| Literature DB >> 21588407 |
Hadi D Arman, Trupta Kaulgud, Edward R T Tiekink.
Abstract
The constituents of the title 1:1 co-crystal, C(7)H(6)O(2)·C(14)H(12)N(2), are connected into dimeric aggregates by a bifurcated O-H⋯N hydrogen bond; the hydroxyl-H atom is hydrogen bonded to the two N atoms of the 2,9-dimethyl-phenanthroline. The hydrogen-bonded residues are almost orthogonal to each other [dihedral angle = 78.56 (7) °]. In the crystal packing, the aggregates are assembled into layers in the bc plane by π⋯π inter-actions [ring centroid⋯ring centroid distance = 3.5577 (16) Å] involving the pyridyl rings, and C-H⋯π contacts involving the phenanthroline-H atom and the phenyl ring of the acid.Entities:
Year: 2010 PMID: 21588407 PMCID: PMC3007214 DOI: 10.1107/S1600536810029065
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C7H6O2·C14H12N2 | |
| Monoclinic, | Mo |
| Hall symbol: -P 2ybc | Cell parameters from 6463 reflections |
| θ = 2.1–40.6° | |
| µ = 0.08 mm−1 | |
| β = 104.832 (6)° | Block, colourless |
| 0.46 × 0.31 × 0.20 mm | |
| Rigaku AFC12K/SATURN724 diffractometer | 3907 independent reflections |
| Radiation source: fine-focus sealed tube | 3589 reflections with |
| graphite | |
| ω scans | θmax = 27.5°, θmin = 2.3° |
| Absorption correction: multi-scan ( | |
| 13167 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 3907 reflections | (Δ/σ)max = 0.001 |
| 231 parameters | Δρmax = 0.38 e Å−3 |
| 1 restraint | Δρmin = −0.55 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| O1 | 0.25983 (16) | 0.62242 (12) | 0.73806 (12) | 0.0586 (5) | |
| H1O | 0.276 (2) | 0.5534 (8) | 0.733 (2) | 0.088* | |
| O2 | 0.22317 (11) | 0.60724 (11) | 0.53150 (11) | 0.0383 (3) | |
| N1 | 0.20135 (10) | 0.37901 (11) | 0.76126 (12) | 0.0224 (3) | |
| N2 | 0.39950 (10) | 0.44243 (10) | 0.79467 (11) | 0.0203 (3) | |
| C1 | 0.22858 (14) | 0.66340 (14) | 0.62456 (15) | 0.0290 (4) | |
| C2 | 0.20107 (11) | 0.78707 (13) | 0.62330 (14) | 0.0223 (3) | |
| C3 | 0.22051 (12) | 0.85085 (14) | 0.73285 (15) | 0.0252 (3) | |
| H3 | 0.2497 | 0.8147 | 0.8102 | 0.030* | |
| C4 | 0.19729 (14) | 0.96692 (15) | 0.72878 (18) | 0.0335 (4) | |
