Literature DB >> 23027944

Structural basis for TetM-mediated tetracycline resistance.

Alexandra Dönhöfer1, Sibylle Franckenberg, Stephan Wickles, Otto Berninghausen, Roland Beckmann, Daniel N Wilson.   

Abstract

Ribosome protection proteins (RPPs) confer tetracycline resistance by binding to the ribosome and chasing the drug from its binding site. The current model for the mechanism of action of RPPs proposes that drug release is indirect and achieved via conformational changes within the drug-binding site induced upon binding of the RPP to the ribosome. Here we report a cryo-EM structure of the RPP TetM in complex with the 70S ribosome at 7.2-Å resolution. The structure reveals the contacts of TetM with the ribosome, including interaction between the conserved and functionally critical C-terminal extension of TetM and the decoding center of the small subunit. Moreover, we observe direct interaction between domain IV of TetM and the tetracycline binding site and identify residues critical for conferring tetracycline resistance. A model is presented whereby TetM directly dislodges tetracycline to confer resistance.

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Year:  2012        PMID: 23027944      PMCID: PMC3479509          DOI: 10.1073/pnas.1208037109

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  38 in total

1.  Crystal structures of complexes of the small ribosomal subunit with tetracycline, edeine and IF3.

Authors:  M Pioletti; F Schlünzen; J Harms; R Zarivach; M Glühmann; H Avila; A Bashan; H Bartels; T Auerbach; C Jacobi; T Hartsch; A Yonath; F Franceschi
Journal:  EMBO J       Date:  2001-04-17       Impact factor: 11.598

2.  Classification and evolution of P-loop GTPases and related ATPases.

Authors:  Detlef D Leipe; Yuri I Wolf; Eugene V Koonin; L Aravind
Journal:  J Mol Biol       Date:  2002-03-15       Impact factor: 5.469

3.  Localization of the ribosomal protection protein Tet(O) on the ribosome and the mechanism of tetracycline resistance.

Authors:  C M Spahn; G Blaha; R K Agrawal; P Penczek; R A Grassucci; C A Trieber; S R Connell; D E Taylor; K H Nierhaus; J Frank
Journal:  Mol Cell       Date:  2001-05       Impact factor: 17.970

Review 4.  Insights into the decoding mechanism from recent ribosome structures.

Authors:  James M Ogle; Andrew P Carter; V Ramakrishnan
Journal:  Trends Biochem Sci       Date:  2003-05       Impact factor: 13.807

5.  A new tRNA intermediate revealed on the ribosome during EF4-mediated back-translocation.

Authors:  Sean R Connell; Maya Topf; Yan Qin; Daniel N Wilson; Thorsten Mielke; Paola Fucini; Knud H Nierhaus; Christian M T Spahn
Journal:  Nat Struct Mol Biol       Date:  2008-09       Impact factor: 15.369

6.  Role of domains 4 and 5 in elongation factor G functions on the ribosome.

Authors:  A Savelsbergh; N B Matassova; M V Rodnina; W Wintermeyer
Journal:  J Mol Biol       Date:  2000-07-21       Impact factor: 5.469

7.  Tetracycline antibiotics: mode of action, applications, molecular biology, and epidemiology of bacterial resistance.

Authors:  I Chopra; M Roberts
Journal:  Microbiol Mol Biol Rev       Date:  2001-06       Impact factor: 11.056

Review 8.  New developments in tetracycline antibiotics: glycylcyclines and tetracycline efflux pump inhibitors.

Authors:  Ian Chopra
Journal:  Drug Resist Updat       Date:  2002 Jul-Aug       Impact factor: 18.500

9.  Mechanism of Tet(O)-mediated tetracycline resistance.

Authors:  Sean R Connell; Catharine A Trieber; George P Dinos; Edda Einfeldt; Diane E Taylor; Knud H Nierhaus
Journal:  EMBO J       Date:  2003-02-17       Impact factor: 11.598

10.  The tetracycline resistance protein Tet(o) perturbs the conformation of the ribosomal decoding centre.

Authors:  Sean R Connell; Catharine A Trieber; Ulrich Stelzl; Edda Einfeldt; Diane E Taylor; Knud H Nierhaus
Journal:  Mol Microbiol       Date:  2002-09       Impact factor: 3.501

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  59 in total

1.  Negamycin induces translational stalling and miscoding by binding to the small subunit head domain of the Escherichia coli ribosome.

