| Literature DB >> 21799473 |
Yanhong Li1, Hai Yu, Yi Chen, Kam Lau, Li Cai, Hongzhi Cao, Vinod Kumar Tiwari, Jingyao Qu, Vireak Thon, Peng George Wang, Xi Chen.
Abstract
N-Acetylhexosamine 1-kinase (NahK) catalyzes the direct addition of a phosphate from adenosine 5'-triphosphate (ATP) to the anomeric position of N-acetylhexosamine and shows similar activity towards N-acetylglucosamine (GlcNAc) and N-acetylgalactosamine (GalNAc). Herein we report the cloning, characterization, and substrate specificity studies of two NahKs from Bifidobacterium infantis ATCC15697 and Bifidobacterium longum ATCC55813, respectively. A new capillary electrophoresis assay method has been developed for enzyme activity assays. Both enzymes have a good expression level in E. coli (180-185 mg/L culture) and can tolerate diverse modifications at C2 of GlcNAc and GalNAc. Various GlcNAc derivatives with C6, both C2 and C6, as well as both C2 and C3 modifications are tolerable substrates for the newly cloned NahKs. Quite interestingly, despite of their low activities toward glucose and galactose, the activities of both NahKs are much higher for mannose and some of its C2, C4, and C6 derivatives. These NahKs are excellent catalysts for enzymatic and chemoenzymatic synthesis of carbohydrates.Entities:
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Year: 2011 PMID: 21799473 PMCID: PMC6264712 DOI: 10.3390/molecules16086396
Source DB: PubMed Journal: Molecules ISSN: 1420-3049 Impact factor: 4.411
Figure 1Sequence alignment of NahK_JCM1217 (GenBank accession no. BAF73925), NahK_ATCC55813, and NahK_ATCC15697.
Figure 2SDS-PAGE analysis of NahK_ATCC15697 and NahK_ATCC55813. Lanes: BI, whole cell extract before induction; AI, whole cell extract after induction; L, lysate; PP, purified protein; S, Bio-Rad Precision Plus Protein Markers (10–250 kDa).
Figure 3pH profiles of NahK_ATCC15697 (♦, filled diamond) and NahK_ATCC55813 (à, open diamond). Buffers used: MES, pH 6.0; Tris-HCl, pH 7.0–9.0; CAPS, pH 10.0–11.0.
Figure 4The effect of MgCl2 on the activities of NahKs.
Apparent kinetic parameters of NahKs.
| Enzymes | NahK1_ATCC15697 | NahK_ATCC55813 | ||||
|---|---|---|---|---|---|---|
| Substrate | ||||||
| ATP a | 0.10 ± 0.03 | 1.1 ± 0.1 | 11.0 | 0.11 ± 0.03 | 1.3 ± 0.1 | 11.8 |
| GlcNAc | 0.06 ± 0.01 | 0.95 ± 0.01 | 15.8 | 0.06 ± 0.01 | 1.1 ± 0.1 | 18.3 |
| ATP b | 0.08 ± 0.03 | 0.38 ± 0.02 | 4.8 | 0.06 ± 0.02 | 0.48 ± 0.03 | 8.0 |
| GalNAc | 0.09 ± 0.05 | 0.46 ± 0.07 | 5.1 | 0.08 ± 0.03 | 0.57 ± 0.04 | 7.1 |
a The other substrate is GlcNAc; b The other substrate is GalNAc.
Substrate specificity of NahKs using GlcNAc, GalNAc, and their derivatives.
| Substrates | Percentage Conversion (%) | Substrates | Percentage Conversion (%) | |||||||
|---|---|---|---|---|---|---|---|---|---|---|
| NahK_ATCC15697 | NahK_ATCC55813 | NahK_ATCC15697 | NahK_ATCC55813 | |||||||
| a 0.75 μM | b 15 μM | a 0.75 μM | b 15 μM | a 0.75 μM | b 15 μM | a 0.75 μM | b 15 μM | |||
| 35.4 ± 0.1 | NA | 42.3 ± 0.2 | NA | 12.5 ± 0.1 | NA | 19.9 ± 0.1 | NA | |||
| 10.7 ± 0.9 | NA | 16.2 ± 0.9 | NA | 11.2 ± 1.6 | NA | 21.8 ± 0.2 | NA | |||
| 11.5 ± 1.0 | NA | 22.8 ± 0.4 | NA | 9.9 ± 0.6 | NA | 21.0 ± 1.2 | NA | |||
| 20.9 ± 0.6 | NA | 35.0 ± 2.0 | NA | 12.1 ± 0.3 | NA | 24.0 ± 0.1 | NA | |||
| 10.3 ± 0.4 | NA | 5.2 ± 0.2 | NA | 0 | 62.2 ± 1.0 | 0 | 51.9 ± 0.5 | |||
| 0 | 14.5 ± 0.1 | 0 | 7.0 ± 0.1 | 0 | 7.6 ± 0.1 | 0 | 4.3 ± 0.1 | |||
| 0 | 15.0 ± 0.1 | 0 | 8.4 ± 0.1 | 0 | 11.7 ± 0.2 | 0 | 6.6 ± 0.1 | |||
| 0 | 6.4 ± 0.2 | 0 | 4.0 ± 0.1 | 0 | 7.2 ± 0.1 | 0 | 3.3 ± 0.2 | |||
| 4.4 ± 1.2 | 41.8 ± 0.3 | 2.1 ± 0.2 | 36.3 ± 0.3 | 0 | 6.9 ± 0.1 | 0 | 4.4 ± 0.1 | |||
| 0 | 37.2 ± 0.5 | 0 | 23.4 ± 0.1 | 0 | 4.9 ± 0.1 | 0 | 3.9 ± 0.1 | |||
NA: not assayed; a Reactions were allowed to proceed for 10 min at 37 °C; b Reactions were allowed to proceed for 30 min at 37 °C.
Substrate specificity of NahKs using Glc, Gal, Man, ManNAc, and their derivatives.
| Substrates | Percentage Conversion (%) | Substrates | Percentage Conversion (%) | ||
|---|---|---|---|---|---|
| NahK_ATCC15697 | NahK_ATCC55813 | NahK_ATCC15697 | NahK_ATCC55813 | ||
| 9.1 ± 0.1 | 4.7 ± 0.1 | 7.3 ± 0.2 | 4.4 ± 0.1 | ||
| 44.8 ± 0.2 | 28.4 ± 0.1 | 8.9 ± 0.1 | 5.5 ± 0.1 | ||
| 68.0 ± 1.7 | 37.1 ± 0.4 | 7.6 ± 0.1 | 5.4 ± 0.2 | ||
| 44.4 ± 0.2 | 47.0 ± 0.1 | 12.0 ± 0.1 | 9.1 ± 0.2 | ||
| 9.4 ± 0.5 | 0 | 12.0 ± 0.4 | 7.4 ± 0.3 | ||
| 53.3 ± 0.1 | 40.2 ± 0.2 | 20.3 ± 0.3 | 18.6 ± 0.4 | ||
| 37.1 ± 0.2 | 23.9 ± 0.1 | 32.6 ± 0.1 | 28.9 ± 0.1 | ||
The concentration of the enzyme used was 15 μM. Reactions were allowed to proceed for 30 min at 37 °C.