| H4 | 0.2113 | 1.0104 | 0.8033 | 0.040* | |
| C5 | 0.15377 (16) | 1.01962 (16) | 0.6164 (2) | 0.0409 (5) | |
| H5 | 0.1376 | 1.0991 | 0.6138 | 0.049* | |
| C6 | 0.13392 (15) | 0.95635 (17) | 0.50764 (19) | 0.0388 (4) | |
| H6 | 0.1037 | 0.9926 | 0.4307 | 0.047* | |
| C7 | 0.15784 (12) | 0.84071 (15) | 0.51025 (16) | 0.0290 (4) | |
| H7 | 0.1448 | 0.7980 | 0.4352 | 0.035* | |
| C8 | 0.02727 (13) | 0.41778 (19) | 0.65105 (17) | 0.0383 (4) | |
| H8A | 0.0627 | 0.4698 | 0.6070 | 0.058* | |
| H8B | −0.0154 | 0.4626 | 0.6926 | 0.058* | |
| H8C | −0.0156 | 0.3648 | 0.5916 | 0.058* | |
| C9 | 0.10420 (12) | 0.35052 (15) | 0.74590 (15) | 0.0270 (3) | |
| C10 | 0.07329 (13) | 0.26372 (16) | 0.81689 (16) | 0.0320 (4) | |
| H10 | 0.0032 | 0.2450 | 0.8033 | 0.038* | |
| C11 | 0.14511 (14) | 0.20691 (15) | 0.90530 (16) | 0.0307 (4) | |
| H11 | 0.1252 | 0.1483 | 0.9535 | 0.037* | |
| C12 | 0.24909 (12) | 0.23568 (13) | 0.92478 (14) | 0.0241 (3) | |
| C13 | 0.27308 (11) | 0.32317 (12) | 0.84953 (13) | 0.0202 (3) | |
| C14 | 0.32829 (14) | 0.18039 (14) | 1.01699 (14) | 0.0280 (4) | |
| H14 | 0.3116 | 0.1210 | 1.0668 | 0.034* | |
| C15 | 0.42676 (13) | 0.21252 (14) | 1.03328 (14) | 0.0278 (4) | |
| H15 | 0.4784 | 0.1751 | 1.0945 | 0.033* | |
| C16 | 0.45439 (12) | 0.30185 (13) | 0.95988 (14) | 0.0225 (3) | |
| C17 | 0.37851 (11) | 0.35697 (12) | 0.86771 (13) | 0.0192 (3) | |
| C18 | 0.55556 (12) | 0.33981 (14) | 0.97563 (14) | 0.0260 (3) | |
| H18 | 0.6092 | 0.3058 | 1.0372 | 0.031* | |
| C19 | 0.57615 (12) | 0.42575 (14) | 0.90205 (15) | 0.0261 (3) | |
| H19 | 0.6441 | 0.4520 | 0.9123 | 0.031* | |
| C20 | 0.49563 (12) | 0.47512 (13) | 0.81070 (14) | 0.0225 (3) | |
| C21 | 0.51601 (14) | 0.56796 (15) | 0.72651 (16) | 0.0315 (4) | |
| H21A | 0.4683 | 0.5603 | 0.6445 | 0.047* | |
| H21B | 0.5860 | 0.5609 | 0.7186 | 0.047* | |
| H21C | 0.5071 | 0.6433 | 0.7615 | 0.047* |
| O1 | 0.1251 (15) | 0.0251 (7) | 0.0210 (6) | 0.0281 (8) | 0.0100 (8) | 0.0043 (5) |
| O2 | 0.0607 (9) | 0.0301 (7) | 0.0209 (6) | 0.0070 (6) | 0.0049 (6) | −0.0025 (5) |
| N1 | 0.0235 (6) | 0.0242 (6) | 0.0198 (6) | 0.0004 (5) | 0.0060 (5) | −0.0013 (5) |
| N2 | 0.0254 (6) | 0.0179 (6) | 0.0175 (6) | −0.0008 (5) | 0.0054 (5) | −0.0013 (4) |
