Literature DB >> 21587480

(E)-1-(2,5-Dichloro-3-thien-yl)-3-(3,4-dimeth-oxy-phen-yl)prop-2-en-1-one.

William T A Harrison, C S Chidan Kumar, H S Yathirajan, A N Mayekar, B Narayana.   

Abstract

In the title compound, C(15)H(12)Cl(2)O(3)S, the prop-2-en-1-one (enone) fragment is almost planar [C-C-C-O = 2.2 (4)°] and it subtends dihedral angles of 11.9 (2) and 11.0 (2)° with the thio-phene and benzene rings, respectively. The dihedral angle between the aromatic rings is 3.47 (16)°. In the crystal, weak C-H⋯O and C-H⋯Cl inter-actions link the mol-ecules, leading to R(2) (2)(14), R(2) (2)(24) and C(11) supra-molecular motifs occurring within the three-dimensional network. Weak aromatic π-π stacking [centroid-centroid separations = 3.6823 (15) and 3.8722 (15) Å] may also help to consolidate the packing.

Entities:  

Year:  2010        PMID: 21587480      PMCID: PMC2983303          DOI: 10.1107/S1600536810035142

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For a related structure and background references, see: Jasinski et al. (2010 ▶). For reference structural data, see: Allen et al. (1987 ▶).

Experimental

Crystal data

C15H12Cl2O3S M = 343.21 Monoclinic, a = 8.9331 (2) Å b = 8.9997 (2) Å c = 18.8210 (5) Å β = 100.181 (1)° V = 1489.29 (6) Å3 Z = 4 Mo Kα radiation μ = 0.58 mm−1 T = 120 K 0.24 × 0.12 × 0.10 mm

Data collection

Nonius KappaCCD diffractometer Absorption correction: multi-scan [SADABS (Bruker, 2003 ▶) and Blessing (1995 ▶)] T min = 0.873, T max = 0.944 22032 measured reflections 3424 independent reflections 2834 reflections with I > 2σ(I) R int = 0.056

