Literature DB >> 21577871

2,4-Dihydr-oxy-N'-(3,4,5-trimethoxy-benzyl-idene)benzohydrazide.

Liang Xu, Shan-Shan Huang, Bao-Jing Zhang, Shou-Yu Wang, Hou-Li Zhang.   

Abstract

In the title compound, C(17)H(18)N(2)O(6), the mol-ecule is slightly twisted, with a dihedral angle of 18.1 (2)° between the two benzene rings. In the crystal structure, mol-ecules are linked into a network by inter-molecular N-H⋯O, O-H⋯N and O-H⋯O hydrogen bonds. An intra-molecular O-H⋯O hydrogen bond is also present.

Entities:  

Year:  2009        PMID: 21577871      PMCID: PMC2970187          DOI: 10.1107/S1600536809035764

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the biological properties of Schiff base compounds, see: Brückner et al. (2000 ▶); Harrop et al. (2003 ▶); Ren et al. (2002 ▶). For the crystal structures of some Schiff bases and their complexes, see: Diao (2007 ▶); Diao et al. (2007 ▶, 2008 ▶); Huang et al. (2007 ▶); Li et al. (2007 ▶).

Experimental

Crystal data

C17H18N2O6 M = 346.33 Orthorhombic, a = 14.601 (1) Å b = 11.030 (2) Å c = 20.006 (2) Å V = 3222.0 (7) Å3 Z = 8 Mo Kα radiation μ = 0.11 mm−1 T = 298 K 0.20 × 0.20 × 0.20 mm

Data collection

Bruker SMART CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2000 ▶) T min = 0.978, T max = 0.978 18590 measured reflections 3520 independent reflections 2166 reflections with I > 2σ(I) R int = 0.069