| C1 | 0.0404 (9) | 0.0242 (8) | 0.0206 (7) | 0.0036 (7) | 0.0046 (7) | 0.0022 (6) |
| C2 | 0.0206 (7) | 0.0234 (7) | 0.0234 (7) | 0.0014 (5) | 0.0065 (6) | 0.0042 (6) |
| C3 | 0.0262 (7) | 0.0261 (8) | 0.0251 (8) | 0.0012 (6) | 0.0096 (6) | 0.0023 (6) |
| C4 | 0.0398 (9) | 0.0256 (8) | 0.0416 (10) | 0.0008 (7) | 0.0221 (8) | −0.0022 (7) |
| C5 | 0.0503 (11) | 0.0248 (8) | 0.0562 (12) | 0.0117 (8) | 0.0293 (10) | 0.0124 (8) |
| C6 | 0.0396 (10) | 0.0386 (10) | 0.0408 (10) | 0.0120 (8) | 0.0150 (8) | 0.0197 (8) |
| C7 | 0.0262 (8) | 0.0337 (9) | 0.0268 (8) | 0.0031 (6) | 0.0063 (6) | 0.0078 (6) |
| C8 | 0.0252 (8) | 0.0568 (12) | 0.0318 (9) | 0.0056 (8) | 0.0050 (7) | 0.0026 (8) |
| C9 | 0.0248 (8) | 0.0330 (8) | 0.0235 (8) | 0.0002 (6) | 0.0067 (6) | −0.0058 (6) |
| C10 | 0.0292 (8) | 0.0389 (10) | 0.0305 (9) | −0.0096 (7) | 0.0124 (7) | −0.0077 (7) |
| C11 | 0.0391 (9) | 0.0296 (8) | 0.0273 (8) | −0.0099 (7) | 0.0155 (7) | −0.0029 (6) |
| C12 | 0.0341 (8) | 0.0205 (7) | 0.0193 (7) | −0.0034 (6) | 0.0098 (6) | −0.0022 (6) |
| C13 | 0.0264 (7) | 0.0184 (7) | 0.0164 (6) | −0.0008 (5) | 0.0066 (6) | −0.0032 (5) |
| C14 | 0.0424 (9) | 0.0213 (7) | 0.0209 (7) | −0.0022 (6) | 0.0089 (7) | 0.0029 (6) |
| C15 | 0.0382 (9) | 0.0234 (8) | 0.0199 (7) | 0.0055 (6) | 0.0039 (7) | 0.0036 (6) |
| C16 | 0.0285 (8) | 0.0210 (7) | 0.0173 (7) | 0.0039 (6) | 0.0046 (6) | −0.0019 (5) |
| C17 | 0.0254 (7) | 0.0172 (6) | 0.0152 (6) | 0.0009 (5) | 0.0055 (6) | −0.0026 (5) |
| C18 | 0.0252 (7) | 0.0285 (8) | 0.0220 (7) | 0.0064 (6) | 0.0016 (6) | −0.0020 (6) |
| C19 | 0.0221 (7) | 0.0302 (8) | 0.0267 (8) | 0.0004 (6) | 0.0073 (6) | −0.0054 (6) |
| C20 | 0.0274 (7) | 0.0213 (7) | 0.0201 (7) | −0.0012 (6) | 0.0086 (6) | −0.0048 (5) |
| C21 | 0.0354 (9) | 0.0294 (9) | 0.0315 (9) | −0.0072 (7) | 0.0121 (7) | 0.0008 (7) |
| O1—C1 | 1.317 (2) | C9—C10 | 1.412 (2) |
| O1—H1O | 0.839 (12) | C10—C11 | 1.367 (3) |
| O2—C1 | 1.213 (2) | C10—H10 | 0.9500 |
| N1—C9 | 1.328 (2) | C11—C12 | 1.412 (2) |
| N1—C13 | 1.3597 (19) | C11—H11 | 0.9500 |
| N2—C20 | 1.327 (2) | C12—C13 | 1.410 (2) |
| N2—C17 | 1.3614 (19) | C12—C14 | 1.436 (2) |
