Literature DB >> 21583333

Tetra-aqua-(5,5'-dimethyl-2,2'-bipyridine-κN,N')zinc(II) sulfate.

Qing-Lan Zhao, Hui-Feng Bai.   

Abstract

The asymmetric unit of the title compound, [Zn(C(12)H(12)N(2))(H(2)O)(4)]SO(4), consists of a Zn(II) complex cation, a sulfate anion and four mol-ecules of water coordinated to the Zn(II) atom. The Zn(II) complex cation, with approximate twofold symmetry, displays a slightly distorted octa-hedral geometry around the Zn(II) atom, which is coordinated by two N atoms from a 5,5'-dimethyl-2,2'-bipyridine ligand and by the O atoms of four water mol-ecules. In the crystal, O-H⋯O hydrogen bonds help to establish the packing.

Entities:  

Year:  2009        PMID: 21583333      PMCID: PMC2977444          DOI: 10.1107/S160053680902488X

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related structures, see: Schubert, Eschbaumer et al. (1999 ▶); Schubert, Hochwimmer et al. (1999 ▶); Shi et al. (2009 ▶); Zhang et al. (2009 ▶); Momeni et al. (2009 ▶); Kim et al. (2009 ▶); Yang et al. (2001 ▶).

Experimental

Crystal data

[Zn(C12H12N2)(H2O)4]SO4 M = 417.73 Monoclinic, a = 9.5648 (17) Å b = 9.6050 (17) Å c = 18.477 (3) Å β = 102.453 (4)° V = 1657.5 (5) Å3 Z = 4 Mo Kα radiation μ = 1.65 mm−1 T = 296 K 0.30 × 0.26 × 0.25 mm

Data collection

Bruker SMART APEXII CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2005 ▶) T min = 0.637, T max = 0.683 9462 measured reflections 3263 independent reflections 2648 reflections with I > 2σ(I) R int = 0.085

