Literature DB >> 21582768

(E)-N'-(4-Hydroxy-benzyl-idene)-4-hydroxy-benzohydrazide methanol solvate.

Cong-Ming Li, Hong-Yan Ban.   

Abstract

The title compound, C(14)H(12)N(2)O(3)·CH(4)O, consists of a Schiff base mol-ecule and a methanol mol-ecule of crystallization. The Schiff base mol-ecule is nearly planar, the dihedral angle between the planes of the two benzene rings being 7.2 (2)°. The mol-ecule exists in the trans configuration with respect to the methyl-idene unit. In the crystal structure, the Schiff base and methanol mol-ecules are linked through O-H⋯O, N-H⋯O and O-H⋯N hydrogen bonds, forming a three-dimensional network.

Entities:  

Year:  2009        PMID: 21582768      PMCID: PMC2969426          DOI: 10.1107/S1600536809020078

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the biological activity of hydrazones, see: Zhong et al. (2007 ▶); Raj et al. (2007 ▶); Jimenez-Pulido et al. (2008 ▶). For related crystal structures, see: Ban & Li (2008a ▶,b ▶); Li & Ban (2009a ▶,b ▶); Yehye et al. (2008 ▶); Fun, Patil, Jebas et al. (2008 ▶); Fun, Patil, Rao et al. (2008 ▶); Yang et al. (2008 ▶); Ejsmont et al. (2008 ▶).

Experimental

Crystal data

C14H12N2O3·CH4O M = 288.30 Monoclinic, a = 12.927 (1) Å b = 9.277 (1) Å c = 11.946 (2) Å β = 100.147 (1)° V = 1410.2 (3) Å3 Z = 4 Mo Kα radiation μ = 0.10 mm−1 T = 298 K 0.30 × 0.30 × 0.28 mm

Data collection

Bruker SMART CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.971, T max = 0.973 8435 measured reflections 3064 independent reflections 2382 reflections with I > 2σ(I) R int = 0.023

