Literature DB >> 21581036

(E)-N'-(2-Chloro-5-nitro-benzyl-idene)-4-methoxy-benzohydrazide.

Hong-Yan Ban, Cong-Ming Li.   

Abstract

In the title compound, C(15)H(12)ClN(3)O(4), the benzohydrazide group is not planar and the mol-ecule exists in a trans configuration with respect to the methyl-idene unit. The dihedral angle between the two substituted benzene rings is 0.4 (3)°. In the crystal structure, mol-ecules are linked by inter-molecular N-H⋯O hydrogen bonds, forming chains parallel to the c axis.

Entities:  

Year:  2008        PMID: 21581036      PMCID: PMC2959696          DOI: 10.1107/S1600536808034107

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the biological activity of hydrazones, see: Zhong et al. (2007 ▶); Raj et al. (2007 ▶); Jimenez-Pulido et al. (2008 ▶). For related structures, see: Yehye et al. (2008 ▶); Fun, Patil, Jebas et al. (2008 ▶); Yang et al. (2008 ▶); Ejsmont et al. (2008 ▶); Fun, Patil, Rao et al. (2008 ▶). For reference bond lengths, see: Allen et al. (1987 ▶).

Experimental

Crystal data

C15H12ClN3O4 M = 333.73 Monoclinic, a = 11.724 (2) Å b = 13.482 (3) Å c = 9.4259 (19) Å β = 97.199 (3)° V = 1478.1 (5) Å3 Z = 4 Mo Kα radiation μ = 0.28 mm−1 T = 298 (2) K 0.20 × 0.20 × 0.17 mm

Data collection

Bruker SMART CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.946, T max = 0.953 4284 measured reflections 2735 independent reflections 2320 reflections with I > 2σ(I) R int = 0.015

