Literature DB >> 21587571

2,2'-(Disulfanedi-yl)dibenzoic acid-N,N'-bis-(4-pyridyl-meth-yl)ethane-dithio-amide (1/1).

Hadi D Arman, Tyler Miller, Pavel Poplaukhin, Edward R T Tiekink.   

Abstract

The asymmetric unit of the title co-crystal, C(14)H(14)N(4)S(2)·C(14)H(10)O(4)S(2), comprises a twisted 2,2'-(disulfanedi-yl)dibenzoic acid mol-ecule [dihedral angle between the benzene rings = 83.53 (14)°] and a U-shaped mol-ecule of N,N'-bis-(4-pyridyl-meth-yl)ethane-dithio-amide in which intra-molecular N-H⋯S hydrogen bonds are observed. Two mol-ecules of each form a centrosymmetric ring, with an extended chair conformation, mediated by carbox-yl-pyridine O-H⋯N hydrogen bonds between the carboxylic acid groups of two 2,2'-(disulfanediyl)dibenzoic acid molecules and pyridine-N atoms of two N,N'-bis(4-pyridylmethyl)ethanedithioamide molecules. The tetra-meric aggregates are linked into a supra-molecular chain along the b axis via amide-carbonyl N-H⋯O hydrogen bonds.

Entities:  

Year:  2010        PMID: 21587571      PMCID: PMC2983272          DOI: 10.1107/S1600536810036755

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related studies on co-crystal formation involving 2-[(2-carb­oxy­phen­yl)disulfan­yl]benzoic acid, see: Broker & Tiekink (2007 ▶, 2010 ▶); Broker et al. (2008 ▶); Arman et al. (2010 ▶).

Experimental

Crystal data

C14H14N4S2·C14H10O4S2 M = 608.75 Monoclinic, a = 18.502 (5) Å b = 10.624 (3) Å c = 15.026 (4) Å β = 110.235 (5)° V = 2771.3 (13) Å3 Z = 4 Mo Kα radiation μ = 0.39 mm−1 T = 98 K 0.38 × 0.26 × 0.10 mm

Data collection

Rigaku AFC12/SATURN724 diffractometer 16758 measured reflections 6348 independent reflections 5349 reflections with I > 2σ(I) R int = 0.050