Refinement

R[F 2 > 2σ(F 2)] = 0.040 wR(F 2) = 0.118 S = 1.06 3064 reflections 197 parameters 1 restraint H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.22 e Å−3 Δρmin = −0.17 e Å−3 Data collection: SMART (Bruker, 1998 ▶); cell refinement: SAINT (Bruker, 1998 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536809020078/wn2329sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809020078/wn2329Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C14H12N2O3·CH4OF(000) = 608
Mr = 288.30Dx = 1.358 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 2955 reflections
a = 12.927 (1) Åθ = 2.7–29.4°
b = 9.277 (1) ŵ = 0.10 mm1
c = 11.946 (2) ÅT = 298 K
β = 100.147 (1)°Block, colorless
V = 1410.2 (3) Å30.30 × 0.30 × 0.28 mm
Z = 4
Bruker SMART CCD area-detector diffractometer3064 independent reflections
Radiation source: fine-focus sealed tube2382 reflections with I > 2σ(I)
graphiteRint = 0.023
ω scansθmax = 27.0°, θmin = 1.6°
Absorption correction: multi-scan (SADABS; Sheldrick, 1996)h = −10→16
Tmin = 0.971, Tmax = 0.973k = −11→11
8435 measured reflectionsl = −15→14
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.040H atoms treated by a mixture of independent and constrained refinement
wR(F2) = 0.118w = 1/[σ2(Fo2) + (0.0556P)2 + 0.2974P] where P = (Fo2 + 2Fc2)/3
S = 1.06(Δ/σ)max < 0.001
3064 reflectionsΔρmax = 0.22 e Å3
197 parametersΔρmin = −0.17 e Å3
1 restraintExtinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methodsExtinction coefficient: 0.0112 (19)
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
N10.70137 (9)0.02841 (13)0.10898 (10)0.0378 (3)
N20.78657 (9)0.08908 (13)0.07052 (10)0.0383 (3)
O10.30453 (8)−0.37263 (12)0.13979 (9)0.0485 (3)
H10.2840−0.34020.19590.073*
O20.80648 (8)0.24758 (12)0.21426 (9)0.0475 (3)
O31.21247 (9)0.40526 (14)0.01129 (11)0.0588 (4)
H31.23480.47470.05080.088*
O40.79337 (10)0.50038 (13)0.33324 (9)0.0565 (3)
H40.80070.42860.29530.085*
C10.56666 (10)−0.15101 (15)0.07692 (11)0.0352 (3)
C20.52247 (11)−0.11701 (16)0.17196 (12)0.0413 (4)
H20.5519−0.04410.22080.050*
C30.43564 (11)−0.19027 (17)0.19437 (12)0.0410 (3)
H3A0.4071−0.16690.25820.049*
C40.39100 (10)−0.29833 (15)0.12210 (11)0.0342 (3)
C50.43415 (12)−0.33417 (17)0.02789 (13)0.0429 (4)
H50.4046−0.4072−0.02080.052*
C60.52155 (11)−0.26075 (17)0.00652 (12)0.0432 (4)
H60.5507−0.2857−0.05660.052*
C70.65706 (11)−0.07482 (16)0.04877 (12)0.0392 (3)
H70.6834−0.1026−0.01560.047*
C80.83705 (10)0.19889 (15)0.12912 (12)0.0347 (3)
C90.93302 (10)0.25557 (14)0.09212 (11)0.0341 (3)
C100.98624 (11)0.36828 (16)0.15352 (13)0.0420 (4)
H100.95900.40890.21330.050*
C111.07881 (12)0.42096 (17)0.12748 (13)0.0443 (4)
H111.11350.49660.16940.053*
C121.11995 (11)0.36095 (16)0.03881 (13)0.0403 (3)
C131.06694 (12)0.25061 (17)−0.02465 (13)0.0451 (4)
H131.09380.2116−0.08530.054*
C140.97452 (11)0.19819 (16)0.00163 (12)0.0413 (4)
H140.93940.1238−0.04140.050*
C150.74278 (19)0.6095 (2)0.26152 (16)0.0737 (6)
H15A0.74980.69990.30120.111*
H15B0.66960.58620.23970.111*
H15C0.77450.61660.19480.111*
H2A0.8014 (16)0.059 (2)0.0042 (11)0.080*
U11U22U33U12U13U23
N10.0316 (6)0.0421 (7)0.0427 (6)−0.0080 (5)0.0150 (5)0.0011 (5)
N20.0346 (6)0.0438 (7)0.0406 (7)−0.0115 (5)0.0174 (5)−0.0034 (5)