Refinement

R[F 2 > 2σ(F 2)] = 0.037 wR(F 2) = 0.091 S = 1.04 3263 reflections 219 parameters H-atom parameters constrained Δρmax = 0.52 e Å−3 Δρmin = −0.40 e Å−3 Data collection: APEX2 (Bruker, 2005 ▶); cell refinement: SAINT (Bruker, 2005 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks I, global. DOI: 10.1107/S160053680902488X/pv2173sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S160053680902488X/pv2173Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Zn(C12H12N2)(H2O)4]SO4F(000) = 864
Mr = 417.73Dx = 1.674 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 4417 reflections
a = 9.5648 (17) Åθ = 2.2–27.9°
b = 9.6050 (17) ŵ = 1.65 mm1
c = 18.477 (3) ÅT = 296 K
β = 102.453 (4)°Block, colourless
V = 1657.5 (5) Å30.30 × 0.26 × 0.25 mm
Z = 4
Bruker SMART APEXII CCD area-detector diffractometer3263 independent reflections
Radiation source: fine-focus sealed tube2648 reflections with I > 2σ(I)
graphiteRint = 0.085
φ and ω scansθmax = 26.0°, θmin = 2.2°
Absorption correction: multi-scan (SADABS; Bruker, 2005)h = −11→11
Tmin = 0.637, Tmax = 0.683k = −11→10
9462 measured reflectionsl = −22→13
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.037Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.091H-atom parameters constrained
S = 1.04w = 1/[σ2(Fo2) + (0.041P)2] where P = (Fo2 + 2Fc2)/3
3263 reflections(Δ/σ)max = 0.001
219 parametersΔρmax = 0.52 e Å3
0 restraintsΔρmin = −0.39 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Zn10.27251 (3)0.86942 (3)0.804800 (16)0.02610 (12)
S10.74896 (6)0.86596 (7)0.74789 (4)0.02499 (17)
N10.4185 (2)0.7784 (2)0.89612 (12)0.0321 (5)
N20.2216 (2)0.9768 (2)0.89671 (12)0.0324 (5)
O1W0.1234 (2)0.7150 (2)0.80803 (15)0.0632 (7)
H1WA0.14000.62810.81250.076*
H1WB0.03360.72680.80180.076*
O2W0.12257 (18)0.9747 (2)0.72531 (10)0.0378 (5)
H2WA0.03290.96060.71300.045*
H2WB0.13811.05860.71460.045*
O3W0.33946 (19)0.7568 (2)0.72175 (10)0.0347 (5)
H3WA0.42030.77430.71180.042*
H3WB0.32640.66930.71820.042*
O4W0.4183 (2)1.0182 (2)0.78745 (13)0.0486 (6)
H4WA0.50661.00520.78840.058*
H4WB0.40491.10530.79010.058*
O50.70202 (19)0.9743 (2)0.79426 (10)0.0335 (4)
O60.62104 (18)0.7951 (2)0.70442 (10)0.0343 (4)
O70.83003 (19)0.9308 (2)0.69779 (11)0.0359 (5)
O80.83933 (19)0.7631 (2)0.79580 (10)0.0358 (5)
C10.5164 (3)0.6810 (3)0.89163 (17)0.0369 (7)
H1A0.52330.64980.84490.044*
C20.6085 (3)0.6240 (3)0.95322 (17)0.0379 (7)
C30.7185 (3)0.5184 (4)0.9430 (2)0.0527 (9)
H3A0.67730.45590.90360.079*
H3B0.74940.46670.98810.079*
H3C0.79910.56520.93080.079*
C40.5934 (3)0.6713 (3)1.02187 (17)0.0409 (7)
H4A0.65110.63511.06480.049*
C50.4932 (3)0.7720 (3)1.02696 (15)0.0393 (7)
H50.48430.80431.07320.047*
C60.4054 (3)0.8254 (3)0.96315 (15)0.0311 (6)
C70.2972 (3)0.9349 (3)0.96385 (15)0.0303 (6)
C80.2708 (3)0.9936 (3)1.02828 (16)0.0399 (7)
H80.32140.96341.07430.048*
C90.1693 (3)1.0966 (3)1.02349 (18)0.0419 (7)
H90.15171.13601.06660.050*