Refinement

R[F 2 > 2σ(F 2)] = 0.035 wR(F 2) = 0.089 S = 1.04 2735 reflections 212 parameters 3 restraints H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.14 e Å−3 Δρmin = −0.19 e Å−3 Absolute structure: Flack (1983 ▶), 1079 Friedel pairs Flack parameter: −0.01 (7) Data collection: SMART (Bruker, 1998 ▶); cell refinement: SAINT (Bruker, 1998 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536808034107/rz2255sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536808034107/rz2255Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C15H12ClN3O4F(000) = 688
Mr = 333.73Dx = 1.500 Mg m3
Monoclinic, CcMo Kα radiation, λ = 0.71073 Å
Hall symbol: C -2ycCell parameters from 1899 reflections
a = 11.724 (2) Åθ = 2.7–26.0°
b = 13.482 (3) ŵ = 0.28 mm1
c = 9.4259 (19) ÅT = 298 K
β = 97.199 (3)°Block, colourless
V = 1478.1 (5) Å30.20 × 0.20 × 0.17 mm
Z = 4
Bruker SMART CCD area-detector diffractometer2735 independent reflections
Radiation source: fine-focus sealed tube2320 reflections with I > 2σ(I)
graphiteRint = 0.015
ω scansθmax = 27.5°, θmin = 2.3°
Absorption correction: multi-scan (SADABS; Sheldrick, 1996)h = −12→15
Tmin = 0.946, Tmax = 0.953k = −17→14
4284 measured reflectionsl = −12→11
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.035H atoms treated by a mixture of independent and constrained refinement
wR(F2) = 0.090w = 1/[σ2(Fo2) + (0.0432P)2 + 0.2836P] where P = (Fo2 + 2Fc2)/3
S = 1.04(Δ/σ)max < 0.001
2735 reflectionsΔρmax = 0.14 e Å3
212 parametersΔρmin = −0.19 e Å3
3 restraintsAbsolute structure: Flack (1983), 1079 Friedel pairs
Primary atom site location: structure-invariant direct methodsFlack parameter: −0.01 (7)
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Cl10.12621 (9)0.12406 (5)0.37773 (10)0.0861 (3)
N10.13488 (17)0.41377 (14)0.18463 (19)0.0474 (5)
N20.09570 (18)0.49328 (13)0.2558 (2)0.0477 (4)
N30.3330 (2)0.2029 (2)−0.1503 (3)0.0806 (8)
O10.07475 (18)0.58146 (13)0.05053 (18)0.0603 (5)
O2−0.0721 (2)0.92744 (16)0.4294 (3)0.0838 (7)
O30.3489 (3)0.2876 (2)−0.1823 (3)0.1312 (12)
O40.3571 (2)0.1320 (2)−0.2230 (3)0.1006 (8)
C10.1933 (2)0.24746 (17)0.1773 (2)0.0466 (5)
C20.1870 (2)0.15042 (18)0.2246 (3)0.0521 (6)
C30.2269 (2)0.07102 (18)0.1509 (3)0.0625 (7)
H30.22110.00670.18480.075*
C40.2750 (2)0.0880 (2)0.0280 (3)0.0626 (7)
H40.30190.0356−0.02270.075*
C50.2829 (2)0.1836 (2)−0.0190 (3)0.0574 (7)
C60.2439 (2)0.26332 (17)0.0522 (3)0.0506 (6)
H60.25110.32730.01760.061*
C70.1489 (2)0.33260 (16)0.2508 (2)0.0478 (5)
H70.13150.32670.34400.057*
C80.06846 (19)0.57703 (16)0.1789 (2)0.0437 (5)
C90.0312 (2)0.66442 (16)0.2574 (2)0.0432 (5)
C10−0.0184 (2)0.66089 (17)0.3825 (2)0.0466 (5)
H10−0.02770.60010.42620.056*
C11−0.0548 (2)0.7478 (2)0.4443 (3)0.0536 (6)
H11−0.08900.74490.52800.064*
C12−0.0394 (2)0.83779 (18)0.3803 (3)0.0594 (7)
C130.0120 (3)0.8419 (2)0.2577 (3)0.0664 (7)
H130.02430.90310.21660.080*
C140.0454 (2)0.75687 (18)0.1949 (3)0.0576 (7)
H140.07780.76070.10990.069*
C15−0.1293 (3)0.9299 (3)0.5519 (5)0.0924 (11)
H15A−0.19780.89040.53590.139*
H15B−0.14930.99720.57140.139*
H15C−0.07960.90390.63200.139*
H20.085 (2)0.490 (2)0.3482 (13)0.080*
U11U22U33U12U13U23
Cl10.1402 (7)0.0565 (4)0.0680 (4)0.0130 (5)0.0377 (4)0.0108 (4)
