Literature DB >> 21587934

(2E)-1-(2,5-Dichloro-3-thien-yl)-3-(6-meth-oxy-2-naphth-yl)prop-2-en-1-one.

Jerry P Jasinski, Albert E Pek, C S Chidan Kumar, H S Yathirajan, A N Mayekar.   

Abstract

In the title compound, C(18)H(12)Cl(2)O(2)S, the dihedral angle between the thio-phene ring and the naphthalene ring system is 2.13 (4)°. In the crystal, pairs of weak inter-molecular C-H⋯O hydrogen bonds form centrosymmetric dimers.

Entities:  

Year:  2010        PMID: 21587934      PMCID: PMC3006779          DOI: 10.1107/S1600536810022725

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the biological activity of thio­phene-containing compounds, see: Ferreira et al. (2006 ▶); Bonini et al. (2005 ▶); Kulikova et al. (1980 ▶). For the anti­radiation activity of thio­phenes, see: Hassan et al. (1998 ▶). For the synthesis and anti­microbial evaluation of new chalcones, see: Tomar et al. (2007 ▶). For the biological activity of chalcone derivatives, see: Nowakowska et al. (2007 ▶). For related structures, see: Butcher et al. (2007 ▶); Harrison et al. (2007a ▶,b ▶); Li et al. (2009 ▶); Yathirajan et al. (2006 ▶).

Experimental

Crystal data

C18H12Cl2O2S M = 363.24 Monoclinic, a = 7.3237 (5) Å b = 9.4919 (6) Å c = 22.4037 (15) Å β = 96.183 (1)° V = 1548.35 (18) Å3 Z = 4 Mo Kα radiation μ = 0.56 mm−1 T = 100 K 0.55 × 0.40 × 0.39 mm

Data collection

Bruker APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2008 ▶) T min = 0.748, T max = 0.811 17429 measured reflections 4780 independent reflections 4373 reflections with I > 2σ(I) R int = 0.021