C100.0931 (3)1.1423 (3)0.95547 (18)0.0384 (7)
C11−0.0155 (4)1.2571 (4)0.9464 (2)0.0544 (9)
H11A−0.05021.26650.99110.082*
H11B−0.09381.23530.90600.082*
H11C0.02811.34280.93620.082*
C120.1239 (3)1.0770 (3)0.89353 (17)0.0371 (7)
H120.07321.10480.84700.045*
U11U22U33U12U13U23
Zn10.01825 (17)0.02401 (18)0.0354 (2)0.00040 (12)0.00430 (11)−0.00115 (13)
S10.0161 (3)0.0206 (3)0.0387 (4)0.0001 (2)0.0068 (2)−0.0004 (3)
N10.0287 (12)0.0324 (12)0.0335 (13)0.0039 (10)0.0029 (9)0.0026 (11)
N20.0292 (12)0.0330 (12)0.0359 (14)0.0003 (10)0.0089 (10)−0.0031 (11)
O1W0.0231 (11)0.0266 (12)0.143 (2)−0.0025 (10)0.0252 (12)−0.0011 (13)
O2W0.0200 (9)0.0340 (11)0.0553 (13)0.0050 (8)−0.0006 (8)0.0072 (10)
O3W0.0266 (10)0.0263 (10)0.0534 (12)0.0023 (8)0.0134 (8)−0.0075 (9)
O4W0.0229 (10)0.0246 (10)0.1025 (18)−0.0007 (9)0.0230 (10)0.0024 (11)
O50.0294 (10)0.0277 (10)0.0452 (12)0.0053 (8)0.0116 (8)−0.0061 (9)
O60.0203 (9)0.0336 (11)0.0478 (12)−0.0079 (8)0.0050 (8)−0.0051 (9)
O70.0282 (10)0.0343 (11)0.0480 (12)−0.0060 (9)0.0148 (8)0.0016 (9)
O80.0270 (10)0.0270 (10)0.0522 (13)0.0076 (8)0.0058 (8)0.0053 (9)
C10.0317 (15)0.0394 (16)0.0392 (17)0.0061 (13)0.0064 (12)−0.0003 (14)
C20.0318 (15)0.0325 (16)0.0469 (19)−0.0001 (13)0.0033 (12)0.0034 (14)
C30.0392 (18)0.052 (2)0.064 (2)0.0148 (16)0.0058 (14)0.0063 (18)
C40.0316 (16)0.0439 (17)0.0438 (19)0.0053 (14)0.0006 (12)0.0127 (15)
C50.0425 (17)0.0427 (17)0.0320 (17)−0.0004 (15)0.0062 (12)0.0031 (14)
C60.0264 (14)0.0307 (14)0.0361 (16)−0.0012 (12)0.0065 (11)0.0012 (13)
C70.0261 (14)0.0304 (14)0.0340 (16)−0.0036 (12)0.0057 (11)−0.0008 (12)
C80.0412 (17)0.0450 (18)0.0337 (18)0.0020 (15)0.0083 (13)−0.0008 (14)
C90.0440 (18)0.0430 (17)0.0437 (19)−0.0030 (15)0.0205 (14)−0.0076 (15)
C100.0296 (15)0.0363 (16)0.0520 (19)0.0004 (13)0.0149 (13)−0.0077 (14)
C110.049 (2)0.049 (2)0.068 (2)0.0133 (17)0.0188 (16)−0.0089 (17)
C120.0306 (15)0.0380 (16)0.0417 (17)0.0036 (13)0.0053 (12)0.0017 (14)
Zn1—O1W2.068 (2)C1—H1A0.9300
Zn1—O4W2.0693 (19)C2—C41.384 (4)
Zn1—O2W2.0806 (18)C2—C31.502 (4)
Zn1—O3W2.0880 (17)C3—H3A0.9600
Zn1—N22.131 (2)C3—H3B0.9600
Zn1—N12.132 (2)C3—H3C0.9600
S1—O71.4682 (19)C4—C51.379 (4)
S1—O81.4756 (19)C4—H4A0.9300
S1—O61.4772 (19)C5—C61.389 (4)
S1—O51.4779 (19)C5—H50.9300
N1—C11.339 (3)C6—C71.477 (4)
N1—C61.349 (3)C7—C81.388 (4)
N2—C121.334 (4)C8—C91.376 (4)
N2—C71.355 (3)C8—H80.9300
O1W—H1WA0.8496C9—C101.381 (4)
O1W—H1WB0.8495C9—H90.9300
O2W—H2WA0.8497C10—C121.392 (4)
O2W—H2WB0.8497C10—C111.499 (4)
O3W—H3WA0.8497C11—H11A0.9600
O3W—H3WB0.8498C11—H11B0.9600
O4W—H4WA0.8498C11—H11C0.9600
O4W—H4WB0.8499C12—H120.9300
C1—C21.392 (4)
O1W—Zn1—O4W172.74 (10)C2—C1—H1A118.3
O1W—Zn1—O2W89.68 (9)C4—C2—C1116.5 (3)
O4W—Zn1—O2W86.56 (8)C4—C2—C3123.5 (3)
O1W—Zn1—O3W88.40 (9)C1—C2—C3120.0 (3)
O4W—Zn1—O3W85.42 (8)C2—C3—H3A109.5
O2W—Zn1—O3W90.41 (8)C2—C3—H3B109.5
O1W—Zn1—N292.68 (9)H3A—C3—H3B109.5
O4W—Zn1—N293.82 (9)C2—C3—H3C109.5
