N3119.3 (4)
C5—C4—H4A120.3C13—C12—N3117.7 (4)
C3—C4—H4A120.3C14—C13—C12118.1 (5)
C4—C5—C6120.4 (5)C14—C13—H13A120.9
C4—C5—H5A119.8C12—C13—H13A120.9
C6—C5—H5A119.8C13—C14—C9120.6 (5)
C5—C6—C1119.0 (4)C13—C14—H14A119.7
C5—C6—C7122.7 (4)C9—C14—H14A119.7
C1—C6—C7118.2 (4)H1W—O1W—H2W107.9
C7—N1—N2—C8174.0 (5)N1—N2—C8—C9178.3 (4)
C6—C1—C2—C3−0.5 (8)N2—C8—C9—C14−12.5 (8)
C1—C2—C3—C40.8 (8)N2—C8—C9—C10167.7 (5)
C1—C2—C3—Cl1−179.2 (4)C14—C9—C10—C113.6 (8)
C2—C3—C4—C5−0.1 (8)C8—C9—C10—C11−176.7 (5)
Cl1—C3—C4—C5179.8 (4)C9—C10—C11—C12−2.4 (8)
C3—C4—C5—C6−0.8 (8)C10—C11—C12—C13−1.0 (8)
C4—C5—C6—C11.1 (8)C10—C11—C12—N3179.5 (5)
C4—C5—C6—C7−175.3 (5)O1—N3—C12—C11−5.5 (8)
C2—C1—C6—C5−0.4 (8)O2—N3—C12—C11175.2 (5)
C2—C1—C6—C7176.2 (5)O1—N3—C12—C13174.9 (5)
N2—N1—C7—O3−5.1 (7)O2—N3—C12—C13−4.4 (8)
N2—N1—C7—C6173.0 (4)C11—C12—C13—C143.1 (8)
C5—C6—C7—O3162.0 (5)N3—C12—C13—C14−177.3 (5)
C1—C6—C7—O3−14.4 (8)C12—C13—C14—C9−1.9 (8)
C5—C6—C7—N1−16.1 (7)C10—C9—C14—C13−1.3 (8)
C1—C6—C7—N1167.5 (5)C8—C9—C14—C13178.9 (5)
D—H···AD—HH···AD···AD—H···A
O1W—H1W···O3i0.881.932.794 (5)168
O1W—H2W···O3ii0.892.292.898 (5)126
O1W—H2W···N2ii0.892.323.185 (5)163
N1—H1N1···O1W0.852.042.818 (5)151
C2—H2A···O1iii0.932.403.329 (6)176
C14—H14A···O1Wiv0.932.513.322 (6)146
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O1W—H1W⋯O3i0.881.932.794 (5)168
O1W—H2W⋯O3ii0.892.292.898 (5)126
O1W—H2W⋯N2ii0.892.323.185 (5)163
N1—H1N1⋯O1W0.852.042.818 (5)151
C2—H2A⋯O1iii0.932.403.329 (6)176
C14—H14A⋯O1Wiv0.932.513.322 (6)146

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .

  3 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Synthesis and characterization of novel hydrazide-hydrazones and the study of their structure-antituberculosis activity.

Authors:  Koçyiğit-Kaymakçioğlu Bedia; Oruç Elçin; Unsalan Seda; Kandemirli Fatma; Shvets Nathaly; Rollas Sevim; Anatholy Dimoglo
Journal:  Eur J Med Chem       Date:  2006-08-17       Impact factor: 6.514

Review 3.  Biological activities of hydrazone derivatives.

Authors:  Sevim Rollas; S Güniz Küçükgüzel
Journal:  Molecules       Date:  2007-08-17       Impact factor: 4.411

  3 in total
  45 in total

1.  N'-(5-Bromo-2-methoxy-benzyl-idene)-3,4-methyl-enedioxy-benzohydrazide.

Authors:  Ya-Li Sang; Xue-Song Lin
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-06-20

2.  (E)-N'-(3,5-Dibromo-2-hydroxy-benzyl-idene)-2-methoxy-benzohydrazide.

Authors:  Guo-Biao Cao; Xu-Hui Lu
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-06-17

3.  N'-(3,5-Dibromo-2-hydroxy-benzyl-idene)-3,4-methyl-enedioxy-benzohydrazide.

Authors:  Ya-Li Sang; Xue-Song Lin
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-06-20

4.  5-Methyl-N'-(3-nitrobenzylidene)isoxazole-4-carbohydrazide.

Authors:  Yan-Xian Jin
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-12-04

5.  (E)-3-Bromo-N'-(2-chloro-benzyl-idene)benzohydrazide.

Authors:  Lan-Zhu Qu; Guo-Biao Cao
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-06-27

6.  (E)-4-Hydr-oxy-N'-(4-nitro-benzyl-idene)benzohydrazide.

Authors:  Cong-Ming Li; Hong-Yan Ban
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-06-06

7.  (E)-3-Bromo-N'-(2,4-dichloro-benzyl-idene)benzohydrazide.

Authors:  Guo-Biao Cao
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-08-08

8.  (E)-3-Bromo-N'-(4-hydr-oxy-3-nitro-benzyl-idene)benzohydrazide.

Authors:  Guo-Biao Cao; Xiao-Ya Wang
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-07-01

9.  N'-(3-Bromo-5-chloro-2-hydroxy-benzyl-idene)-2-methoxy-benzohydrazide.

Authors:  Jin-Long Hou
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-03-25

10.  (E)-N'-(2-Chloro-benzyl-idene)-2-methoxy-benzohydrazide.

Authors:  Guo-Biao Cao
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-10-03
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