Refinement

R[F 2 > 2σ(F 2)] = 0.030 wR(F 2) = 0.077 S = 0.97 4780 reflections 209 parameters H-atom parameters constrained Δρmax = 0.51 e Å−3 Δρmin = −0.26 e Å−3 Data collection: APEX2 (Bruker, 2008 ▶); cell refinement: SAINT (Bruker, 2008 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL and PLATON (Spek, 2009 ▶). Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536810022725/ci5100sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810022725/ci5100Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C18H12Cl2O2SF(000) = 744
Mr = 363.24Dx = 1.558 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 9959 reflections
a = 7.3237 (5) Åθ = 2.3–31.3°
b = 9.4919 (6) ŵ = 0.56 mm1
c = 22.4037 (15) ÅT = 100 K
β = 96.183 (1)°Block, yellow
V = 1548.35 (18) Å30.55 × 0.40 × 0.39 mm
Z = 4
Bruker APEXII CCD diffractometer4780 independent reflections
Radiation source: fine-focus sealed tube4373 reflections with I > 2σ(I)
graphiteRint = 0.021
ω scansθmax = 31.4°, θmin = 1.8°
Absorption correction: multi-scan (SADABS; Bruker, 2008)h = −10→10
Tmin = 0.748, Tmax = 0.811k = −13→13
17429 measured reflectionsl = −31→31
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.030Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.077H-atom parameters constrained
S = 0.97w = 1/[σ2(Fo2) + (0.0374P)2 + 1.0425P] where P = (Fo2 + 2Fc2)/3
4780 reflections(Δ/σ)max = 0.001
209 parametersΔρmax = 0.51 e Å3
0 restraintsΔρmin = −0.26 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Cl10.97320 (4)0.57727 (3)0.666046 (12)0.02001 (7)
Cl21.12452 (4)1.16879 (3)0.677155 (14)0.02261 (7)
S11.08482 (4)0.86262 (3)0.702059 (12)0.01784 (7)
O10.35474 (12)−0.11321 (9)0.30656 (4)0.01761 (16)
O20.81055 (13)0.85374 (9)0.49460 (4)0.02136 (18)
C10.93801 (15)0.81919 (11)0.59314 (5)0.01381 (19)
C20.97881 (15)0.96709 (12)0.59807 (5)0.01517 (19)
H180.95481.03070.56670.018*
C31.05603 (15)1.00339 (12)0.65347 (5)0.0166 (2)
C40.99005 (15)0.75105 (12)0.64645 (5)0.01516 (19)
C50.84960 (15)0.76639 (12)0.53422 (5)0.01448 (19)
C60.81083 (16)0.61554 (12)0.52385 (5)0.0159 (2)
H130.83910.55010.55440.019*
C70.73400 (15)0.57431 (12)0.46967 (5)0.0159 (2)
H120.71280.64480.44090.019*
C80.67971 (15)0.43260 (11)0.45033 (5)0.01457 (19)
C90.70770 (15)0.31296 (12)0.48855 (5)0.01504 (19)
H90.76500.32410.52740.018*
C100.65144 (15)0.18169 (12)0.46900 (5)0.01494 (19)
H80.67090.10500.49470.018*
C110.56360 (14)0.16097 (11)0.40986 (5)0.01316 (19)
C120.53666 (14)0.27935 (11)0.37112 (5)0.01365 (19)
C130.59605 (15)0.41327 (11)0.39266 (5)0.0152 (2)
H110.57830.49070.36730.018*
C140.50474 (15)0.02566 (11)0.38918 (5)0.01431 (19)
H20.5229−0.05220.41430.017*
C150.42044 (15)0.01046 (12)0.33156 (5)0.01419 (19)
C160.39546 (15)0.12772 (12)0.29236 (5)0.0157 (2)
H60.34020.11540.25330.019*
C170.45213 (15)0.25871 (12)0.31159 (5)0.0155 (2)
H50.43530.33500.28550.019*
C180.37100 (18)−0.23386 (13)0.34421 (6)0.0225 (2)
H1A0.4978−0.24870.35860.034*
H1B0.3246−0.31490.32180.034*
H1C0.3016−0.21960.37770.034*
U11U22U33U12U13U23
Cl10.02618 (14)0.01646 (13)0.01724 (13)0.00090 (10)0.00169 (10)0.00379 (9)
Cl20.02353 (14)0.01989 (14)0.02423 (14)−0.00595 (10)0.00179 (10)−0.00808 (10)
S10.01786 (13)0.02130 (14)0.01387 (12)−0.00047 (10)−0.00050 (9)−0.00146 (10)
O10.0221 (4)0.0145 (4)0.0154 (4)−0.0021 (3)−0.0015 (3)−0.0017 (3)
O20.0305 (5)0.0157 (4)0.0167 (4)−0.0021 (3)−0.0032 (3)0.0020 (3)
C10.0133 (4)0.0139 (4)0.0142 (4)−0.0005 (3)0.0019 (3)−0.0009 (4)
C20.0150 (5)0.0142 (5)0.0163 (5)−0.0010 (4)0.0016 (4)−0.0012 (4)
C30.0154 (5)0.0164 (5)0.0181 (5)−0.0025 (4)0.0022 (4)−0.0029 (4)
C40.0150 (5)0.0154 (5)0.0151 (5)−0.0006 (4)0.0016 (4)−0.0007 (4)
C50.0143 (5)0.0147 (5)0.0145 (4)−0.0014 (4)0.0017 (3)−0.0010 (4)