O2W—Zn1—N294.95 (8)H3A—C3—H3C109.5
O3W—Zn1—N2174.54 (8)H3B—C3—H3C109.5
O1W—Zn1—N191.22 (10)C5—C4—C2120.3 (3)
O4W—Zn1—N193.29 (9)C5—C4—H4A119.9
O2W—Zn1—N1172.85 (8)C2—C4—H4A119.9
O3W—Zn1—N196.70 (8)C4—C5—C6120.2 (3)
N2—Zn1—N177.93 (9)C4—C5—H5119.9
O7—S1—O8109.97 (11)C6—C5—H5119.9
O7—S1—O6109.92 (12)N1—C6—C5119.8 (3)
O8—S1—O6109.07 (11)N1—C6—C7116.8 (2)
O7—S1—O5109.56 (11)C5—C6—C7123.5 (3)
O8—S1—O5109.62 (11)N2—C7—C8120.3 (3)
O6—S1—O5108.68 (11)N2—C7—C6116.1 (2)
C1—N1—C6119.7 (2)C8—C7—C6123.6 (3)
C1—N1—Zn1125.80 (19)C9—C8—C7119.5 (3)
C6—N1—Zn1114.48 (17)C9—C8—H8120.2
C12—N2—C7119.0 (2)C7—C8—H8120.2
C12—N2—Zn1126.3 (2)C8—C9—C10120.9 (3)
C7—N2—Zn1114.67 (18)C8—C9—H9119.5
Zn1—O1W—H1WA126.3C10—C9—H9119.5
Zn1—O1W—H1WB125.8C9—C10—C12116.2 (3)
H1WA—O1W—H1WB107.8C9—C10—C11123.6 (3)
Zn1—O2W—H2WA127.8C12—C10—C11120.3 (3)
Zn1—O2W—H2WB119.8C10—C11—H11A109.5
H2WA—O2W—H2WB107.8C10—C11—H11B109.5
Zn1—O3W—H3WA119.6H11A—C11—H11B109.5
Zn1—O3W—H3WB120.4C10—C11—H11C109.5
H3WA—O3W—H3WB107.8H11A—C11—H11C109.5
Zn1—O4W—H4WA126.5H11B—C11—H11C109.5
Zn1—O4W—H4WB123.8N2—C12—C10124.0 (3)
H4WA—O4W—H4WB107.7N2—C12—H12118.0
N1—C1—C2123.5 (3)C10—C12—H12118.0
N1—C1—H1A118.3
O1W—Zn1—N1—C188.9 (2)C1—N1—C6—C5−0.2 (4)
O4W—Zn1—N1—C1−85.4 (2)Zn1—N1—C6—C5178.9 (2)
O3W—Zn1—N1—C10.3 (2)C1—N1—C6—C7178.8 (2)
N2—Zn1—N1—C1−178.6 (2)Zn1—N1—C6—C7−2.1 (3)
O1W—Zn1—N1—C6−90.20 (19)C4—C5—C6—N1−0.1 (4)
O4W—Zn1—N1—C695.50 (19)C4—C5—C6—C7−178.9 (3)
O3W—Zn1—N1—C6−178.73 (18)C12—N2—C7—C81.4 (4)
N2—Zn1—N1—C62.29 (18)Zn1—N2—C7—C8−177.9 (2)
O1W—Zn1—N2—C12−90.7 (2)C12—N2—C7—C6−179.0 (2)
O4W—Zn1—N2—C1286.1 (2)Zn1—N2—C7—C61.8 (3)
O2W—Zn1—N2—C12−0.8 (2)N1—C6—C7—N20.2 (4)
N1—Zn1—N2—C12178.6 (2)C5—C6—C7—N2179.1 (2)
O1W—Zn1—N2—C788.50 (19)N1—C6—C7—C8179.9 (3)
O4W—Zn1—N2—C7−94.72 (19)C5—C6—C7—C8−1.2 (4)
O2W—Zn1—N2—C7178.41 (18)N2—C7—C8—C9−1.3 (4)
N1—Zn1—N2—C7−2.17 (18)C6—C7—C8—C9179.1 (3)
C6—N1—C1—C2−0.4 (4)C7—C8—C9—C100.1 (4)
Zn1—N1—C1—C2−179.4 (2)C8—C9—C10—C120.9 (4)
N1—C1—C2—C41.1 (4)C8—C9—C10—C11−178.0 (3)
N1—C1—C2—C3−178.0 (3)C7—N2—C12—C10−0.3 (4)
C1—C2—C4—C5−1.3 (4)Zn1—N2—C12—C10178.9 (2)
C3—C2—C4—C5177.8 (3)C9—C10—C12—N2−0.9 (4)
C2—C4—C5—C60.8 (4)C11—C10—C12—N2178.1 (3)
D—H···AD—HH···AD···AD—H···A
O4W—H4WB···S1i0.852.913.701 (2)155
O4W—H4WB···O6i0.851.842.695 (3)179
O4W—H4WA···S10.852.913.697 (2)155
O4W—H4WA···O50.851.872.722 (3)178
O3W—H3WB···O5ii0.851.902.748 (3)178
O3W—H3WA···O60.851.962.804 (3)170
O2W—H2WB···O8i0.851.992.831 (3)170
O2W—H2WA···O7iii0.851.922.766 (3)173
O1W—H1WB···S1iii0.853.003.801 (2)157
O1W—H1WB···O8iii0.851.872.717 (3)175
O1W—H1WA···O7ii0.851.932.772 (3)169
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O4W—H4WB⋯O6i0.851.842.695 (3)179
O4W—H4WA⋯O50.851.872.722 (3)178
O3W—H3WB⋯O5ii0.851.902.748 (3)178
O3W—H3WA⋯O60.851.962.804 (3)170
O2W—H2WB⋯O8i0.851.992.831 (3)170
O2W—H2WA⋯O7iii0.851.922.766 (3)173
O1W—H1WB⋯O8iii0.851.872.717 (3)175
O1W—H1WA⋯O7ii0.851.932.772 (3)169