N10.0625 (12)0.0416 (10)0.0391 (10)0.0010 (8)0.0102 (9)−0.0058 (8)
N20.0704 (12)0.0389 (9)0.0353 (9)0.0033 (8)0.0128 (9)−0.0020 (7)
N30.0738 (16)0.094 (2)0.0798 (18)−0.0181 (14)0.0314 (13)−0.0263 (16)
O10.0928 (13)0.0558 (9)0.0343 (9)0.0018 (9)0.0157 (8)0.0020 (7)
O20.0947 (15)0.0526 (12)0.1063 (18)0.0148 (10)0.0216 (13)−0.0121 (11)
O30.187 (3)0.098 (2)0.131 (2)−0.042 (2)0.109 (2)−0.0274 (17)
O40.1071 (17)0.1107 (19)0.0928 (16)−0.0112 (14)0.0478 (14)−0.0467 (14)
C10.0483 (12)0.0468 (12)0.0440 (13)−0.0013 (10)0.0028 (10)−0.0074 (10)
C20.0607 (15)0.0487 (12)0.0455 (13)0.0046 (11)0.0015 (11)−0.0052 (10)
C30.0749 (17)0.0441 (13)0.0663 (18)0.0083 (12)0.0008 (14)−0.0078 (12)
C40.0590 (15)0.0581 (15)0.0696 (18)0.0076 (12)0.0029 (13)−0.0235 (13)
C50.0464 (14)0.0688 (17)0.0574 (15)−0.0061 (11)0.0080 (12)−0.0217 (13)
C60.0500 (13)0.0504 (13)0.0517 (14)−0.0037 (12)0.0071 (11)−0.0082 (11)
C70.0631 (14)0.0425 (12)0.0379 (12)−0.0009 (11)0.0067 (10)−0.0031 (9)
C80.0553 (13)0.0426 (11)0.0339 (11)−0.0066 (10)0.0085 (9)0.0000 (9)
C90.0510 (13)0.0428 (11)0.0352 (11)0.0004 (10)0.0028 (10)−0.0001 (9)
C100.0563 (14)0.0431 (12)0.0399 (12)−0.0016 (10)0.0046 (11)0.0018 (10)
C110.0512 (13)0.0615 (16)0.0481 (15)0.0030 (12)0.0064 (12)−0.0111 (11)
C120.0589 (15)0.0406 (13)0.0752 (19)0.0073 (11)−0.0051 (14)−0.0043 (12)
C130.0841 (19)0.0430 (13)0.0721 (18)0.0036 (13)0.0099 (15)0.0094 (13)
C140.0753 (17)0.0485 (14)0.0507 (14)−0.0021 (12)0.0144 (13)0.0100 (11)
C150.077 (2)0.081 (2)0.121 (3)0.0114 (16)0.017 (2)−0.038 (2)
Cl1—C21.725 (3)C4—H40.9300
N1—C71.260 (3)C5—C61.376 (3)
N1—N21.374 (2)C6—H60.9300
N2—C81.358 (3)C7—H70.9300
N2—H20.897 (10)C8—C91.485 (3)
N3—O31.202 (4)C9—C101.379 (3)
N3—O41.229 (3)C9—C141.397 (3)
N3—C51.458 (4)C10—C111.399 (3)
O1—C81.223 (3)C10—H100.9300
O2—C121.366 (3)C11—C121.376 (4)
O2—C151.406 (4)C11—H110.9300
C1—C21.387 (3)C12—C131.370 (4)
C1—C61.402 (3)C13—C141.370 (4)
C1—C71.469 (3)C13—H130.9300
C2—C31.389 (3)C14—H140.9300
C3—C41.370 (4)C15—H15A0.9600
C3—H30.9300C15—H15B0.9600
C4—C51.369 (4)C15—H15C0.9600
C7—N1—N2117.83 (18)C1—C7—H7120.8
C8—N2—N1117.34 (17)O1—C8—N2121.9 (2)
C8—N2—H2120.9 (19)O1—C8—C9120.8 (2)
N1—N2—H2121.7 (19)N2—C8—C9117.29 (18)
O3—N3—O4123.0 (3)C10—C9—C14118.4 (2)
O3—N3—C5118.3 (3)C10—C9—C8125.4 (2)
O4—N3—C5118.7 (3)C14—C9—C8116.1 (2)
C12—O2—C15118.8 (3)C9—C10—C11120.7 (2)
C2—C1—C6117.3 (2)C9—C10—H10119.7
C2—C1—C7123.4 (2)C11—C10—H10119.7
C6—C1—C7119.3 (2)C12—C11—C10119.5 (2)
C1—C2—C3122.1 (3)C12—C11—H11120.3
C1—C2—Cl1120.45 (19)C10—C11—H11120.3
C3—C2—Cl1117.4 (2)O2—C12—C13114.9 (3)
C4—C3—C2119.6 (3)O2—C12—C11125.0 (3)
C4—C3—H3120.2C13—C12—C11120.1 (2)
C2—C3—H3120.2C14—C13—C12120.7 (2)
C5—C4—C3118.9 (2)C14—C13—H13119.7
C5—C4—H4120.6C12—C13—H13119.7
C3—C4—H4120.6C13—C14—C9120.6 (2)
C4—C5—C6122.5 (3)C13—C14—H14119.7
C4—C5—N3119.5 (2)C9—C14—H14119.7
C6—C5—N3118.0 (3)O2—C15—H15A109.5
C5—C6—C1119.6 (2)O2—C15—H15B109.5
C5—C6—H6120.2H15A—C15—H15B109.5
C1—C6—H6120.2O2—C15—H15C109.5
N1—C7—C1118.5 (2)H15A—C15—H15C109.5
N1—C7—H7120.8H15B—C15—H15C109.5
D—H···AD—HH···AD···AD—H···A
N2—H2···O1i0.90 (1)2.15 (2)2.994 (3)156 (3)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N2—H2⋯O1i0.897 (10)2.150 (15)2.994 (3)156 (3)