Refinement

R[F 2 > 2σ(F 2)] = 0.048 wR(F 2) = 0.148 S = 1.03 3520 reflections 234 parameters 1 restraint H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.41 e Å−3 Δρmin = −0.24 e Å−3 Data collection: SMART (Bruker, 2000 ▶); cell refinement: SAINT (Bruker, 2000 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536809035764/wn2345sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809035764/wn2345Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C17H18N2O6F(000) = 1456
Mr = 346.33Dx = 1.428 Mg m3
Orthorhombic, PbcaMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ac 2abCell parameters from 2734 reflections
a = 14.601 (1) Åθ = 2.5–26.0°
b = 11.030 (2) ŵ = 0.11 mm1
c = 20.006 (2) ÅT = 298 K
V = 3222.0 (7) Å3Block, colorless
Z = 80.20 × 0.20 × 0.20 mm
Bruker SMART CCD area-detector diffractometer3520 independent reflections
Radiation source: fine-focus sealed tube2166 reflections with I > 2σ(I)
graphiteRint = 0.069
ω scansθmax = 27.0°, θmin = 2.0°
Absorption correction: multi-scan (SADABS; Bruker, 2000)h = −18→18
Tmin = 0.978, Tmax = 0.978k = −12→14
18590 measured reflectionsl = −20→25
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.048Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.148H atoms treated by a mixture of independent and constrained refinement
S = 1.03w = 1/[σ2(Fo2) + (0.0632P)2 + 0.9796P] where P = (Fo2 + 2Fc2)/3
3520 reflections(Δ/σ)max = 0.001
234 parametersΔρmax = 0.41 e Å3
1 restraintΔρmin = −0.24 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
N1−0.07006 (12)0.46657 (17)0.36310 (9)0.0409 (5)
N20.00500 (12)0.44220 (16)0.40282 (9)0.0410 (4)
O10.01502 (10)0.60011 (16)0.30628 (8)0.0528 (5)
O2−0.04899 (12)0.72863 (18)0.21335 (9)0.0650 (5)
H2−0.01120.70570.24090.097*
O3−0.33269 (11)0.63390 (17)0.12189 (8)0.0555 (5)
H3−0.38140.60180.13220.083*
O40.12167 (11)0.13843 (16)0.63808 (9)0.0584 (5)
O50.28830 (10)0.21803 (14)0.60976 (8)0.0474 (4)
O60.31779 (11)0.37901 (16)0.51322 (9)0.0579 (5)
C1−0.21013 (15)0.4894 (2)0.25893 (12)0.0420 (5)
H1−0.21690.42510.28860.050*
C2−0.13151 (14)0.56173 (19)0.26278 (11)0.0384 (5)
C3−0.12280 (15)0.6558 (2)0.21550 (11)0.0431 (5)
C4−0.19085 (16)0.6778 (2)0.16936 (12)0.0465 (6)
H4−0.18430.74080.13880.056*
C5−0.26856 (15)0.6071 (2)0.16830 (11)0.0418 (5)
C6−0.27758 (15)0.5110 (2)0.21243 (11)0.0421 (5)
H6−0.32900.46130.21060.050*
C7−0.05838 (14)0.54391 (19)0.31173 (11)0.0396 (5)
C8−0.00724 (15)0.3683 (2)0.45107 (11)0.0423 (5)
H8−0.06520.33660.45930.051*
C90.07007 (15)0.33347 (19)0.49349 (11)0.0402 (5)
C100.15711 (15)0.3793 (2)0.48163 (11)0.0435 (5)
H100.16650.43510.44750.052*
C110.22944 (15)0.3418 (2)0.52056 (12)0.0437 (6)
C120.21532 (15)0.2592 (2)0.57258 (11)0.0411 (5)
C130.12835 (16)0.2157 (2)0.58524 (11)0.0428 (5)
C140.05539 (15)0.2521 (2)0.54515 (11)0.0428 (5)
H14−0.00310.22190.55300.051*
C150.33483 (18)0.4696 (3)0.46434 (14)0.0652 (8)
H15A0.32420.43670.42060.098*
H15B0.39730.49620.46770.098*
H15C0.29460.53710.47170.098*
C160.3270 (2)0.3053 (2)0.65403 (14)0.0655 (8)
H16A0.31950.38500.63550.098*
H16B0.39100.28870.65990.098*
H16C0.29660.30100.69650.098*
C170.03536 (19)0.0858 (3)0.65186 (14)0.0646 (8)
H17A−0.00980.14860.65600.097*
H17B0.03870.04080.69290.097*
H17C0.01860.03230.61600.097*
H1A−0.1231 (10)0.4289 (19)0.3709 (11)0.050*
U11U22U33U12U13U23
N10.0320 (10)0.0498 (11)0.0407 (11)−0.0008 (8)−0.0063 (8)0.0046 (8)
N20.0349 (10)0.0496 (10)0.0385 (11)0.0046 (8)−0.0062 (8)−0.0037 (9)
O10.0353 (9)0.0687 (11)0.0544 (11)−0.0083 (8)−0.0044 (8)0.0092 (8)
O20.0514 (11)0.0832 (13)0.0603 (12)−0.0237 (10)−0.0062 (8)0.0223 (10)
O30.0411 (9)0.0797 (12)0.0457 (10)−0.0056 (9)−0.0069 (8)0.0135 (9)