| C1—C2 | 1.487 (2) | C13—C17 | 1.448 (2) |
| C2—C7 | 1.394 (2) | C14—C15 | 1.355 (2) |
| C2—C3 | 1.396 (2) | C14—H14 | 0.9500 |
| C3—C4 | 1.386 (2) | C15—C16 | 1.432 (2) |
| C3—H3 | 0.9500 | C15—H15 | 0.9500 |
| C4—C5 | 1.385 (3) | C16—C17 | 1.410 (2) |
| C4—H4 | 0.9500 | C16—C18 | 1.410 (2) |
| C5—C6 | 1.385 (3) | C18—C19 | 1.367 (2) |
| C5—H5 | 0.9500 | C18—H18 | 0.9500 |
| C6—C7 | 1.384 (3) | C19—C20 | 1.411 (2) |
| C6—H6 | 0.9500 | C19—H19 | 0.9500 |
| C7—H7 | 0.9500 | C20—C21 | 1.503 (2) |
| C8—C9 | 1.502 (2) | C21—H21A | 0.9800 |
| C8—H8A | 0.9800 | C21—H21B | 0.9800 |
| C8—H8B | 0.9800 | C21—H21C | 0.9800 |
| C8—H8C | 0.9800 | ||
| C1—O1—H1O | 108 (2) | C10—C11—C12 | 119.76 (15) |
| C9—N1—C13 | 118.52 (14) | C10—C11—H11 | 120.1 |
| C20—N2—C17 | 118.58 (13) | C12—C11—H11 | 120.1 |
| O2—C1—O1 | 124.10 (16) | C13—C12—C11 | 117.00 (15) |
| O2—C1—C2 | 123.66 (15) | C13—C12—C14 | 120.36 (15) |
| O1—C1—C2 | 112.24 (14) | C11—C12—C14 | 122.64 (15) |
| C7—C2—C3 | 119.61 (15) | N1—C13—C12 | 122.99 (14) |
| C7—C2—C1 | 119.28 (15) | N1—C13—C17 | 118.06 (13) |
| C3—C2—C1 | 121.09 (14) | C12—C13—C17 | 118.94 (14) |
| C4—C3—C2 | 120.00 (15) | C15—C14—C12 | 120.29 (15) |
| C4—C3—H3 | 120.0 | C15—C14—H14 | 119.9 |
| C2—C3—H3 | 120.0 | C12—C14—H14 | 119.9 |
| C5—C4—C3 | 120.17 (17) | C14—C15—C16 | 121.19 (15) |
| C5—C4—H4 | 119.9 | C14—C15—H15 | 119.4 |
| C3—C4—H4 | 119.9 | C16—C15—H15 | 119.4 |
| C4—C5—C6 | 119.92 (17) | C17—C16—C18 | 117.04 (14) |
| C4—C5—H5 | 120.0 | C17—C16—C15 | 119.87 (15) |
| C6—C5—H5 | 120.0 | C18—C16—C15 | 123.08 (14) |
| C7—C6—C5 | 120.49 (17) | N2—C17—C16 | 122.89 (14) |
| C7—C6—H6 | 119.8 | N2—C17—C13 | 117.76 (13) |
| C5—C6—H6 | 119.8 | C16—C17—C13 | 119.34 (13) |
| C6—C7—C2 | 119.82 (17) | C19—C18—C16 | 119.79 (14) |
| C6—C7—H7 | 120.1 | C19—C18—H18 | 120.1 |
| C2—C7—H7 | 120.1 | C16—C18—H18 | 120.1 |
| C9—C8—H8A | 109.5 | C18—C19—C20 | 119.44 (15) |
| C9—C8—H8B | 109.5 | C18—C19—H19 | 120.3 |
| H8A—C8—H8B | 109.5 | C20—C19—H19 | 120.3 |
| C9—C8—H8C | 109.5 | N2—C20—C19 | 122.25 (14) |
| H8A—C8—H8C | 109.5 | N2—C20—C21 | 117.01 (14) |
| H8B—C8—H8C | 109.5 | C19—C20—C21 | 120.74 (14) |
| N1—C9—C10 | 122.31 (16) | C20—C21—H21A | 109.5 |