Refinement

R[F 2 > 2σ(F 2)] = 0.048 wR(F 2) = 0.113 S = 1.10 3424 reflections 193 parameters H-atom parameters constrained Δρmax = 0.72 e Å−3 Δρmin = −0.41 e Å−3 Data collection: COLLECT (Nonius, 1998 ▶); cell refinement: COLLECT; data reduction: DENZO (Otwinowski & Minor, 1997 ▶); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 (Farrugia, 1997 ▶); software used to prepare material for publication: publCIF (Westrip, 2010 ▶). Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536810035142/ng5014sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810035142/ng5014Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C15H12Cl2O3SF(000) = 704
Mr = 343.21Dx = 1.531 Mg m3
Monoclinic, P21/nMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ynCell parameters from 20728 reflections
a = 8.9331 (2) Åθ = 2.9–27.5°
b = 8.9997 (2) ŵ = 0.58 mm1
c = 18.8210 (5) ÅT = 120 K
β = 100.181 (1)°Fragment, yellow
V = 1489.29 (6) Å30.24 × 0.12 × 0.10 mm
Z = 4
Nonius KappaCCD diffractometer3424 independent reflections
Radiation source: fine-focus sealed tube2834 reflections with I > 2σ(I)
graphiteRint = 0.056
ω and φ scansθmax = 27.6°, θmin = 3.2°
Absorption correction: multi-scan [SADABS (Bruker, 2003) and Blessing (1995)]h = −11→11
Tmin = 0.873, Tmax = 0.944k = −11→11
22032 measured reflectionsl = −24→24
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.048H-atom parameters constrained
wR(F2) = 0.113w = 1/[σ2(Fo2) + (0.034P)2 + 1.9239P] where P = (Fo2 + 2Fc2)/3
S = 1.10(Δ/σ)max < 0.001
3424 reflectionsΔρmax = 0.72 e Å3
193 parametersΔρmin = −0.41 e Å3
0 restraintsExtinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methodsExtinction coefficient: 0.011 (2)
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
C10.4943 (3)0.2226 (3)0.72975 (12)0.0218 (5)
C20.5681 (3)0.2506 (3)0.67246 (14)0.0253 (5)
H20.66320.20500.67050.030*
C30.5013 (3)0.3471 (3)0.61723 (14)0.0273 (5)
H30.55120.36440.57740.033*
C40.3644 (3)0.4175 (3)0.61939 (13)0.0248 (5)
C50.2908 (3)0.3901 (3)0.67817 (13)0.0227 (5)
H50.19770.43880.68090.027*
C60.3533 (3)0.2927 (3)0.73192 (12)0.0207 (5)
C70.2948 (3)0.5123 (3)0.55890 (14)0.0269 (5)
H70.34590.51420.51870.032*
C80.1686 (3)0.5971 (3)0.55235 (13)0.0232 (5)
H80.11540.60270.59180.028*
C90.1115 (3)0.6799 (3)0.48719 (13)0.0230 (5)
C10−0.0865 (3)0.8706 (3)0.43372 (13)0.0217 (5)
C11−0.0291 (3)0.7698 (3)0.48589 (12)0.0213 (5)
C12−0.1241 (3)0.7591 (3)0.53941 (13)0.0265 (5)
H12−0.10350.69550.58030.032*
C13−0.2457 (3)0.8490 (3)0.52538 (14)0.0298 (6)
C140.6852 (3)0.0533 (3)0.78546 (16)0.0382 (7)
H14A0.7073−0.01280.82740.057*
H14B0.76720.12640.78750.057*
H14C0.6776−0.00530.74110.057*
C150.1441 (3)0.3186 (3)0.79360 (15)0.0317 (6)
H15A0.10870.28190.83680.047*
H15B0.07090.29050.75050.047*
H15C0.15320.42700.79600.047*
O10.5440 (2)0.1289 (2)0.78610 (9)0.0284 (4)
O20.28886 (19)0.25494 (19)0.78990 (9)0.0265 (4)
O30.1727 (2)0.6738 (2)0.43354 (10)0.0417 (5)
S1−0.25196 (7)0.95280 (7)0.44816 (4)0.02811 (19)
Cl1−0.01562 (8)0.92675 (7)0.35926 (3)0.03212 (19)
Cl2−0.38786 (8)0.86816 (11)0.57543 (4)0.0513 (3)
U11U22U33U12U13U23
C10.0237 (11)0.0212 (12)0.0189 (11)−0.0020 (9)−0.0004 (9)−0.0012 (9)
C20.0203 (11)0.0268 (13)0.0298 (13)−0.0032 (10)0.0076 (10)−0.0045 (10)
C30.0309 (13)0.0281 (13)0.0250 (13)−0.0083 (11)0.0105 (10)0.0000 (10)
C40.0299 (13)0.0216 (12)0.0238 (12)−0.0040 (10)0.0073 (10)0.0007 (10)
C50.0266 (12)0.0204 (12)0.0213 (12)−0.0007 (9)0.0050 (10)−0.0023 (9)
C60.0256 (11)0.0190 (11)0.0182 (11)−0.0033 (9)0.0056 (9)−0.0021 (9)
C70.0264 (12)0.0298 (14)0.0260 (13)−0.0011 (10)0.0084 (10)0.0025 (10)
