Literature DB >> 21578966

(E)-2-Meth-oxy-N'-(4-nitro-benzyl-idene)benzohydrazide.

Hong-Yan Ban, Cong-Ming Li.   

Abstract

In the title compound, C(15)H(13)N(3)O(4), the mol-ecule exists in a trans configuration with respect to the methyl-idene unit. The dihedral angle between the two benzene rings is 6.8 (2)°. The C-N-NH-C torsion angle is 3.4 (3)°. The mol-ecule possesses an intra-molecular N-H⋯O hydrogen bond. In the crystal structure, adjacent mol-ecules are linked through inter-molecular C-H⋯O hydrogen bonds, forming dimers.

Entities:  

Year:  2009        PMID: 21578966      PMCID: PMC2972042          DOI: 10.1107/S160053680905079X

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the biological activity of hydrazones, see: Zhong et al. (2007 ▶); Raj et al. (2007 ▶); Jimenez-Pulido et al. (2008 ▶). For related structures, see: Ban & Li (2008a ▶,b ▶); Li & Ban (2009a ▶,b ▶); Yehye et al. (2008 ▶); Fun, Patil, Jebas et al. (2008 ▶); Fun, Patil, Rao et al. (2008 ▶); Yang et al. (2008 ▶); Ejsmont et al. (2008 ▶).

Experimental

Crystal data

C15H13N3O4 M = 299.28 Monoclinic, a = 11.1843 (2) Å b = 11.3718 (3) Å c = 13.0519 (2) Å β = 121.792 (2)° V = 1410.96 (6) Å3 Z = 4 Mo Kα radiation μ = 0.11 mm−1 T = 298 K 0.15 × 0.13 × 0.12 mm

Data collection

Bruker SMART CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.985, T max = 0.988 8270 measured reflections 3048 independent reflections 1964 reflections with I > 2σ(I) R int = 0.026