Symmetry codes: (i) ; (ii) ; (iii) .

  5 in total

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Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

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Authors:  Wen-Juan Shi
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-05-20

3.  Aqua-azido-{2,2'-[o-phenylenebis(nitrilo-methyl-idyne)]diphenolato}manganese(III) hemihydrate.

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Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-06-06

4.  Tetra-chlorido-(1,10-phenanthroline-κN,N')tin(IV) 1,2-dichloro-ethane hemisolvate.

Authors:  Badri Z Momeni; Frank Rominger; Simin S Hosseini
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-05-29

5.  Redetermination of (2,2'-bipyridine-κN,N')dichlorido-palladium(II) dichloro-methane solvate.

Authors:  Nam-Ho Kim; In-Chul Hwang; Kwang Ha
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-05-07
  5 in total
  3 in total

1.  Aqua-bis(benzoato-κO)(5,5'-dimethyl-2,2'-bipyridine-κN,N')copper(II).

Authors:  Xi-Yan Dong; Xiaojie Xu; Lei Yang
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-10-03

2.  catena-Poly[[aqua-(5,5'-dimethyl-2,2'-bipyridine-κN,N')copper(II)]-μ-2,2'-oxydibenzoato-κO:O'].

Authors:  Chong-Zhen Mei; Han-Lin Xiong; Peng Zhang
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-07-10

3.  Crystal structure of tetra-aqua-(5,5'-dimethyl-2,2'-bipyridyl-κ(2) N,N')iron(II) sulfate.

Authors:  Yamine Belamri; Fatima Setifi; Bojana M Francuski; Sladjana B Novaković; Setifi Zouaoui
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  3 in total

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