C80.0204 (11)0.0237 (12)0.0267 (12)0.0006 (9)0.0074 (10)−0.0039 (10)
C90.0220 (11)0.0271 (13)0.0208 (12)0.0034 (10)0.0062 (9)−0.0009 (10)
C100.0195 (11)0.0242 (12)0.0211 (12)0.0005 (9)0.0025 (9)−0.0032 (9)
C110.0213 (11)0.0247 (12)0.0180 (11)0.0003 (9)0.0040 (9)−0.0030 (9)
C120.0261 (12)0.0357 (14)0.0181 (12)0.0048 (11)0.0051 (10)−0.0003 (10)
C130.0265 (12)0.0410 (15)0.0232 (13)0.0034 (11)0.0077 (10)−0.0050 (11)
C140.0296 (14)0.0439 (17)0.0400 (16)0.0158 (12)0.0033 (12)0.0039 (13)
C150.0320 (13)0.0358 (15)0.0307 (14)0.0038 (11)0.0152 (11)−0.0037 (11)
O10.0297 (9)0.0313 (10)0.0242 (9)0.0095 (8)0.0045 (7)0.0036 (7)
O20.0308 (9)0.0277 (9)0.0230 (9)0.0043 (7)0.0106 (7)0.0036 (7)
O30.0426 (11)0.0582 (14)0.0277 (10)0.0238 (10)0.0159 (9)0.0103 (9)
S10.0233 (3)0.0303 (4)0.0296 (3)0.0064 (3)0.0016 (2)−0.0019 (3)
Cl10.0378 (4)0.0324 (4)0.0278 (3)−0.0019 (3)0.0102 (3)0.0059 (3)
Cl20.0363 (4)0.0820 (6)0.0411 (4)0.0219 (4)0.0215 (3)0.0036 (4)
C1—O11.367 (3)C9—C111.491 (3)
C1—C21.383 (3)C10—C111.368 (3)
C1—C61.415 (3)C10—Cl11.713 (2)
C2—C31.404 (4)C10—S11.717 (2)
C2—H20.9500C11—C121.430 (3)
C3—C41.385 (4)C12—C131.343 (4)
C3—H30.9500C12—H120.9500
C4—C51.405 (3)C13—Cl21.718 (3)
C4—C71.470 (3)C13—S11.720 (3)
C5—C61.380 (3)C14—O11.435 (3)
C5—H50.9500C14—H14A0.9800
C6—O21.364 (3)C14—H14B0.9800
C7—C81.348 (3)C14—H14C0.9800
C7—H70.9500C15—O21.427 (3)
C8—C91.448 (3)C15—H15A0.9800
C8—H80.9500C15—H15B0.9800
C9—O31.231 (3)C15—H15C0.9800
O1—C1—C2125.7 (2)C11—C10—Cl1129.58 (18)
O1—C1—C6114.9 (2)C11—C10—S1113.31 (18)
C2—C1—C6119.4 (2)Cl1—C10—S1117.10 (14)
C1—C2—C3119.4 (2)C10—C11—C12110.9 (2)
C1—C2—H2120.3C10—C11—C9125.4 (2)
C3—C2—H2120.3C12—C11—C9123.7 (2)
C4—C3—C2121.5 (2)C13—C12—C11112.4 (2)
C4—C3—H3119.2C13—C12—H12123.8
C2—C3—H3119.2C11—C12—H12123.8
C3—C4—C5118.8 (2)C12—C13—Cl2127.1 (2)
C3—C4—C7119.9 (2)C12—C13—S1113.43 (19)
C5—C4—C7121.3 (2)Cl2—C13—S1119.47 (16)
C6—C5—C4120.3 (2)O1—C14—H14A109.5
C6—C5—H5119.9O1—C14—H14B109.5
C4—C5—H5119.9H14A—C14—H14B109.5
O2—C6—C5124.9 (2)O1—C14—H14C109.5
O2—C6—C1114.6 (2)H14A—C14—H14C109.5
C5—C6—C1120.6 (2)H14B—C14—H14C109.5
C8—C7—C4129.2 (2)O2—C15—H15A109.5
C8—C7—H7115.4O2—C15—H15B109.5
C4—C7—H7115.4H15A—C15—H15B109.5
C7—C8—C9122.1 (2)O2—C15—H15C109.5
C7—C8—H8118.9H15A—C15—H15C109.5
C9—C8—H8118.9H15B—C15—H15C109.5
O3—C9—C8122.1 (2)C1—O1—C14116.9 (2)
O3—C9—C11120.4 (2)C6—O2—C15116.97 (19)
C8—C9—C11117.5 (2)C10—S1—C1389.97 (12)
O1—C1—C2—C3178.3 (2)S1—C10—C11—C120.2 (3)
C6—C1—C2—C3−0.5 (4)Cl1—C10—C11—C9−2.3 (4)
C1—C2—C3—C41.3 (4)S1—C10—C11—C9179.10 (19)
C2—C3—C4—C5−0.5 (4)O3—C9—C11—C10−12.1 (4)
C2—C3—C4—C7−177.2 (2)C8—C9—C11—C10170.1 (2)
C3—C4—C5—C6−1.1 (4)O3—C9—C11—C12166.6 (3)
C7—C4—C5—C6175.6 (2)C8—C9—C11—C12−11.1 (4)
C4—C5—C6—O2−177.8 (2)C10—C11—C12—C130.4 (3)
C4—C5—C6—C11.9 (4)C9—C11—C12—C13−178.6 (2)
O1—C1—C6—O2−0.3 (3)C11—C12—C13—Cl2179.3 (2)
C2—C1—C6—O2178.7 (2)C11—C12—C13—S1−0.8 (3)
O1—C1—C6—C5179.9 (2)C2—C1—O1—C140.1 (4)
C2—C1—C6—C5−1.1 (3)C6—C1—O1—C14178.9 (2)
C3—C4—C7—C8−175.4 (3)C5—C6—O2—C151.8 (3)
C5—C4—C7—C88.0 (4)C1—C6—O2—C15−178.0 (2)
C4—C7—C8—C9−177.4 (2)C11—C10—S1—C13−0.5 (2)
C7—C8—C9—O32.2 (4)Cl1—C10—S1—C13−179.29 (16)
C7—C8—C9—C11179.9 (2)C12—C13—S1—C100.7 (2)
Cl1—C10—C11—C12178.78 (19)Cl2—C13—S1—C10−179.34 (18)
D—H···AD—HH···AD···AD—H···A
C3—H3···O3i0.952.533.227 (3)130
C12—H12···O1ii0.952.553.441 (3)157
C14—H14A···O3iii0.982.533.474 (3)161
C15—H15B···Cl1iv0.982.823.647 (3)142
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C3—H3⋯O3i0.952.533.227 (3)130
C12—H12⋯O1ii0.952.553.441 (3)157
C14—H14A⋯O3iii0.982.533.474 (3)161
C15—H15B⋯Cl1iv0.982.823.647 (3)142