Authors:  Nelson B Olivier; Roger B Altman; Jonas Noeske; Gregory S Basarab; Erin Code; Andrew D Ferguson; Ning Gao; Jian Huang; Manuel F Juette; Stephania Livchak; Matthew D Miller; D Bryan Prince; Jamie H D Cate; Ed T Buurman; Scott C Blanchard
Journal:  Proc Natl Acad Sci U S A       Date:  2014-11-03       Impact factor: 11.205

2.  Structural characterization of an alternative mode of tigecycline binding to the bacterial ribosome.

Authors:  Andreas Schedlbauer; Tatsuya Kaminishi; Borja Ochoa-Lizarralde; Neha Dhimole; Shu Zhou; Jorge P López-Alonso; Sean R Connell; Paola Fucini
Journal:  Antimicrob Agents Chemother       Date:  2015-03-09       Impact factor: 5.191

Review 3.  Ribosome-targeting antibiotics and mechanisms of bacterial resistance.

Authors:  Daniel N Wilson
Journal:  Nat Rev Microbiol       Date:  2014-01       Impact factor: 60.633

4.  Cryo-EM structure of the tetracycline resistance protein TetM in complex with a translating ribosome at 3.9-Å resolution.

Authors:  Stefan Arenz; Fabian Nguyen; Roland Beckmann; Daniel N Wilson
Journal:  Proc Natl Acad Sci U S A       Date:  2015-04-13       Impact factor: 11.205

Review 5.  Target protection as a key antibiotic resistance mechanism.

Authors:  Daniel N Wilson; Vasili Hauryliuk; Gemma C Atkinson; Alex J O'Neill
Journal:  Nat Rev Microbiol       Date:  2020-06-25       Impact factor: 60.633

6.  Structural basis for potent inhibitory activity of the antibiotic tigecycline during protein synthesis.

Authors:  Lasse Jenner; Agata L Starosta; Daniel S Terry; Aleksandra Mikolajka; Liudmila Filonava; Marat Yusupov; Scott C Blanchard; Daniel N Wilson; Gulnara Yusupova
Journal:  Proc Natl Acad Sci U S A       Date:  2013-02-19       Impact factor: 11.205

7.  EF-G catalyzes tRNA translocation by disrupting interactions between decoding center and codon-anticodon duplex.

Authors:  Guangqiao Liu; Guangtao Song; Danyang Zhang; Dejiu Zhang; Zhikai Li; Zhixin Lyu; Jianshu Dong; John Achenbach; Weimin Gong; Xin Sheng Zhao; Knud H Nierhaus; Yan Qin
Journal:  Nat Struct Mol Biol       Date:  2014-08-10       Impact factor: 15.369

8.  Occurrence and distribution of antibiotic resistance genes in water supply reservoirs in Jingjinji area, China.

Authors:  Kai Zhang; Zhi-Guang Niu; Zhiwei Lv; Ying Zhang
Journal:  Ecotoxicology       Date:  2017-09-12       Impact factor: 2.823

Review 9.  Natural Products as Platforms To Overcome Antibiotic Resistance.

Authors:  Sean E Rossiter; Madison H Fletcher; William M Wuest
Journal:  Chem Rev       Date:  2017-09-27       Impact factor: 60.622

10.  High-Level Antibiotic Tolerance of a Clinically Isolated Enterococcus faecalis Strain.

Authors:  Huan Gu; Sweta Roy; Xiaohui Zheng; Tian Gao; Huilin Ma; Zafer Soultan; Christopher Fortner; Shikha Nangia; Dacheng Ren
Journal:  Appl Environ Microbiol       Date:  2020-12-17       Impact factor: 4.792

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