Literature DB >> 21609840

Differential effects of thiopeptide and orthosomycin antibiotics on translational GTPases.

Aleksandra Mikolajka1, Hanqing Liu, Yuanwei Chen, Agata L Starosta, Viter Márquez, Marina Ivanova, Barry S Cooperman, Daniel N Wilson.   

Abstract

The ribosome is a major target in the bacterial cell for antibiotics. Here, we dissect the effects that the thiopeptide antibiotics thiostrepton (ThS) and micrococcin (MiC) as well as the orthosomycin antibiotic evernimicin (Evn) have on translational GTPases. We demonstrate that, like ThS, MiC is a translocation inhibitor, and that the activation by MiC of the ribosome-dependent GTPase activity of EF-G is dependent on the presence of the ribosomal proteins L7/L12 as well as the G' subdomain of EF-G. In contrast, Evn does not inhibit translocation but is a potent inhibitor of back-translocation as well as IF2-dependent 70S-initiation complex formation. Collectively, these results shed insight not only into fundamental aspects of translation but also into the unappreciated specificities of these classes of translational inhibitors.
Copyright © 2011 Elsevier Ltd. All rights reserved.

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Year:  2011        PMID: 21609840      PMCID: PMC3102230          DOI: 10.1016/j.chembiol.2011.03.010

Source DB:  PubMed          Journal:  Chem Biol        ISSN: 1074-5521


  80 in total

1.  Stimulation of the GTPase activity of translation elongation factor G by ribosomal protein L7/12.

Authors:  A Savelsbergh; D Mohr; B Wilden; W Wintermeyer; M V Rodnina
Journal:  J Biol Chem       Date:  2000-01-14       Impact factor: 5.157

2.  Inhibition by thiostrepton of the formation of a ribosome-bound guanine nucleotide complex.

Authors:  B Weisblum; V Demohn
Journal:  FEBS Lett       Date:  1970-12       Impact factor: 4.124

3.  How initiation factors tune the rate of initiation of protein synthesis in bacteria.

Authors:  Ayman Antoun; Michael Y Pavlov; Martin Lovmar; Måns Ehrenberg
Journal:  EMBO J       Date:  2006-05-25       Impact factor: 11.598

4.  Thiostrepton inhibition of tRNA delivery to the ribosome.

Authors:  Ruben L Gonzalez; Steven Chu; Joseph D Puglisi
Journal:  RNA       Date:  2007-10-19       Impact factor: 4.942

5.  EF-G-dependent GTPase on the ribosome. conformational change and fusidic acid inhibition.

Authors:  Hyuk-Soo Seo; Sameem Abedin; Detlev Kamp; Daniel N Wilson; Knud H Nierhaus; Barry S Cooperman
Journal:  Biochemistry       Date:  2006-02-28       Impact factor: 3.162

Review 6.  From amino acids to heteroaromatics--thiopeptide antibiotics, nature's heterocyclic peptides.

Authors:  Rachael A Hughes; Christopher J Moody
Journal:  Angew Chem Int Ed Engl       Date:  2007       Impact factor: 15.336

7.  A novel domain in translational GTPase BipA mediates interaction with the 70S ribosome and influences GTP hydrolysis.

Authors:  Megan A deLivron; Heeren S Makanji; Maura C Lane; Victoria L Robinson
Journal:  Biochemistry       Date:  2009-11-10       Impact factor: 3.162

8.  Effects of mutations in ribosomal protein L16 on susceptibility and accumulation of evernimicin.

Authors:  P M McNicholas; P A Mann; D J Najarian; L Miesel; R S Hare; T A Black
Journal:  Antimicrob Agents Chemother       Date:  2001-01       Impact factor: 5.191

9.  Evernimicin (SCH27899) inhibits a novel ribosome target site: analysis of 23S ribosomal DNA mutants.

Authors:  P V Adrian; C Mendrick; D Loebenberg; P McNicholas; K J Shaw; K P Klugman; R S Hare; T A Black
Journal:  Antimicrob Agents Chemother       Date:  2000-11       Impact factor: 5.191

10.  Mechanism of Tet(O)-mediated tetracycline resistance.

Authors:  Sean R Connell; Catharine A Trieber; George P Dinos; Edda Einfeldt; Diane E Taylor; Knud H Nierhaus
Journal:  EMBO J       Date:  2003-02-17       Impact factor: 11.598

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  22 in total

Review 1.  Ribosome-targeting antibiotics and mechanisms of bacterial resistance.

