Literature DB >> 21587880

(E)-N'-(4-Hy-droxy-benzyl-idene)-2-nitro-benzohydrazide.

Shi-Yong Liu, Zhonglu You.   

Abstract

In the title compound, C(14)H(11)N(3)O(4), the two benzene rings form a dihedral angle of 45.3 (3)°. The nitro group is twisted out of the attached ring by a dihedral angle of 37.5 (3)°. In the crystal structure, mol-ecules are linked into a two-dimensional network parallel to (100) by O-H⋯O and N-H⋯O hydrogen bonds.

Entities:  

Year:  2010        PMID: 21587880      PMCID: PMC3006755          DOI: 10.1107/S1600536810022075

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the medicinal applications of hydrazone compounds, see: Hillmer et al. (2010 ▶); Zhu et al. (2009 ▶); Jimenez-Pulido et al. (2008 ▶); Raj et al. (2007 ▶); Zhong et al. (2007 ▶). For the crystal structures of hydrazones, see: Khaledi et al. (2009 ▶); Warad et al. (2009 ▶); Back et al. (2009 ▶); Vijayakumar et al. (2009 ▶). For related structures, see: Cao (2009 ▶); Xu et al. (2009 ▶); Shafiq et al. (2009 ▶).

Experimental

Crystal data

C14H11N3O4 M = 285.26 Orthorhombic, a = 7.720 (2) Å b = 11.398 (3) Å c = 15.072 (5) Å V = 1326.3 (7) Å3 Z = 4 Mo Kα radiation μ = 0.11 mm−1 T = 298 K 0.20 × 0.18 × 0.18 mm

Data collection

Bruker SMART CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2001 ▶) T min = 0.979, T max = 0.981 7745 measured reflections 1602 independent reflections 961 reflections with I > 2σ(I) R int = 0.085

