Literature DB >> 22197908

Dynamical diagram and scaling in polymer driven translocation.

T Saito1, T Sakaue.   

Abstract

By analyzing the real space non-equilibrium dynamics of polymers, we elucidate the physics of driven translocation and propose its dynamical scaling scenario analogous to that in the surface growth phenomena. We provide a detailed account of the previously proposed tension-propagation formulation and extend it to cover the broader parameter space relevant to real experiments. In addition to a near-equilibrium regime, we identify three distinct non-equilibrium regimes reflecting the steady-state property of a dragged polymer with finite extensibility. Finite-size effects are also pointed out. These elements are shown to be crucial for the appropriate comparison with experiments and simulations.

Entities:  

Mesh:

Substances:

Year:  2011        PMID: 22197908     DOI: 10.1140/epje/i2011-11135-3

Source DB:  PubMed          Journal:  Eur Phys J E Soft Matter        ISSN: 1292-8941            Impact factor:   1.890


  16 in total

1.  Polymer Translocation through a Pore in a Membrane.

Authors: 
Journal:  Phys Rev Lett       Date:  1996-07-22       Impact factor: 9.161

2.  Driven DNA transport into an asymmetric nanometer-scale pore.

Authors:  S E Henrickson; M Misakian; B Robertson; J J Kasianowicz
Journal:  Phys Rev Lett       Date:  2000-10-02       Impact factor: 9.161

3.  Sucking genes into pores: insight into driven translocation.

Authors:  Takahiro Sakaue
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2010-04-27

4.  Translocation of double-strand DNA through a silicon oxide nanopore.

Authors:  A J Storm; J H Chen; H W Zandbergen; C Dekker
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2005-05-06

5.  Nonequilibrium dynamics of polymer translocation and straightening.

Authors:  Takahiro Sakaue
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2007-08-29

6.  DNA translocation governed by interactions with solid-state nanopores.

Authors:  Meni Wanunu; Jason Sutin; Ben McNally; Andrew Chow; Amit Meller
Journal:  Biophys J       Date:  2008-08-15       Impact factor: 4.033

7.  Dynamical scaling exponents for polymer translocation through a nanopore.

Authors:  Kaifu Luo; Santtu T T Ollila; Ilkka Huopaniemi; Tapio Ala-Nissila; Pawel Pomorski; Mikko Karttunen; See-Chen Ying; Aniket Bhattacharya
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2008-11-03

Review 8.  Single-polymer dynamics under constraints: scaling theory and computer experiment.

Authors:  Andrey Milchev
Journal:  J Phys Condens Matter       Date:  2011-02-18       Impact factor: 2.333

9.  Force-driven polymer translocation through a nanopore: an old problem revisited.

Authors:  Payam Rowghanian; Alexander Y Grosberg
Journal:  J Phys Chem B       Date:  2011-07-22       Impact factor: 2.991

10.  Characterization of individual polynucleotide molecules using a membrane channel.

Authors:  J J Kasianowicz; E Brandin; D Branton; D W Deamer
Journal:  Proc Natl Acad Sci U S A       Date:  1996-11-26       Impact factor: 11.205

View more
  3 in total

1.  Role of non-equilibrium conformations on driven polymer translocation.

Authors:  H H Katkar; M Muthukumar
Journal:  J Chem Phys       Date:  2018-01-14       Impact factor: 3.488

2.  Modulating DNA translocation by a controlled deformation of a PDMS nanochannel device.

Authors:  Paola Fanzio; Chiara Manneschi; Elena Angeli; Valentina Mussi; Giuseppe Firpo; Luca Ceseracciu; Luca Repetto; Ugo Valbusa
Journal:  Sci Rep       Date:  2012-11-09       Impact factor: 4.379

3.  Cellulose nanofibrils manufactured by various methods with application as paper strength additives.

Authors:  Jinsong Zeng; Zhanting Zeng; Zheng Cheng; Yu Wang; Xiaojun Wang; Bin Wang; Wenhua Gao
Journal:  Sci Rep       Date:  2021-06-07       Impact factor: 4.379

  3 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.