O40.0475 (10)0.0716 (11)0.0561 (11)−0.0065 (8)−0.0100 (8)0.0231 (9)
O50.0397 (9)0.0548 (9)0.0477 (10)0.0062 (7)−0.0115 (7)−0.0020 (8)
O60.0359 (9)0.0830 (12)0.0548 (11)−0.0034 (8)−0.0009 (8)0.0142 (9)
C10.0383 (12)0.0432 (12)0.0445 (13)−0.0004 (9)0.0003 (10)0.0051 (10)
C20.0321 (11)0.0461 (12)0.0371 (12)0.0001 (9)0.0016 (9)0.0015 (10)
C30.0340 (12)0.0543 (13)0.0411 (13)−0.0075 (10)0.0014 (10)0.0021 (11)
C40.0445 (14)0.0559 (14)0.0391 (13)−0.0046 (11)0.0008 (10)0.0104 (11)
C50.0347 (12)0.0586 (14)0.0320 (12)0.0022 (10)−0.0010 (9)−0.0001 (10)
C60.0349 (12)0.0469 (12)0.0444 (13)−0.0044 (10)−0.0017 (10)0.0005 (11)
C70.0305 (11)0.0465 (12)0.0417 (13)−0.0004 (9)0.0013 (9)−0.0037 (10)
C80.0350 (12)0.0497 (13)0.0423 (13)−0.0002 (10)−0.0053 (10)−0.0020 (11)
C90.0368 (12)0.0463 (12)0.0374 (13)0.0027 (9)−0.0051 (10)−0.0036 (10)
C100.0419 (13)0.0529 (13)0.0356 (12)0.0032 (10)−0.0025 (10)0.0037 (10)
C110.0326 (12)0.0558 (14)0.0427 (13)0.0010 (10)0.0004 (10)−0.0020 (11)
C120.0354 (12)0.0479 (12)0.0399 (13)0.0062 (10)−0.0062 (10)−0.0028 (10)
C130.0437 (13)0.0464 (12)0.0382 (13)0.0023 (10)−0.0032 (10)0.0016 (10)
C140.0338 (12)0.0519 (13)0.0428 (13)−0.0014 (10)−0.0033 (10)−0.0012 (11)
C150.0477 (16)0.0815 (19)0.0664 (18)−0.0079 (13)0.0057 (14)0.0125 (15)
C160.0667 (18)0.0671 (17)0.0629 (18)0.0099 (14)−0.0232 (15)−0.0177 (14)
C170.0556 (16)0.0703 (17)0.0678 (18)−0.0114 (14)−0.0058 (14)0.0237 (14)
N1—C71.346 (3)C4—H40.9300
N1—N21.380 (2)C5—C61.386 (3)
N1—H1A0.893 (10)C6—H60.9300
N2—C81.276 (3)C8—C91.464 (3)
O1—C71.243 (2)C8—H80.9300
O2—C31.345 (3)C9—C141.385 (3)
O2—H20.8200C9—C101.388 (3)
O3—C51.351 (3)C10—C111.376 (3)
O3—H30.8200C10—H100.9300
O4—C131.362 (3)C11—C121.399 (3)
O4—C171.415 (3)C12—C131.381 (3)
O5—C121.376 (2)C13—C141.393 (3)
O5—C161.425 (3)C14—H140.9300
O6—C111.362 (3)C15—H15A0.9600
O6—C151.420 (3)C15—H15B0.9600
C1—C61.375 (3)C15—H15C0.9600
C1—C21.400 (3)C16—H16A0.9600
C1—H10.9300C16—H16B0.9600
C2—C31.410 (3)C16—H16C0.9600
C2—C71.462 (3)C17—H17A0.9600
C3—C41.378 (3)C17—H17B0.9600
C4—C51.377 (3)C17—H17C0.9600
C7—N1—N2117.54 (17)C10—C9—C8120.8 (2)
C7—N1—H1A122.6 (15)C11—C10—C9119.8 (2)
N2—N1—H1A119.8 (15)C11—C10—H10120.1
C8—N2—N1116.67 (18)C9—C10—H10120.1
C3—O2—H2109.5O6—C11—C10125.2 (2)
C5—O3—H3109.5O6—C11—C12114.60 (19)
C13—O4—C17118.17 (18)C10—C11—C12120.2 (2)
C12—O5—C16114.84 (18)O5—C12—C13119.9 (2)
C11—O6—C15116.89 (19)O5—C12—C11120.2 (2)
C6—C1—C2121.7 (2)C13—C12—C11119.9 (2)
C6—C1—H1119.1O4—C13—C12115.19 (19)
C2—C1—H1119.1O4—C13—C14124.9 (2)
C1—C2—C3117.1 (2)C12—C13—C14119.9 (2)
C1—C2—C7124.0 (2)C9—C14—C13119.9 (2)
C3—C2—C7118.85 (19)C9—C14—H14120.1
O2—C3—C4116.8 (2)C13—C14—H14120.1
O2—C3—C2122.2 (2)O6—C15—H15A109.5
C4—C3—C2121.0 (2)O6—C15—H15B109.5
C5—C4—C3120.3 (2)H15A—C15—H15B109.5
C5—C4—H4119.8O6—C15—H15C109.5
C3—C4—H4119.8H15A—C15—H15C109.5
O3—C5—C4117.2 (2)H15B—C15—H15C109.5
O3—C5—C6122.6 (2)O5—C16—H16A109.5
C4—C5—C6120.1 (2)O5—C16—H16B109.5
C1—C6—C5119.7 (2)H16A—C16—H16B109.5
C1—C6—H6120.2O5—C16—H16C109.5
C5—C6—H6120.2H16A—C16—H16C109.5
O1—C7—N1119.5 (2)H16B—C16—H16C109.5
O1—C7—C2120.3 (2)O4—C17—H17A109.5
N1—C7—C2120.25 (19)O4—C17—H17B109.5
N2—C8—C9119.9 (2)H17A—C17—H17B109.5
N2—C8—H8120.1O4—C17—H17C109.5
C9—C8—H8120.1H17A—C17—H17C109.5
C14—C9—C10120.3 (2)H17B—C17—H17C109.5
C14—C9—C8118.9 (2)
D—H···AD—HH···AD···AD—H···A
N1—H1A···O5i0.89 (1)2.11 (1)2.953 (2)157 (2)
O3—H3···N2ii0.822.523.214 (3)143
O3—H3···O1ii0.821.952.674 (2)147
O2—H2···O10.821.792.518 (2)147
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N1—H1A⋯O5i0.893 (10)2.109 (13)2.953 (2)157 (2)
O3—H3⋯N2ii0.822.523.214 (3)143
O3—H3⋯O1ii0.821.952.674 (2)147
O2—H2⋯O10.821.792.518 (2)147