Refinement

R[F 2 > 2σ(F 2)] = 0.048 wR(F 2) = 0.125 S = 1.02 1602 reflections 194 parameters 1 restraint H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.25 e Å−3 Δρmin = −0.18 e Å−3 Data collection: SMART (Bruker, 2007 ▶); cell refinement: SAINT (Bruker, 2007 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536810022075/ci5099sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810022075/ci5099Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C14H11N3O4F(000) = 592
Mr = 285.26Dx = 1.429 Mg m3
Orthorhombic, P212121Mo Kα radiation, λ = 0.71073 Å
Hall symbol: P 2ac 2abCell parameters from 633 reflections
a = 7.720 (2) Åθ = 2.5–24.5°
b = 11.398 (3) ŵ = 0.11 mm1
c = 15.072 (5) ÅT = 298 K
V = 1326.3 (7) Å3Block, colourless
Z = 40.20 × 0.18 × 0.18 mm
Bruker SMART CCD area-detector diffractometer1602 independent reflections
Radiation source: fine-focus sealed tube961 reflections with I > 2σ(I)
graphiteRint = 0.085
ω scansθmax = 26.6°, θmin = 2.2°
Absorption correction: multi-scan (SADABS; Bruker, 2001)h = −8→9
Tmin = 0.979, Tmax = 0.981k = −14→13
7745 measured reflectionsl = −18→18
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.048Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.125H atoms treated by a mixture of independent and constrained refinement
S = 1.02w = 1/[σ2(Fo2) + (0.0542P)2] where P = (Fo2 + 2Fc2)/3
1602 reflections(Δ/σ)max = 0.001
194 parametersΔρmax = 0.25 e Å3
1 restraintΔρmin = −0.18 e Å3
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
N10.1071 (5)0.7318 (3)1.03691 (19)0.0490 (10)
N20.1251 (5)0.7909 (3)0.9568 (2)0.0486 (9)
N30.2475 (6)1.1354 (4)0.9364 (3)0.0729 (13)
O10.1478 (4)0.3516 (2)1.34410 (16)0.0478 (8)
H10.08260.37841.38200.072*
O20.0109 (4)0.9556 (2)1.01482 (16)0.0498 (8)
O30.3197 (5)1.0807 (4)0.9939 (2)0.0846 (12)
O40.2255 (9)1.2411 (4)0.9389 (3)0.151 (2)
C10.1311 (5)0.5519 (3)1.1159 (2)0.0386 (9)
C20.0734 (5)0.5986 (3)1.1956 (2)0.0415 (10)
H20.03060.67491.19710.050*
C30.0787 (5)0.5334 (3)1.2728 (3)0.0411 (10)
H30.04180.56571.32620.049*
C40.1396 (5)0.4197 (3)1.2695 (2)0.0362 (9)
C50.1956 (5)0.3714 (3)1.1908 (3)0.0428 (10)
H50.23670.29481.18920.051*
C60.1902 (5)0.4375 (3)1.1148 (2)0.0428 (10)
H60.22710.40471.06160.051*
C70.1348 (6)0.6220 (4)1.0351 (2)0.0452 (10)
H70.15790.58560.98120.054*
C80.0819 (5)0.9035 (3)0.9539 (2)0.0406 (10)
C90.1145 (5)0.9615 (3)0.8660 (2)0.0385 (9)
C100.1817 (6)1.0730 (4)0.8584 (3)0.0470 (11)
C110.1996 (6)1.1296 (4)0.7788 (3)0.0570 (12)
H110.24461.20520.77620.068*
C120.1495 (7)1.0721 (5)0.7024 (3)0.0649 (14)
H120.16181.10880.64770.078*
C130.0821 (6)0.9617 (4)0.7068 (3)0.0609 (13)
H130.04950.92280.65520.073*
C140.0624 (5)0.9078 (4)0.7889 (2)0.0468 (11)
H140.01270.83360.79170.056*
H2A0.189 (5)0.755 (4)0.915 (2)0.080*
U11U22U33U12U13U23
N10.076 (3)0.0396 (19)0.0313 (18)0.0082 (19)0.0090 (19)0.0098 (15)
N20.073 (3)0.040 (2)0.0327 (19)0.008 (2)0.016 (2)0.0108 (15)
N30.095 (4)0.056 (3)0.067 (3)−0.013 (3)0.011 (3)−0.006 (2)
O10.065 (2)0.0454 (16)0.0334 (15)0.0081 (15)0.0097 (14)0.0069 (12)
O20.068 (2)0.0442 (16)0.0377 (15)0.0063 (16)0.0144 (15)−0.0023 (13)
O30.087 (3)0.112 (3)0.055 (2)−0.020 (3)−0.0063 (19)−0.009 (2)
O40.262 (7)0.056 (3)0.133 (4)−0.013 (3)−0.004 (4)−0.027 (3)
C10.049 (2)0.033 (2)0.034 (2)0.001 (2)0.0034 (19)0.0029 (16)
C20.055 (3)0.035 (2)0.034 (2)0.006 (2)0.0031 (19)0.0018 (17)
C30.051 (3)0.041 (2)0.032 (2)0.002 (2)0.0087 (18)−0.0002 (18)
C40.041 (2)0.038 (2)0.0303 (19)−0.007 (2)0.0019 (18)0.0099 (17)
C50.057 (3)0.031 (2)0.041 (2)0.002 (2)−0.001 (2)−0.0005 (18)
C60.056 (3)0.041 (2)0.032 (2)0.000 (2)0.0040 (18)−0.0034 (18)
C70.059 (3)0.046 (2)0.031 (2)0.003 (2)0.005 (2)0.0022 (17)
C80.050 (3)0.039 (2)0.033 (2)0.001 (2)0.0062 (19)0.0045 (18)
C90.047 (2)0.034 (2)0.034 (2)0.009 (2)0.0043 (19)−0.0001 (17)
C100.053 (3)0.044 (2)0.043 (2)0.008 (2)0.008 (2)0.001 (2)
C110.060 (3)0.045 (3)0.067 (3)−0.003 (2)0.013 (2)0.019 (2)
C120.073 (3)0.072 (3)0.049 (3)0.017 (3)0.011 (3)0.030 (3)
C130.073 (3)0.074 (3)0.036 (3)0.013 (3)0.000 (2)0.004 (2)
C140.056 (3)0.045 (2)0.039 (2)0.003 (2)0.0006 (19)0.0037 (19)
N1—C71.270 (4)C4—C51.377 (5)
N1—N21.389 (4)C5—C61.372 (5)
N2—C81.327 (5)C5—H50.93
N2—H2A0.90 (1)C6—H60.93
N3—O31.204 (5)C7—H70.93
N3—O41.217 (5)C8—C91.501 (5)
N3—C101.466 (6)C9—C141.374 (5)
O1—C41.368 (4)C9—C101.377 (5)
O1—H10.82C10—C111.369 (5)
O2—C81.224 (4)C11—C121.379 (6)
C1—C61.381 (5)C11—H110.93
C1—C21.388 (5)C12—C131.363 (7)
C1—C71.457 (5)C12—H120.93
C2—C31.381 (5)C13—C141.390 (5)
C2—H20.93C13—H130.93
C3—C41.380 (5)C14—H140.93
C3—H30.93
C7—N1—N2116.2 (3)C1—C6—H6119.4
C8—N2—N1118.2 (3)N1—C7—C1121.3 (3)
C8—N2—H2A123 (3)N1—C7—H7119.3
N1—N2—H2A117 (3)C1—C7—H7119.3
O3—N3—O4123.7 (5)O2—C8—N2123.9 (3)
O3—N3—C10119.1 (4)O2—C8—C9121.5 (3)
O4—N3—C10117.2 (5)N2—C8—C9114.4 (3)
C4—O1—H1109.5C14—C9—C10116.8 (4)
C6—C1—C2118.6 (3)C14—C9—C8120.0 (4)
C6—C1—C7120.1 (3)C10—C9—C8123.0 (3)
C2—C1—C7121.3 (3)C11—C10—C9123.2 (4)
C3—C2—C1120.9 (3)C11—C10—N3116.0 (4)
C3—C2—H2119.6C9—C10—N3120.7 (4)
C1—C2—H2119.6C10—C11—C12118.6 (4)
C4—C3—C2119.0 (3)C10—C11—H11120.7
C4—C3—H3120.5C12—C11—H11120.7
C2—C3—H3120.5C13—C12—C11120.4 (4)
O1—C4—C5117.8 (3)C13—C12—H12119.8
O1—C4—C3121.3 (3)C11—C12—H12119.8
C5—C4—C3120.9 (3)C12—C13—C14119.5 (4)
C6—C5—C4119.4 (3)C12—C13—H13120.2
C6—C5—H5120.3C14—C13—H13120.2
C4—C5—H5120.3C9—C14—C13121.6 (4)
C5—C6—C1121.2 (4)C9—C14—H14119.2
C5—C6—H6119.4C13—C14—H14119.2
D—H···AD—HH···AD···AD—H···A
O1—H1···O2i0.821.932.725 (3)164
N2—H2A···O1ii0.90 (1)2.05 (2)2.932 (4)166 (4)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O1—H1⋯O2i0.821.932.725 (3)164
N2—H2A⋯O1ii0.90 (1)2.05 (2)2.932 (4)166 (4)