Symmetry code: (i) .

  9 in total

1.  Synthesis of some bioactive 2-bromo-5-methoxy-N'-[4-(aryl)-1,3-thiazol-2-yl]benzohydrazide derivatives.

Authors:  K K Vijaya Raj; B Narayana; B V Ashalatha; N Suchetha Kumari; B K Sarojini
Journal:  Eur J Med Chem       Date:  2006-10-30       Impact factor: 6.514

2.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

3.  N-Acetyl-2-hydroxy-N'-[methoxy(1-methylindol-2-yl)methyl]benzohydrazide.

Authors:  Wagee A Yehye; Noorsaadah Abdul Rahman; Azhar Ariffin; Seik Weng Ng
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-08-23

4.  3-Bromo-N'-[(E)-4-hydroxy-benzyl-idene]benzohydrazide.

Authors:  Tao Yang; Guo-Biao Cao; Ji-Ming Xiang; Li-Hui Zhang
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-06-07

5.  N'-(2-Fluoro-benzo-yl)benzohydrazide.

Authors:  Krzysztof Ejsmont; Muhammad Zareef; Muhammad Arfan; Sarfaraz A Bashir; Jacek Zaleski
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-05-21

6.  Metal complexes with the ligand derived from 6-acetyl-1,3,7-trimethyllumazine and benzohydrazide. Molecular structures of two new Co(II) and Rh(III) complexes and analysis of in vitro antitumor activity.

Authors:  Sonia B Jiménez-Pulido; Fátima M Linares-Ordóñez; Jose M Martínez-Martos; Miguel N Moreno-Carretero; Miguel Quirós-Olozábal; María J Ramírez-Expósito
Journal:  J Inorg Biochem       Date:  2008-04-26       Impact factor: 4.155

7.  The crystal structures of copper(II), manganese(II), and nickel(II) complexes of a (Z)-2-hydroxy-N'-(2-oxoindolin-3-ylidene) benzohydrazide--potential antitumor agents.

Authors:  Xia Zhong; Hu-Lai Wei; Wei-Sheng Liu; Da-Qi Wang; Xing Wang
Journal:  Bioorg Med Chem Lett       Date:  2007-04-10       Impact factor: 2.823

8.  4-Chloro-N'-[(Z)-4-nitro-benzyl-idene]benzohydrazide monohydrate.

Authors:  Hoong-Kun Fun; P S Patil; Jyothi N Rao; B Kalluraya; Suchada Chantrapromma
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-08-06

9.  4-Chloro-N'-[(Z)-4-(dimethyl-amino)benzyl-idene]benzohydrazide mono-hydrate.

Authors:  Hoong-Kun Fun; P S Patil; Samuel Robinson Jebas; K V Sujith; B Kalluraya
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-07-26
  9 in total
  9 in total

1.  (E)-4-Hydr-oxy-N'-(4-nitro-benzyl-idene)benzohydrazide.

Authors:  Cong-Ming Li; Hong-Yan Ban
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-06-06

2.  (E)-N'-(5-Bromo-2-methoxy-benzyl-idene)-3-methoxy-benzohydrazide.

Authors:  Cong-Ming Li; Hong-Yan Ban
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-03-28

3.  (E)-2-Meth-oxy-N'-(4-nitro-benzyl-idene)benzohydrazide.

Authors:  Hong-Yan Ban; Cong-Ming Li
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-11-28

4.  N'-(3-Bromo-5-chloro-2-hy-droxy-benzyl-idene)-2H-1,3-benzodioxole-5-carbo-hydrazide.

Authors:  Jiao Wei; Hong-Yan Ban; Xiao-Zhi Sun
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-04-06

5.  (E)-4-Meth-oxy-N'-(4-nitro-benzyl-idene)benzohydrazide methanol monosolvate.

Authors:  Hong-Yan Ban
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-11-20

6.  (E)-N'-(4-Hydroxy-benzyl-idene)-4-hydroxy-benzohydrazide methanol solvate.

Authors:  Cong-Ming Li; Hong-Yan Ban
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-06-06

7.  (E)-N'-[1-(2-Hydroxy-phen-yl)ethyl-idene]-3-methoxy-benzohydrazide.

Authors:  Cong-Ming Li; Hong-Yan Ban
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-03-28

8.  (E)-2-Fluoro-N'-(4-nitro-benzyl-idene)benzo-hydrazide.

Authors:  Hong-Yun Wu; Hong-Yan Ban; Jia-Bo Wang; Li-Hua Zhang
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-12-18

9.  (E)-N'-(5-Bromo-2-meth-oxy-benzyl-idene)isonicotinohydrazide.

Authors:  Hong-Yan Ban
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-05-20
  9 in total

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