Refinement

R[F 2 > 2σ(F 2)] = 0.063 wR(F 2) = 0.156 S = 1.13 6348 reflections 373 parameters 4 restraints H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.40 e Å−3 Δρmin = −0.30 e Å−3 Data collection: CrystalClear (Molecular Structure Corporation & Rigaku, 2005 ▶); cell refinement: CrystalClear; data reduction: CrystalClear; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEPII (Johnson, 1976 ▶) and DIAMOND (Brandenburg, 2006 ▶); software used to prepare material for publication: publCIF (Westrip, 2010 ▶). Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536810036755/hg2714sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810036755/hg2714Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C14H14N4S2·C14H10O4S2F(000) = 1264
Mr = 608.75Dx = 1.459 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71069 Å
Hall symbol: -P 2ybcCell parameters from 11634 reflections
a = 18.502 (5) Åθ = 2.2–40.8°
b = 10.624 (3) ŵ = 0.39 mm1
c = 15.026 (4) ÅT = 98 K
β = 110.235 (5)°Block, red
V = 2771.3 (13) Å30.38 × 0.26 × 0.10 mm
Z = 4
Rigaku AFC12K/SATURN724 diffractometer5349 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tubeRint = 0.050
graphiteθmax = 27.5°, θmin = 2.3°
ω scansh = −22→24
16758 measured reflectionsk = −13→12
6348 independent reflectionsl = −19→12
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.063Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.156H atoms treated by a mixture of independent and constrained refinement
S = 1.13w = 1/[σ2(Fo2) + (0.0595P)2 + 1.5417P] where P = (Fo2 + 2Fc2)/3
6348 reflections(Δ/σ)max = 0.001
373 parametersΔρmax = 0.40 e Å3
4 restraintsΔρmin = −0.30 e Å3
Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
S10.14789 (4)1.09050 (7)0.26162 (6)0.0419 (2)
S20.38384 (5)1.05034 (10)0.43964 (7)0.0577 (3)
S30.28281 (4)0.41538 (6)0.47637 (5)0.03595 (18)
S40.23818 (4)0.28425 (6)0.54351 (5)0.03659 (18)
O10.36687 (12)0.57687 (19)0.40613 (16)0.0439 (5)
O20.45371 (13)0.7063 (3)0.50168 (18)0.0542 (6)
H1o0.469 (2)0.707 (4)0.455 (2)0.081*
O30.18572 (13)0.1116 (2)0.63693 (18)0.0487 (5)
O40.06256 (14)0.06603 (19)0.61426 (18)0.0482 (6)
H2o0.0915 (19)0.016 (3)0.655 (2)0.072*
N10.10469 (15)0.6043 (2)0.23918 (19)0.0389 (6)
N20.22644 (15)0.9846 (3)0.42551 (19)0.0445 (6)
H1n0.2727 (10)0.978 (3)0.4689 (19)0.053*
N30.30049 (14)1.2123 (2)0.3103 (2)0.0401 (6)
H2n0.2547 (10)1.233 (3)0.271 (2)0.048*