O10.0437 (6)0.0549 (7)0.0533 (7)−0.0208 (5)0.0262 (5)−0.0121 (5)
O20.0476 (6)0.0488 (6)0.0528 (6)−0.0110 (5)0.0271 (5)−0.0127 (5)
O30.0459 (6)0.0687 (8)0.0696 (8)−0.0257 (6)0.0318 (6)−0.0206 (6)
O40.0673 (8)0.0592 (7)0.0440 (6)0.0072 (6)0.0124 (5)−0.0073 (5)
C10.0315 (7)0.0377 (7)0.0382 (7)−0.0047 (6)0.0111 (6)0.0015 (6)
C20.0394 (8)0.0447 (8)0.0421 (8)−0.0109 (6)0.0135 (6)−0.0096 (6)
C30.0390 (8)0.0501 (9)0.0379 (7)−0.0068 (6)0.0178 (6)−0.0062 (6)
C40.0297 (7)0.0365 (7)0.0387 (7)−0.0042 (5)0.0123 (6)0.0025 (6)
C50.0427 (8)0.0450 (8)0.0445 (8)−0.0149 (7)0.0170 (6)−0.0126 (7)
C60.0441 (8)0.0498 (9)0.0405 (8)−0.0097 (7)0.0213 (7)−0.0085 (7)
C70.0364 (7)0.0452 (8)0.0392 (7)−0.0076 (6)0.0154 (6)−0.0015 (6)
C80.0319 (7)0.0348 (7)0.0395 (7)−0.0012 (6)0.0122 (6)0.0009 (6)
C90.0306 (7)0.0351 (7)0.0382 (7)−0.0029 (5)0.0106 (6)0.0015 (6)
C100.0396 (8)0.0460 (8)0.0440 (8)−0.0073 (6)0.0174 (6)−0.0085 (6)
C110.0404 (8)0.0463 (8)0.0487 (9)−0.0146 (7)0.0144 (7)−0.0118 (7)
C120.0339 (7)0.0438 (8)0.0462 (8)−0.0084 (6)0.0148 (6)0.0001 (6)
C130.0423 (8)0.0507 (9)0.0475 (8)−0.0093 (7)0.0217 (7)−0.0115 (7)
C140.0390 (8)0.0413 (8)0.0462 (8)−0.0117 (6)0.0146 (6)−0.0097 (6)
C150.1079 (17)0.0625 (12)0.0508 (11)−0.0016 (11)0.0144 (11)0.0044 (9)
N1—C71.2718 (18)C5—C61.3810 (19)
N1—N21.3853 (15)C5—H50.9300
N2—C81.3390 (18)C6—H60.9300
N2—H2A0.892 (9)C7—H70.9300
O1—C41.3611 (16)C8—C91.4846 (18)
O1—H10.8200C9—C101.3881 (19)
O2—C81.2395 (16)C9—C141.3943 (19)
O3—C121.3587 (16)C10—C111.3780 (19)
O3—H30.8200C10—H100.9300
O4—C151.410 (2)C11—C121.383 (2)
O4—H40.8200C11—H110.9300
C1—C61.382 (2)C12—C131.382 (2)
C1—C21.3939 (19)C13—C141.376 (2)
C1—C71.4549 (18)C13—H130.9300
C2—C31.3782 (19)C14—H140.9300
C2—H20.9300C15—H15A0.9600
C3—C41.381 (2)C15—H15B0.9600
C3—H3A0.9300C15—H15C0.9600
C4—C51.3817 (19)
C7—N1—N2115.06 (11)O2—C8—N2120.65 (12)
C8—N2—N1118.58 (11)O2—C8—C9121.28 (13)
C8—N2—H2A122.8 (14)N2—C8—C9118.01 (11)
N1—N2—H2A118.4 (14)C10—C9—C14118.34 (12)
C4—O1—H1109.5C10—C9—C8118.16 (12)
C12—O3—H3109.5C14—C9—C8123.46 (12)
C15—O4—H4109.5C11—C10—C9121.15 (13)
C6—C1—C2118.21 (12)C11—C10—H10119.4
C6—C1—C7119.15 (12)C9—C10—H10119.4
C2—C1—C7122.64 (13)C10—C11—C12119.76 (14)
C3—C2—C1120.74 (13)C10—C11—H11120.1
C3—C2—H2119.6C12—C11—H11120.1
C1—C2—H2119.6O3—C12—C13117.65 (13)
C2—C3—C4120.09 (12)O3—C12—C11122.48 (13)
C2—C3—H3A120.0C13—C12—C11119.87 (13)
C4—C3—H3A120.0C14—C13—C12120.20 (13)
O1—C4—C3122.32 (12)C14—C13—H13119.9
O1—C4—C5117.71 (13)C12—C13—H13119.9
C3—C4—C5119.97 (12)C13—C14—C9120.66 (13)
C6—C5—C4119.52 (13)C13—C14—H14119.7
C6—C5—H5120.2C9—C14—H14119.7
C4—C5—H5120.2O4—C15—H15A109.5
C5—C6—C1121.46 (13)O4—C15—H15B109.5
C5—C6—H6119.3H15A—C15—H15B109.5
C1—C6—H6119.3O4—C15—H15C109.5
N1—C7—C1122.36 (13)H15A—C15—H15C109.5
N1—C7—H7118.8H15B—C15—H15C109.5
C1—C7—H7118.8
D—H···AD—HH···AD···AD—H···A
O1—H1···O2i0.821.902.6877 (14)160
O1—H1···N1i0.822.613.1521 (16)125
O3—H3···O1ii0.821.902.7156 (15)172
O4—H4···O20.821.952.7629 (15)173
N2—H2A···O4iii0.89 (1)2.10 (1)2.9695 (16)165 (2)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O1—H1⋯O2i0.821.902.6877 (14)160
O1—H1⋯N1i0.822.613.1521 (16)125
O3—H3⋯O1ii0.821.902.7156 (15)172
O4—H4⋯O20.821.952.7629 (15)173
N2—H2A⋯O4iii0.892 (9)2.100 (11)2.9695 (16)164.6 (19)