C60.0189 (5)0.0129 (5)0.0156 (5)−0.0005 (4)0.0009 (4)0.0005 (4)
C70.0173 (5)0.0141 (5)0.0161 (5)−0.0003 (4)0.0015 (4)0.0000 (4)
C80.0145 (5)0.0139 (5)0.0154 (5)−0.0005 (4)0.0020 (4)−0.0006 (4)
C90.0163 (5)0.0156 (5)0.0128 (4)−0.0007 (4)−0.0004 (4)−0.0003 (4)
C100.0164 (5)0.0146 (5)0.0134 (4)0.0003 (4)−0.0004 (4)0.0016 (4)
C110.0122 (4)0.0142 (5)0.0131 (4)0.0002 (3)0.0013 (3)−0.0002 (3)
C120.0127 (4)0.0148 (5)0.0135 (4)0.0008 (4)0.0012 (3)0.0000 (4)
C130.0170 (5)0.0135 (5)0.0148 (5)0.0001 (4)0.0010 (4)0.0014 (4)
C140.0154 (5)0.0138 (5)0.0134 (4)0.0000 (4)0.0003 (3)0.0004 (4)
C150.0131 (4)0.0147 (5)0.0148 (5)−0.0003 (4)0.0018 (3)−0.0019 (4)
C160.0152 (5)0.0187 (5)0.0130 (4)0.0007 (4)0.0000 (4)−0.0006 (4)
C170.0166 (5)0.0170 (5)0.0126 (4)0.0007 (4)0.0004 (4)0.0016 (4)
C180.0285 (6)0.0152 (5)0.0223 (6)−0.0033 (4)−0.0042 (5)0.0007 (4)
Cl1—C41.7148 (12)C9—C101.3694 (15)
Cl2—C31.7148 (12)C9—H90.93
S1—C31.7220 (12)C10—C111.4230 (15)
S1—C41.7231 (11)C10—H80.93
O1—C151.3657 (13)C11—C141.4167 (15)
O1—C181.4198 (14)C11—C121.4206 (15)
O2—C51.2257 (14)C12—C131.4116 (15)
C1—C41.3756 (15)C12—C171.4220 (15)
C1—C21.4371 (15)C13—H110.93
C1—C51.4930 (15)C14—C151.3772 (15)
C2—C31.3519 (15)C14—H20.93
C2—H180.93C15—C161.4174 (15)
C5—C61.4732 (15)C16—C171.3658 (16)
C6—C71.3403 (15)C16—H60.93
C6—H130.93C17—H50.93
C7—C81.4553 (15)C18—H1A0.96
C7—H120.93C18—H1B0.96
C8—C131.3811 (15)C18—H1C0.96
C8—C91.4238 (15)
C3—S1—C490.43 (5)C9—C10—H8119.5
C15—O1—C18116.50 (9)C11—C10—H8119.5
C4—C1—C2110.89 (10)C14—C11—C12120.00 (10)
C4—C1—C5131.54 (10)C14—C11—C10121.40 (10)
C2—C1—C5117.57 (10)C12—C11—C10118.60 (10)
C3—C2—C1112.49 (10)C13—C12—C11119.07 (10)
C3—C2—H18123.8C13—C12—C17122.12 (10)
C1—C2—H18123.8C11—C12—C17118.80 (10)
C2—C3—Cl2126.65 (9)C8—C13—C12121.93 (10)
C2—C3—S1113.15 (9)C8—C13—H11119.0
Cl2—C3—S1120.20 (7)C12—C13—H11119.0
C1—C4—Cl1130.82 (9)C15—C14—C11119.43 (10)
C1—C4—S1113.03 (8)C15—C14—H2120.3
Cl1—C4—S1116.14 (6)C11—C14—H2120.3
O2—C5—C6121.16 (10)O1—C15—C14125.24 (10)
O2—C5—C1117.28 (10)O1—C15—C16113.86 (9)
C6—C5—C1121.57 (10)C14—C15—C16120.89 (10)
C7—C6—C5118.79 (10)C17—C16—C15120.32 (10)
C7—C6—H13120.6C17—C16—H6119.8
C5—C6—H13120.6C15—C16—H6119.8
C6—C7—C8127.89 (10)C16—C17—C12120.54 (10)
C6—C7—H12116.1C16—C17—H5119.7
C8—C7—H12116.1C12—C17—H5119.7
C13—C8—C9118.50 (10)O1—C18—H1A109.5
C13—C8—C7118.74 (10)O1—C18—H1B109.5
C9—C8—C7122.76 (10)H1A—C18—H1B109.5
C10—C9—C8120.97 (10)O1—C18—H1C109.5
C10—C9—H9119.5H1A—C18—H1C109.5
C8—C9—H9119.5H1B—C18—H1C109.5
C9—C10—C11120.92 (10)
C4—C1—C2—C3−0.59 (14)C8—C9—C10—C110.10 (17)
C5—C1—C2—C3179.12 (10)C9—C10—C11—C14−179.96 (10)
C1—C2—C3—Cl2179.91 (8)C9—C10—C11—C120.54 (16)
C1—C2—C3—S10.38 (13)C14—C11—C12—C13179.89 (10)
C4—S1—C3—C2−0.07 (9)C10—C11—C12—C13−0.61 (15)
C4—S1—C3—Cl2−179.63 (8)C14—C11—C12—C17−0.70 (16)
C2—C1—C4—Cl1179.61 (9)C10—C11—C12—C17178.80 (10)
C5—C1—C4—Cl1−0.04 (19)C9—C8—C13—C120.61 (17)
C2—C1—C4—S10.53 (12)C7—C8—C13—C12−178.84 (10)
C5—C1—C4—S1−179.12 (10)C11—C12—C13—C80.03 (16)
C3—S1—C4—C1−0.28 (9)C17—C12—C13—C8−179.36 (10)
C3—S1—C4—Cl1−179.50 (7)C12—C11—C14—C15−0.45 (16)
C4—C1—C5—O2176.66 (12)C10—C11—C14—C15−179.94 (10)
C2—C1—C5—O2−2.97 (15)C18—O1—C15—C141.95 (16)
C4—C1—C5—C6−3.43 (18)C18—O1—C15—C16−178.24 (10)
C2—C1—C5—C6176.94 (10)C11—C14—C15—O1−178.83 (10)
O2—C5—C6—C71.01 (17)C11—C14—C15—C161.37 (16)
C1—C5—C6—C7−178.90 (10)O1—C15—C16—C17179.05 (10)
C5—C6—C7—C8−178.11 (11)C14—C15—C16—C17−1.13 (17)
C6—C7—C8—C13177.68 (12)C15—C16—C17—C12−0.06 (17)
C6—C7—C8—C9−1.74 (19)C13—C12—C17—C16−179.65 (10)
C13—C8—C9—C10−0.68 (17)C11—C12—C17—C160.96 (16)
C7—C8—C9—C10178.74 (11)
D—H···AD—HH···AD···AD—H···A
C2—H18···O2i0.932.563.2051 (14)127
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C2—H18⋯O2i0.932.563.2051 (14)127