N40.48896 (14)1.2348 (3)0.12994 (19)0.0439 (6)
C10.13990 (17)0.8058 (3)0.3642 (2)0.0363 (6)
C20.19777 (17)0.7309 (3)0.3524 (2)0.0389 (6)
H20.25040.74830.38720.047*
C30.17793 (17)0.6311 (3)0.2896 (2)0.0376 (6)
H30.21760.58010.28200.045*
C40.04915 (17)0.6752 (3)0.2516 (2)0.0389 (6)
H4−0.00300.65540.21630.047*
C50.06427 (16)0.7753 (3)0.3131 (2)0.0367 (6)
H50.02330.82300.32050.044*
C60.16015 (19)0.9164 (3)0.4317 (2)0.0465 (7)
H6A0.11550.97400.41640.056*
H6B0.17170.88580.49740.056*
C70.22516 (16)1.0588 (3)0.3541 (2)0.0365 (6)
C80.30383 (17)1.1141 (3)0.3643 (2)0.0395 (7)
C90.36528 (19)1.2963 (3)0.3191 (3)0.0514 (9)
H9A0.40251.29030.38470.062*
H9B0.34591.38390.30930.062*
C100.40742 (17)1.2706 (3)0.2513 (2)0.0414 (7)
C110.43798 (18)1.3709 (3)0.2185 (3)0.0476 (7)
H110.43061.45430.23650.057*
C120.47942 (19)1.3496 (3)0.1591 (3)0.0509 (8)
H120.50181.41920.13850.061*
C130.45899 (17)1.1392 (3)0.1596 (2)0.0447 (7)
H130.46571.05720.13840.054*
C140.41768 (18)1.1519 (3)0.2208 (3)0.0470 (7)
H140.39691.08020.24110.056*
C150.35166 (15)0.6427 (2)0.5491 (2)0.0336 (6)
C160.29850 (16)0.5498 (2)0.5523 (2)0.0337 (6)
C170.25988 (17)0.5629 (3)0.6169 (2)0.0384 (6)
H170.22350.50110.61930.046*
C180.27440 (19)0.6650 (3)0.6771 (2)0.0460 (7)
H180.24730.67280.72030.055*
C190.32744 (19)0.7565 (3)0.6763 (3)0.0482 (8)
H190.33730.82590.71870.058*
C200.36576 (17)0.7446 (3)0.6123 (2)0.0407 (7)
H200.40240.80670.61120.049*
C210.39214 (16)0.6382 (3)0.4790 (2)0.0352 (6)
C220.13608 (16)0.3115 (3)0.4988 (2)0.0346 (6)
C230.08651 (17)0.2328 (2)0.5271 (2)0.0351 (6)
C240.00720 (18)0.2556 (3)0.4900 (2)0.0418 (7)
H24−0.02660.20190.50780.050*
C25−0.02326 (18)0.3530 (3)0.4287 (2)0.0450 (7)
H25−0.07730.36690.40470.054*
C260.02518 (19)0.4301 (3)0.4026 (2)0.0466 (7)
H260.00460.49870.36100.056*
C270.10406 (17)0.4090 (3)0.4363 (2)0.0415 (7)
H270.13670.46220.41610.050*
C280.11699 (17)0.1310 (3)0.5979 (2)0.0369 (6)
U11U22U33U12U13U23
S10.0356 (4)0.0497 (4)0.0434 (5)−0.0029 (3)0.0175 (3)0.0003 (3)
S20.0405 (4)0.0839 (6)0.0467 (5)−0.0025 (4)0.0127 (4)−0.0042 (5)
S30.0454 (4)0.0380 (4)0.0333 (4)−0.0046 (3)0.0250 (3)−0.0045 (3)
S40.0435 (4)0.0368 (3)0.0357 (4)−0.0001 (3)0.0215 (3)0.0020 (3)
O10.0499 (12)0.0498 (12)0.0446 (13)−0.0110 (9)0.0321 (11)−0.0096 (10)
O20.0440 (12)0.0843 (16)0.0417 (14)−0.0211 (11)0.0244 (11)−0.0103 (13)
O30.0585 (14)0.0433 (11)0.0520 (14)0.0064 (10)0.0292 (12)0.0153 (10)