Symmetry codes: (i) ; (ii) .

  5 in total

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Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

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Authors:  C Brückner; S J Rettig; D Dolphin
Journal:  Inorg Chem       Date:  2000-12-25       Impact factor: 5.165

3.  Synthesis, biological evaluation, and quantitative structure-activity relationship analysis of new Schiff bases of hydroxysemicarbazide as potential antitumor agents.

Authors:  Shijun Ren; Rubin Wang; Kenichi Komatsu; Patricia Bonaz-Krause; Yegor Zyrianov; Charles E McKenna; Csaba Csipke; Zoltan A Tokes; Eric J Lien
Journal:  J Med Chem       Date:  2002-01-17       Impact factor: 7.446

4.  Dioxygen activation by a dinuclear nickel thiolate complex: structural characterization of the ligand oxidized product.

Authors:  Todd C Harrop; Marilyn M Olmstead; Pradip K Mascharak
Journal:  Chem Commun (Camb)       Date:  2003-02-07       Impact factor: 6.222

5.  3,5-Dihydr-oxy-N'-[(2-hydr-oxy-1-naph-thyl)methyl-ene]benzohydrazide.

Authors:  Yun-Peng Diao; Yu-Hong Zhen; Xu Han; Sa Deng
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2007-12-06
  5 in total
  10 in total

1.  (E)-N'-(5-Bromo-2-hy-droxy-benzyl-idene)-2-meth-oxy-benzohydrazide.

Authors:  Shi-Yong Liu; Zhonglu You
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-06-16

2.  (E)-N'-[4-(Dimethyl-amino)-benzyl-idene]-2-meth-oxy-benzohydrazide.

Authors:  Shi-Yong Liu; Xiaoling Wang
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-06-26

3.  (E)-N'-(5-Bromo-2-hy-droxy-benzyl-idene)-4-hy-droxy-3-meth-oxy-benzohydrazide methanol solvate.

Authors:  Shi-Yong Liu; Zhonglu You
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-06-16

4.  (E)-N'-(5-Bromo-2-hy-droxy-benzyl-idene)-3-meth-oxy-benzohydrazide.

Authors:  Shi-Yong Liu; Xiaoling Wang
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-06-26

5.  (E)-N'-[(2-Hydroxynaphthalen-1-yl)methylidene]nicotinohydrazide.

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Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-06-22

6.  (E)-N'-[(2-Hy-droxy-1-naphthalen-1-yl)methyl-idene]-3-methyl-benzohydrazide.

Authors:  Shi-Yong Liu; Shan-Shan Sun; Ting-Ting Zheng; Xiang-Lei Zheng; Xiao-Feng Zhao; Xiao-Fang Li
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-03-26

7.  (E)-N'-(4-Hy-droxy-benzyl-idene)-2-nitro-benzohydrazide.

Authors:  Shi-Yong Liu; Zhonglu You
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-06-16

8.  (E)-N'-(5-Bromo-2-hy-droxy-benzyl-idene)-3-methyl-benzohydrazide.

Authors:  Hai-Chang Guo; Shi-Yong Liu; Xiao-Ling Wang
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Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-05-05

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Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-05-05
  10 in total

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