Literature DB >> 19113086

Dynamical scaling exponents for polymer translocation through a nanopore.

Kaifu Luo1, Santtu T T Ollila, Ilkka Huopaniemi, Tapio Ala-Nissila, Pawel Pomorski, Mikko Karttunen, See-Chen Ying, Aniket Bhattacharya.   

Abstract

We determine the scaling exponents of polymer translocation (PT) through a nanopore by extensive computer simulations of various microscopic models for chain lengths extending up to N=800 in some cases. We focus on the scaling of the average PT time tau approximately Nalpha and the mean-square change of the PT coordinate, <s2(t)> approximately tbeta. We find alpha=1+2nu and beta=2/alpha for unbiased PT in two dimensions (2D) and three dimensions (3D). The relation alphabeta=2 holds for driven PT in 2D, with a crossover from alpha approximately 2nu for short chains to alpha approximately 1+nu for long chains. This crossover is, however, absent in 3D where alpha=1.42+/-0.01 and alphabeta approximately 2.2 for N approximately 40-800.

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Year:  2008        PMID: 19113086     DOI: 10.1103/PhysRevE.78.050901

Source DB:  PubMed          Journal:  Phys Rev E Stat Nonlin Soft Matter Phys        ISSN: 1539-3755


  7 in total

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3.  Scaling exponents of forced polymer translocation through a nanopore.

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Journal:  Eur Phys J E Soft Matter       Date:  2009-08-08       Impact factor: 1.890

4.  Smooth DNA transport through a narrowed pore geometry.

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Journal:  Biophys J       Date:  2014-11-18       Impact factor: 4.033

5.  Conformation-dependent translocation of a star polymer through a nanochannel.

Authors:  Zhu Liu; Jiannan Liu; Mengying Xiao; Rong Wang; Yeng-Long Chen
Journal:  Biomicrofluidics       Date:  2014-09-10       Impact factor: 2.800

6.  Dynamical diagram and scaling in polymer driven translocation.

Authors:  T Saito; T Sakaue
Journal:  Eur Phys J E Soft Matter       Date:  2011-12-28       Impact factor: 1.890

7.  Driven translocation of a semi-flexible polymer through a nanopore.

Authors:  Jalal Sarabadani; Timo Ikonen; Harri Mökkönen; Tapio Ala-Nissila; Spencer Carson; Meni Wanunu
Journal:  Sci Rep       Date:  2017-08-07       Impact factor: 4.379

  7 in total

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