O40.0566 (14)0.0402 (11)0.0561 (15)−0.0004 (10)0.0300 (12)0.0117 (10)
N10.0505 (14)0.0356 (12)0.0407 (14)−0.0035 (10)0.0285 (12)−0.0009 (10)
N20.0473 (14)0.0528 (15)0.0324 (14)−0.0135 (12)0.0125 (12)−0.0055 (12)
N30.0408 (13)0.0452 (13)0.0427 (15)−0.0110 (11)0.0253 (12)−0.0135 (11)
N40.0355 (12)0.0631 (16)0.0361 (15)0.0073 (11)0.0160 (11)0.0018 (12)
C10.0486 (16)0.0363 (13)0.0296 (15)−0.0040 (12)0.0205 (13)0.0023 (11)
C20.0376 (14)0.0440 (15)0.0368 (17)0.0005 (12)0.0152 (13)0.0100 (12)
C30.0442 (15)0.0341 (13)0.0431 (17)0.0045 (11)0.0262 (14)0.0100 (12)
C40.0417 (15)0.0393 (14)0.0399 (17)−0.0047 (12)0.0197 (13)−0.0018 (12)
C50.0422 (15)0.0372 (13)0.0379 (16)−0.0005 (11)0.0231 (13)−0.0007 (12)
C60.0573 (19)0.0523 (17)0.0356 (17)−0.0154 (15)0.0231 (15)−0.0088 (14)
C70.0423 (15)0.0377 (14)0.0346 (16)−0.0074 (11)0.0200 (13)−0.0092 (12)
C80.0415 (15)0.0451 (15)0.0371 (16)−0.0088 (12)0.0202 (13)−0.0160 (13)
C90.0545 (19)0.0558 (18)0.058 (2)−0.0189 (15)0.0367 (18)−0.0220 (16)
C100.0378 (15)0.0480 (16)0.0438 (18)−0.0066 (12)0.0210 (14)−0.0065 (13)
C110.0480 (17)0.0491 (17)0.051 (2)0.0005 (14)0.0241 (16)−0.0003 (15)
C120.0492 (18)0.0589 (19)0.052 (2)0.0012 (15)0.0273 (17)0.0020 (16)
C130.0417 (16)0.0509 (17)0.0427 (18)0.0026 (13)0.0160 (14)−0.0075 (14)
C140.0492 (17)0.0469 (16)0.051 (2)−0.0080 (13)0.0248 (16)−0.0093 (14)
C150.0333 (13)0.0394 (14)0.0313 (15)−0.0002 (11)0.0154 (12)−0.0004 (11)
C160.0378 (14)0.0370 (13)0.0300 (15)0.0011 (11)0.0165 (12)−0.0008 (11)
C170.0444 (15)0.0408 (14)0.0382 (17)−0.0022 (12)0.0246 (14)−0.0037 (12)
C180.0568 (18)0.0523 (17)0.0413 (18)−0.0017 (14)0.0326 (16)−0.0079 (14)
C190.0574 (19)0.0482 (17)0.0459 (19)−0.0053 (14)0.0267 (16)−0.0164 (14)
C200.0425 (15)0.0432 (15)0.0402 (17)−0.0062 (12)0.0190 (14)−0.0060 (13)
C210.0363 (14)0.0389 (14)0.0347 (16)0.0012 (11)0.0178 (12)0.0008 (12)
C220.0418 (14)0.0375 (13)0.0291 (15)−0.0049 (11)0.0182 (12)−0.0040 (11)
C230.0470 (15)0.0350 (13)0.0279 (14)−0.0040 (11)0.0187 (12)−0.0023 (11)
C240.0481 (16)0.0431 (15)0.0391 (17)−0.0109 (13)0.0213 (14)−0.0024 (13)
C250.0416 (16)0.0552 (18)0.0354 (17)−0.0042 (13)0.0099 (14)0.0021 (14)
C260.0497 (17)0.0499 (17)0.0370 (18)−0.0036 (14)0.0108 (14)0.0088 (13)
C270.0449 (16)0.0456 (16)0.0359 (17)−0.0068 (13)0.0166 (14)0.0065 (13)
C280.0494 (17)0.0323 (13)0.0373 (16)−0.0010 (12)0.0255 (14)−0.0020 (11)
S1—C71.648 (3)C9—C101.506 (4)
S2—C81.665 (3)C9—H9A0.9900