| N1—C9—C8 | 116.68 (15) | C20—C21—H21B | 109.5 |
| C10—C9—C8 | 120.99 (15) | H21A—C21—H21B | 109.5 |
| C11—C10—C9 | 119.42 (15) | C20—C21—H21C | 109.5 |
| C11—C10—H10 | 120.3 | H21A—C21—H21C | 109.5 |
| C9—C10—H10 | 120.3 | H21B—C21—H21C | 109.5 |
| O2—C1—C2—C7 | 6.1 (3) | C14—C12—C13—C17 | −0.6 (2) |
| O1—C1—C2—C7 | −174.24 (17) | C13—C12—C14—C15 | 0.6 (2) |
| O2—C1—C2—C3 | −172.06 (17) | C11—C12—C14—C15 | −178.93 (15) |
| O1—C1—C2—C3 | 7.6 (2) | C12—C14—C15—C16 | 0.1 (2) |
| C7—C2—C3—C4 | −0.3 (2) | C14—C15—C16—C17 | −0.8 (2) |
| C1—C2—C3—C4 | 177.84 (15) | C14—C15—C16—C18 | 178.49 (15) |
| C2—C3—C4—C5 | 0.7 (3) | C20—N2—C17—C16 | 0.2 (2) |
| C3—C4—C5—C6 | −0.4 (3) | C20—N2—C17—C13 | 179.49 (12) |
| C4—C5—C6—C7 | −0.4 (3) | C18—C16—C17—N2 | 0.7 (2) |
| C5—C6—C7—C2 | 0.8 (3) | C15—C16—C17—N2 | −179.97 (13) |
| C3—C2—C7—C6 | −0.5 (2) | C18—C16—C17—C13 | −178.60 (13) |
| C1—C2—C7—C6 | −178.63 (16) | C15—C16—C17—C13 | 0.7 (2) |
| C13—N1—C9—C10 | −0.7 (2) | N1—C13—C17—N2 | −0.3 (2) |
| C13—N1—C9—C8 | 177.54 (14) | C12—C13—C17—N2 | −179.36 (13) |
| N1—C9—C10—C11 | 0.4 (3) | N1—C13—C17—C16 | 179.01 (13) |
| C8—C9—C10—C11 | −177.79 (16) | C12—C13—C17—C16 | 0.0 (2) |
| C9—C10—C11—C12 | 0.1 (2) | C17—C16—C18—C19 | −0.6 (2) |
| C10—C11—C12—C13 | −0.3 (2) | C15—C16—C18—C19 | −179.93 (15) |
| C10—C11—C12—C14 | 179.27 (15) | C16—C18—C19—C20 | −0.3 (2) |
| C9—N1—C13—C12 | 0.6 (2) | C17—N2—C20—C19 | −1.1 (2) |
| C9—N1—C13—C17 | −178.42 (13) | C17—N2—C20—C21 | 178.74 (13) |
| C11—C12—C13—N1 | −0.1 (2) | C18—C19—C20—N2 | 1.2 (2) |
| C14—C12—C13—N1 | −179.61 (14) | C18—C19—C20—C21 | −178.67 (14) |
| C11—C12—C13—C17 | 178.91 (13) |
| Cg is the centroid of the C2–C7 ring. |
| H··· | ||||
| O1—H1o···N1 | 0.839 (12) | 2.327 (16) | 2.973 (2) | 134 (2) |
| O1—H1o···N2 | 0.839 (12) | 2.09 (2) | 2.788 (2) | 141 (2) |
| C19—H19···Cgi | 0.95 | 2.60 | 3.426 (2) | 145 |
Hydrogen-bond geometry (Å, °)
Cg is the centroid of the C2–C7 ring.
| H⋯ | ||||
|---|---|---|---|---|
| O1—H1o⋯N1 | 0.84 (1) | 2.33 (2) | 2.973 (2) | 134 (2) |
| O1—H1o⋯N2 | 0.84 (1) | 2.09 (2) | 2.788 (2) | 141 (2) |
| C19—H19⋯ | 0.95 | 2.60 | 3.426 (2) | 145 |
Symmetry code: (i) .