Symmetry code: (i) .

  7 in total

Review 1.  A review of anti-infective and anti-inflammatory chalcones.

Authors:  Zdzisława Nowakowska
Journal:  Eur J Med Chem       Date:  2006-11-15       Impact factor: 6.514

2.  Evaluation of the antioxidant properties of diarylamines in the benzo[b]thiophene series by free radical scavenging activity and reducing power.

Authors:  Isabel C F R Ferreira; Maria-João R P Queiroz; Miguel Vilas-Boas; Letícia M Estevinho; Agathe Begouin; Gilbert Kirsch
Journal:  Bioorg Med Chem Lett       Date:  2005-12-01       Impact factor: 2.823

3.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

4.  New thiophene analogues of kenpaullone: synthesis and biological evaluation in breast cancer cells.

Authors:  Laurent Brault; Evelyne Migianu; Adrien Néguesque; Eric Battaglia; Denyse Bagrel; Gilbert Kirsch
Journal:  Eur J Med Chem       Date:  2005-04-12       Impact factor: 6.514

5.  Synthesis and antimicrobial evaluation of new chalcones containing piperazine or 2,5-dichlorothiophene moiety.

Authors:  V Tomar; G Bhattacharjee; Ashok Kumar
Journal:  Bioorg Med Chem Lett       Date:  2007-08-15       Impact factor: 2.823

6.  Ethyl 6-(6-meth-oxy-2-naphth-yl)-2-oxo-4-(2-thien-yl)cyclo-hex-3-ene-1-carboxyl-ate.

Authors:  Hongqi Li; Anil N Mayekar; B Narayana; H S Yathirajan; W T A Harrison
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-06-10

7.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20
  7 in total
  4 in total

1.  (E)-1-(2,5-Dichloro-3-thien-yl)-3-(3,4-dimeth-oxy-phen-yl)prop-2-en-1-one.

Authors:  William T A Harrison; C S Chidan Kumar; H S Yathirajan; A N Mayekar; B Narayana
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-09-04

2.  1-(2,5-Dichloro-3-thien-yl)ethanone: infinite sheets mediated by O⋯Cl halogen bonds.

Authors:  William T A Harrison; C S Chidan Kumar; H S Yathirajan; A N Mayekar; B Narayana
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-09-04

3.  Crystal structure and Hirshfeld surface analysis of (E)-3-(2-chloro-4-fluoro-phen-yl)-1-(2,5-di-chloro-thio-phen-3-yl)prop-2-en-1-one.

Authors:  T N Sanjeeva Murthy; S Naveen; C S Chidan Kumar; M K Veeraiah; Ching Kheng Quah; B P Siddaraju; Ismail Warad
Journal:  Acta Crystallogr E Crystallogr Commun       Date:  2018-07-24

4.  Crystal structure and Hirshfeld surface analysis of (2E)-3-(2,4-di-chloro-phen-yl)-1-(2,5-di-chloro-thio-phen-3-yl)prop-2-en-1-one.

Authors:  T N Sanjeeva Murthy; Zeliha Atioğlu; Mehmet Akkurt; C S Chidan Kumar; M K Veeraiah; Ching Kheng Quah; B P Siddaraju
Journal:  Acta Crystallogr E Crystallogr Commun       Date:  2018-08-10
  4 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.