S3—C161.788 (3)C9—H9B0.9900
S3—S42.0535 (10)C10—C111.375 (4)
S4—C221.796 (3)C10—C141.378 (4)
O1—C211.219 (4)C11—C121.381 (4)
O2—C211.292 (3)C11—H110.9500
O2—H1o0.84 (3)C12—H120.9500
O3—C281.220 (4)C13—C141.390 (4)
O4—C281.312 (3)C13—H130.9500
O4—H2o0.85 (3)C14—H140.9500
N1—C31.334 (4)C15—C201.404 (4)
N1—C41.338 (4)C15—C161.406 (4)
N2—C71.325 (4)C15—C211.490 (4)
N2—C61.455 (4)C16—C171.397 (4)
N2—H1n0.88 (3)C17—C181.379 (4)
N3—C81.310 (4)C17—H170.9500
N3—C91.464 (4)C18—C191.384 (4)
N3—H2n0.88 (3)C18—H180.9500
N4—C131.308 (4)C19—C201.384 (4)
N4—C121.329 (4)C19—H190.9500
C1—C51.382 (4)C20—H200.9500
C1—C21.394 (4)C22—C271.386 (4)
C1—C61.512 (4)C22—C231.411 (4)
C2—C31.382 (4)C23—C241.399 (4)
C2—H20.9500C23—C281.485 (4)
C3—H30.9500C24—C251.371 (4)
C4—C51.373 (4)C24—H240.9500
C4—H40.9500C25—C261.367 (4)
C5—H50.9500C25—H250.9500
C6—H6A0.9900C26—C271.388 (4)
C6—H6B0.9900C26—H260.9500
C7—C81.527 (4)C27—H270.9500
C16—S3—S4103.44 (10)N4—C12—C11122.0 (3)
C22—S4—S3104.86 (10)N4—C12—H12119.0
C21—O2—H1O108 (3)C11—C12—H12119.0
C28—O4—H2O98 (3)N4—C13—C14123.0 (3)
C3—N1—C4118.6 (3)N4—C13—H13118.5
C7—N2—C6124.7 (3)C14—C13—H13118.5
C7—N2—H1N113 (2)C10—C14—C13118.7 (3)
C6—N2—H1N122 (2)C10—C14—H14120.6
C8—N3—C9124.6 (3)C13—C14—H14120.6
C8—N3—H2N117 (2)C20—C15—C16119.1 (3)
C9—N3—H2N118 (2)C20—C15—C21118.8 (2)
C13—N4—C12118.7 (3)C16—C15—C21122.0 (2)
C5—C1—C2118.1 (3)C17—C16—C15119.1 (3)
C5—C1—C6121.5 (3)C17—C16—S3120.9 (2)
C2—C1—C6120.4 (3)C15—C16—S3120.0 (2)
C3—C2—C1119.4 (3)C18—C17—C16120.3 (3)
C3—C2—H2120.3C18—C17—H17119.9
C1—C2—H2120.3C16—C17—H17119.9
N1—C3—C2121.9 (3)C17—C18—C19121.6 (3)
N1—C3—H3119.0C17—C18—H18119.2
C2—C3—H3119.0C19—C18—H18119.2
N1—C4—C5122.9 (3)C20—C19—C18118.5 (3)
N1—C4—H4118.6C20—C19—H19120.7
C5—C4—H4118.6C18—C19—H19120.7
C4—C5—C1119.1 (3)C19—C20—C15121.4 (3)
C4—C5—H5120.4C19—C20—H20119.3
C1—C5—H5120.4C15—C20—H20119.3
N2—C6—C1111.3 (2)O1—C21—O2124.4 (3)
N2—C6—H6A109.4O1—C21—C15121.5 (3)
C1—C6—H6A109.4O2—C21—C15114.1 (3)
N2—C6—H6B109.4C27—C22—C23118.5 (3)
C1—C6—H6B109.4C27—C22—S4121.5 (2)
H6A—C6—H6B108.0C23—C22—S4120.1 (2)
N2—C7—C8113.5 (3)C24—C23—C22118.6 (3)
N2—C7—S1124.9 (2)C24—C23—C28119.9 (2)
C8—C7—S1121.6 (2)C22—C23—C28121.5 (3)
N3—C8—C7113.9 (3)C25—C24—C23122.0 (3)
N3—C8—S2125.8 (2)C25—C24—H24119.0
C7—C8—S2120.3 (2)C23—C24—H24119.0
N3—C9—C10115.3 (3)C26—C25—C24119.1 (3)
N3—C9—H9A108.4C26—C25—H25120.4
C10—C9—H9A108.4C24—C25—H25120.4