Authors:  Daniel N Wilson
Journal:  Nat Rev Microbiol       Date:  2014-01       Impact factor: 60.633

2.  The posttranslational modification cascade to the thiopeptide berninamycin generates linear forms and altered macrocyclic scaffolds.

Authors:  Steven J Malcolmson; Travis S Young; J Graham Ruby; Peter Skewes-Cox; Christopher T Walsh
Journal:  Proc Natl Acad Sci U S A       Date:  2013-05-06       Impact factor: 11.205

3.  Cryo-EM structure of the tetracycline resistance protein TetM in complex with a translating ribosome at 3.9-Å resolution.

Authors:  Stefan Arenz; Fabian Nguyen; Roland Beckmann; Daniel N Wilson
Journal:  Proc Natl Acad Sci U S A       Date:  2015-04-13       Impact factor: 11.205

4.  Structural basis for TetM-mediated tetracycline resistance.

Authors:  Alexandra Dönhöfer; Sibylle Franckenberg; Stephan Wickles; Otto Berninghausen; Roland Beckmann; Daniel N Wilson
Journal:  Proc Natl Acad Sci U S A       Date:  2012-10-01       Impact factor: 11.205

5.  Structural basis for potent inhibitory activity of the antibiotic tigecycline during protein synthesis.

Authors:  Lasse Jenner; Agata L Starosta; Daniel S Terry; Aleksandra Mikolajka; Liudmila Filonava; Marat Yusupov; Scott C Blanchard; Daniel N Wilson; Gulnara Yusupova
Journal:  Proc Natl Acad Sci U S A       Date:  2013-02-19       Impact factor: 11.205

6.  Ribosomal protein L7/L12 is required for GTPase translation factors EF-G, RF3, and IF2 to bind in their GTP state to 70S ribosomes.

Authors:  Markus A Carlson; Bassam G Haddad; Amanda J Weis; Colby S Blackwood; Catherine D Shelton; Michelle E Wuerth; Justin D Walter; Paul Clint Spiegel
Journal:  FEBS J       Date:  2017-04-10       Impact factor: 5.542

7.  Avilamycin and evernimicin induce structural changes in rProteins uL16 and CTC that enhance the inhibition of A-site tRNA binding.

Authors:  Miri Krupkin; Itai Wekselman; Donna Matzov; Zohar Eyal; Yael Diskin Posner; Haim Rozenberg; Ella Zimmerman; Anat Bashan; Ada Yonath
Journal:  Proc Natl Acad Sci U S A       Date:  2016-10-19       Impact factor: 11.205

Review 8.  The bacterial translation stress response.

Authors:  Agata L Starosta; Jürgen Lassak; Kirsten Jung; Daniel N Wilson
Journal:  FEMS Microbiol Rev       Date:  2014-09-26       Impact factor: 16.408

9.  Structures of the orthosomycin antibiotics avilamycin and evernimicin in complex with the bacterial 70S ribosome.

Authors:  Stefan Arenz; Manuel F Juette; Michael Graf; Fabian Nguyen; Paul Huter; Yury S Polikanov; Scott C Blanchard; Daniel N Wilson
Journal:  Proc Natl Acad Sci U S A       Date:  2016-06-21       Impact factor: 11.205

Review 10.  Bioactive oligosaccharide natural products.

Authors:  Emilianne K McCranie; Brian O Bachmann
Journal:  Nat Prod Rep       Date:  2014-08       Impact factor: 13.423

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