Symmetry codes: (i) ; (ii) ; (iii) .

  13 in total

1.  Synthesis of some bioactive 2-bromo-5-methoxy-N'-[4-(aryl)-1,3-thiazol-2-yl]benzohydrazide derivatives.

Authors:  K K Vijaya Raj; B Narayana; B V Ashalatha; N Suchetha Kumari; B K Sarojini
Journal:  Eur J Med Chem       Date:  2006-10-30       Impact factor: 6.514

2.  N-Acetyl-2-hydroxy-N'-[methoxy(1-methylindol-2-yl)methyl]benzohydrazide.

Authors:  Wagee A Yehye; Noorsaadah Abdul Rahman; Azhar Ariffin; Seik Weng Ng
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-08-23

3.  (E)-N'-(5-Bromo-2-methoxy-benzyl-idene)-4-methoxy-benzohydrazide.

Authors:  Hong-Yan Ban; Cong-Ming Li
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-11-08

4.  3-Bromo-N'-[(E)-4-hydroxy-benzyl-idene]benzohydrazide.

Authors:  Tao Yang; Guo-Biao Cao; Ji-Ming Xiang; Li-Hui Zhang
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-06-07

5.  N'-(2-Fluoro-benzo-yl)benzohydrazide.

Authors:  Krzysztof Ejsmont; Muhammad Zareef; Muhammad Arfan; Sarfaraz A Bashir; Jacek Zaleski
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-05-21

6.  Metal complexes with the ligand derived from 6-acetyl-1,3,7-trimethyllumazine and benzohydrazide. Molecular structures of two new Co(II) and Rh(III) complexes and analysis of in vitro antitumor activity.

Authors:  Sonia B Jiménez-Pulido; Fátima M Linares-Ordóñez; Jose M Martínez-Martos; Miguel N Moreno-Carretero; Miguel Quirós-Olozábal; María J Ramírez-Expósito
Journal:  J Inorg Biochem       Date:  2008-04-26       Impact factor: 4.155

7.  The crystal structures of copper(II), manganese(II), and nickel(II) complexes of a (Z)-2-hydroxy-N'-(2-oxoindolin-3-ylidene) benzohydrazide--potential antitumor agents.

Authors:  Xia Zhong; Hu-Lai Wei; Wei-Sheng Liu; Da-Qi Wang; Xing Wang
Journal:  Bioorg Med Chem Lett       Date:  2007-04-10       Impact factor: 2.823

8.  4-Chloro-N'-[(Z)-4-nitro-benzyl-idene]benzohydrazide monohydrate.

Authors:  Hoong-Kun Fun; P S Patil; Jyothi N Rao; B Kalluraya; Suchada Chantrapromma
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-08-06

9.  4-Chloro-N'-[(Z)-4-(dimethyl-amino)benzyl-idene]benzohydrazide mono-hydrate.

Authors:  Hoong-Kun Fun; P S Patil; Samuel Robinson Jebas; K V Sujith; B Kalluraya
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-07-26

10.  (E)-N'-[1-(2-Hydroxy-phen-yl)ethyl-idene]-3-methoxy-benzohydrazide.

Authors:  Cong-Ming Li; Hong-Yan Ban
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-03-28
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