N3—C9—H9B108.4C25—C26—C27120.7 (3)
C10—C9—H9B108.4C25—C26—H26119.7
H9A—C9—H9B107.5C27—C26—H26119.7
C11—C10—C14117.9 (3)C22—C27—C26121.1 (3)
C11—C10—C9118.4 (3)C22—C27—H27119.4
C14—C10—C9123.7 (3)C26—C27—H27119.4
C10—C11—C12119.6 (3)O3—C28—O4124.2 (3)
C10—C11—H11120.2O3—C28—C23122.8 (3)
C12—C11—H11120.2O4—C28—C23113.0 (3)
C16—S3—S4—C2288.06 (13)C20—C15—C16—S3−177.1 (2)
C5—C1—C2—C31.1 (4)C21—C15—C16—S34.5 (4)
C6—C1—C2—C3−179.4 (3)S4—S3—C16—C17−20.3 (3)
C4—N1—C3—C2−1.3 (4)S4—S3—C16—C15158.2 (2)
C1—C2—C3—N10.3 (4)C15—C16—C17—C18−0.6 (4)
C3—N1—C4—C50.8 (4)S3—C16—C17—C18177.9 (2)
N1—C4—C5—C10.6 (4)C16—C17—C18—C19−0.5 (5)
C2—C1—C5—C4−1.5 (4)C17—C18—C19—C200.7 (5)
C6—C1—C5—C4178.9 (3)C18—C19—C20—C150.1 (5)
C7—N2—C6—C173.4 (4)C16—C15—C20—C19−1.2 (5)
C5—C1—C6—N2−139.7 (3)C21—C15—C20—C19177.3 (3)
C2—C1—C6—N240.8 (4)C20—C15—C21—O1−157.7 (3)
C6—N2—C7—C8−177.5 (3)C16—C15—C21—O120.7 (4)
C6—N2—C7—S12.1 (4)C20—C15—C21—O220.7 (4)
C9—N3—C8—C7168.0 (2)C16—C15—C21—O2−160.9 (3)
C9—N3—C8—S2−11.6 (4)S3—S4—C22—C27−3.0 (3)
N2—C7—C8—N3−162.1 (3)S3—S4—C22—C23177.0 (2)
S1—C7—C8—N318.3 (3)C27—C22—C23—C240.8 (4)
N2—C7—C8—S217.4 (3)S4—C22—C23—C24−179.2 (2)
S1—C7—C8—S2−162.20 (17)C27—C22—C23—C28−176.5 (3)
C8—N3—C9—C1098.3 (4)S4—C22—C23—C283.5 (4)
N3—C9—C10—C11146.4 (3)C22—C23—C24—C25−1.2 (4)
N3—C9—C10—C14−34.1 (5)C28—C23—C24—C25176.1 (3)
C14—C10—C11—C12−2.0 (5)C23—C24—C25—C260.3 (5)
C9—C10—C11—C12177.6 (3)C24—C25—C26—C271.1 (5)
C13—N4—C12—C11−1.0 (5)C23—C22—C27—C260.6 (5)
C10—C11—C12—N42.1 (5)S4—C22—C27—C26−179.5 (3)
C12—N4—C13—C14−0.2 (5)C25—C26—C27—C22−1.5 (5)
C11—C10—C14—C130.8 (5)C24—C23—C28—O3−175.5 (3)
C9—C10—C14—C13−178.7 (3)C22—C23—C28—O31.7 (4)
N4—C13—C14—C100.3 (5)C24—C23—C28—O43.9 (4)
C20—C15—C16—C171.4 (4)C22—C23—C28—O4−178.8 (3)
C21—C15—C16—C17−177.0 (3)
D—H···AD—HH···AD···AD—H···A
O2—H1o···N4i0.84 (3)1.73 (3)2.565 (4)168 (4)
O4—H2o···N1ii0.85 (3)1.76 (3)2.529 (3)151 (4)
N2—H1n···S20.88 (2)2.37 (2)2.930 (3)121 (2)
N3—H2n···O3iii0.88 (3)2.58 (3)3.312 (4)142 (2)
N3—H2n···S10.88 (3)2.45 (3)2.959 (3)117 (2)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O2—H1o⋯N4i0.84 (3)1.73 (3)2.565 (4)168 (4)
O4—H2o⋯N1ii0.85 (3)1.76 (3)2.529 (3)151 (4)
N2—H1n⋯S20.88 (2)2.37 (2)2.930 (3)121 (2)
N3—H2n⋯O3iii0.88 (3)2.58 (3)3.312 (4)142 (2)
N3—H2n⋯S10.88 (3)2.45 (3)2.959 (3)117 (2)

Symmetry codes: (i) ; (ii) ; (iii) .

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