Symmetry codes: (i) ; (ii) .

  10 in total

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Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-09-09

4.  3,4,5-Trihydr-oxy-N'-[(1-methyl-1H-indol-2-yl)methyl-idene]benzohydrazide.

Authors:  Hamid Khaledi; Siti Munirah Saharin; Hapipah Mohd Ali; Ward T Robinson; Mahmood A Abdulla
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-07-18

5.  N'-[(E)-4-Hydr-oxy-3-methoxy-benzyl-idene]benzohydrazide.

Authors:  Zahid Shafiq; Muhammad Yaqub; M Nawaz Tahir; Abid Hussain; M Saeed Iqbal
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-10-28

6.  Metal complexes with the ligand derived from 6-acetyl-1,3,7-trimethyllumazine and benzohydrazide. Molecular structures of two new Co(II) and Rh(III) complexes and analysis of in vitro antitumor activity.

Authors:  Sonia B Jiménez-Pulido; Fátima M Linares-Ordóñez; Jose M Martínez-Martos; Miguel N Moreno-Carretero; Miguel Quirós-Olozábal; María J Ramírez-Expósito
Journal:  J Inorg Biochem       Date:  2008-04-26       Impact factor: 4.155

7.  The crystal structures of copper(II), manganese(II), and nickel(II) complexes of a (Z)-2-hydroxy-N'-(2-oxoindolin-3-ylidene) benzohydrazide--potential antitumor agents.

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8.  Converse modulation of toxic alpha-synuclein oligomers in living cells by N'-benzylidene-benzohydrazide derivates and ferric iron.

Authors:  Andreas S Hillmer; Preeti Putcha; Johannes Levin; Tobias Högen; Bradley T Hyman; Hans Kretzschmar; Pamela J McLean; Armin Giese
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9.  (E)-3-Bromo-N'-(4-methoxy-benzyl-idene)benzohydrazide methanol solvate.

Authors:  Guo-Biao Cao
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-08-08

10.  N'-(Di-2-pyridylmethyl-ene)benzo-hydrazide.

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  10 in total
  9 in total

1.  (E)-N'-[(2-Hy-droxy-naphthalen-1-yl)methyl-idene]-4-methyl-benzohydrazide.

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Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-03-26

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3.  (E)-N'-(5-Bromo-2-hy-droxy-benzyl-idene)-3-meth-oxy-benzohydrazide.

Authors:  Shi-Yong Liu; Xiaoling Wang
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-06-26

4.  (E)-N'-(2-Chloro-5-nitro-benzyl-idene)-3-meth-oxy-benzohydrazide monohydrate.

Authors:  Shi-Yong Liu; Xiao-Ling Wang
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-06-11

5.  (E)-N'-[(2-Hy-droxy-1-naphthalen-1-yl)methyl-idene]-3-methyl-benzohydrazide.

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6.  (E)-N'-(2-Hy-droxy-3,5-diiodo-benzyl-idene)nicotinohydrazide acetonitrile monosolvate.

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7.  (E)-N'-(5-Bromo-2-hy-droxy-benzyl-idene)-3-methyl-benzohydrazide.

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8.  (E)-4-Methyl-N'-(3-nitro-benzyl-idene)benzohydrazide.

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  9 in total

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