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .

  3 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  An empirical correction for absorption anisotropy.

Authors:  R H Blessing
Journal:  Acta Crystallogr A       Date:  1995-01-01       Impact factor: 2.290

3.  (2E)-1-(2,5-Dichloro-3-thien-yl)-3-(6-meth-oxy-2-naphth-yl)prop-2-en-1-one.

Authors:  Jerry P Jasinski; Albert E Pek; C S Chidan Kumar; H S Yathirajan; A N Mayekar
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-06-18
  3 in total
  2 in total

1.  Crystal structure and Hirshfeld surface analysis of (E)-3-(2-chloro-4-fluoro-phen-yl)-1-(2,5-di-chloro-thio-phen-3-yl)prop-2-en-1-one.

Authors:  T N Sanjeeva Murthy; S Naveen; C S Chidan Kumar; M K Veeraiah; Ching Kheng Quah; B P Siddaraju; Ismail Warad
Journal:  Acta Crystallogr E Crystallogr Commun       Date:  2018-07-24

2.  Crystal structure and Hirshfeld surface analysis of (2E)-3-(2,4-di-chloro-phen-yl)-1-(2,5-di-chloro-thio-phen-3-yl)prop-2-en-1-one.

Authors:  T N Sanjeeva Murthy; Zeliha Atioğlu; Mehmet Akkurt; C S Chidan Kumar; M K Veeraiah; Ching Kheng Quah; B P Siddaraju
Journal:  Acta Crystallogr E Crystallogr Commun       Date:  2018-08-10
  2 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.