Refinement

R[F 2 > 2σ(F 2)] = 0.047 wR(F 2) = 0.138 S = 1.02 3048 reflections 203 parameters 1 restraint H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.17 e Å−3 Δρmin = −0.29 e Å−3 Data collection: SMART (Bruker, 1998 ▶); cell refinement: SAINT (Bruker, 1998 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks global, I. DOI: 10.1107/S160053680905079X/wn2369sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S160053680905079X/wn2369Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C15H13N3O4F(000) = 624
Mr = 299.28Dx = 1.409 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 2137 reflections
a = 11.1843 (2) Åθ = 2.6–27.7°
b = 11.3718 (3) ŵ = 0.11 mm1
c = 13.0519 (2) ÅT = 298 K
β = 121.792 (2)°Block, colorless
V = 1410.96 (6) Å30.15 × 0.13 × 0.12 mm
Z = 4
Bruker SMART CCD area-detector diffractometer3048 independent reflections
Radiation source: fine-focus sealed tube1964 reflections with I > 2σ(I)
graphiteRint = 0.026
ω scansθmax = 27.0°, θmin = 2.1°
Absorption correction: multi-scan (SADABS; Sheldrick, 1996)h = −14→13
Tmin = 0.985, Tmax = 0.988k = −14→9
8270 measured reflectionsl = −16→15
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.047Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.138H atoms treated by a mixture of independent and constrained refinement
S = 1.02w = 1/[σ2(Fo2) + (0.0691P)2 + 0.1341P] where P = (Fo2 + 2Fc2)/3
3048 reflections(Δ/σ)max < 0.001
203 parametersΔρmax = 0.17 e Å3
1 restraintΔρmin = −0.29 e Å3
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
N10.02468 (14)0.74628 (13)0.11097 (11)0.0533 (4)
N20.10276 (15)0.75892 (13)0.23349 (11)0.0542 (4)
N3−0.37828 (15)0.80034 (14)−0.46112 (12)0.0584 (4)
O10.18128 (13)0.87506 (11)0.43486 (10)0.0632 (4)
O20.16350 (19)0.56837 (12)0.25823 (12)0.0989 (6)
O3−0.36814 (16)0.71210 (14)−0.50895 (11)0.0841 (5)
O4−0.45977 (16)0.87945 (13)−0.51687 (11)0.0874 (5)
C1−0.12755 (16)0.82699 (14)−0.08248 (13)0.0477 (4)
C2−0.13227 (17)0.72335 (14)−0.14102 (14)0.0513 (4)
H2−0.08040.6587−0.09580.062*
C3−0.21222 (17)0.71486 (15)−0.26456 (14)0.0518 (4)
H3−0.21480.6454−0.30320.062*
C4−0.28832 (16)0.81139 (14)−0.32966 (13)0.0477 (4)
C5−0.28638 (18)0.91571 (15)−0.27587 (15)0.0572 (4)
H5−0.33890.9798−0.32190.069*
C6−0.20458 (18)0.92326 (15)−0.15175 (15)0.0559 (4)
H6−0.20090.9936−0.11390.067*
C7−0.04485 (17)0.83471 (15)0.04892 (14)0.0523 (4)
H7−0.04320.90440.08700.063*
C80.17233 (18)0.66437 (16)0.30264 (14)0.0571 (4)
C90.26280 (16)0.68339 (15)0.43602 (13)0.0507 (4)
C100.26528 (17)0.78298 (15)0.49941 (13)0.0514 (4)
C110.35310 (19)0.78490 (18)0.62478 (15)0.0643 (5)
H110.35280.85000.66780.077*
C120.4398 (2)0.6917 (2)0.68511 (16)0.0730 (6)
H120.49820.69440.76860.088*
C130.4412 (2)0.5949 (2)0.62399 (16)0.0720 (6)
H130.50150.53260.66530.086*
C140.35239 (19)0.59045 (17)0.50043 (15)0.0621 (5)
H140.35230.52380.45910.075*
C150.1754 (2)0.97515 (17)0.49824 (18)0.0720 (6)
H15A0.14740.95070.55300.108*
H15B0.10831.03060.44170.108*
H15C0.26651.01140.54260.108*
H2A0.102 (2)0.8277 (12)0.2684 (17)0.080*
U11U22U33U12U13U23
N10.0562 (8)0.0618 (9)0.0314 (7)0.0037 (7)0.0159 (6)−0.0002 (6)
N20.0613 (9)0.0581 (9)0.0295 (7)0.0065 (7)0.0145 (6)−0.0012 (6)
N30.0601 (9)0.0703 (10)0.0373 (7)0.0068 (8)0.0204 (7)0.0109 (7)
O10.0706 (8)0.0654 (8)0.0440 (6)0.0069 (6)0.0237 (6)−0.0082 (6)
O20.1488 (15)0.0625 (9)0.0423 (7)0.0271 (9)0.0207 (8)−0.0018 (6)
O30.1009 (11)0.0921 (11)0.0426 (7)0.0188 (8)0.0264 (7)−0.0010 (7)
O40.0927 (11)0.0905 (10)0.0455 (7)0.0317 (8)0.0135 (7)0.0184 (7)
C10.0465 (9)0.0548 (10)0.0384 (8)0.0013 (7)0.0200 (7)0.0037 (7)
C20.0539 (9)0.0515 (10)0.0405 (8)0.0102 (7)0.0195 (7)0.0098 (7)
C30.0561 (10)0.0537 (10)0.0395 (8)0.0074 (7)0.0209 (7)0.0023 (7)
C40.0454 (8)0.0590 (10)0.0342 (8)0.0042 (7)0.0178 (7)0.0091 (7)
C50.0594 (10)0.0542 (10)0.0471 (9)0.0126 (8)0.0204 (8)0.0150 (8)
C60.0601 (10)0.0521 (10)0.0456 (9)0.0072 (8)0.0210 (8)0.0021 (7)
C70.0546 (10)0.0542 (10)0.0400 (8)0.0029 (8)0.0194 (7)−0.0003 (7)
C80.0660 (11)0.0585 (11)0.0359 (8)0.0066 (8)0.0193 (8)0.0009 (8)
C90.0494 (9)0.0630 (11)0.0341 (8)−0.0003 (8)0.0183 (7)0.0033 (7)
C100.0471 (9)0.0657 (11)0.0367 (8)−0.0049 (8)0.0189 (7)−0.0020 (7)
C110.0622 (11)0.0859 (14)0.0389 (9)−0.0129 (10)0.0225 (8)−0.0119 (9)
C120.0604 (11)0.1071 (17)0.0325 (9)−0.0109 (11)0.0115 (8)0.0056 (10)
C130.0623 (12)0.0882 (15)0.0474 (10)0.0045 (10)0.0165 (9)0.0172 (10)
C140.0630 (11)0.0681 (12)0.0453 (9)0.0049 (9)0.0217 (8)0.0073 (8)
C150.0915 (14)0.0618 (12)0.0640 (12)−0.0047 (10)0.0418 (11)−0.0136 (9)
N1—C71.268 (2)C5—C61.381 (2)
N1—N21.3672 (17)C5—H50.9300
N2—C81.355 (2)C6—H60.9300
N2—H2A0.908 (9)C7—H70.9300
N3—O41.2127 (18)C8—C91.498 (2)
N3—O31.2183 (18)C9—C141.393 (2)
N3—C41.467 (2)C9—C101.394 (2)
O1—C101.3619 (19)C10—C111.396 (2)
O1—C151.429 (2)C11—C121.371 (3)
O2—C81.215 (2)C11—H110.9300
C1—C21.390 (2)C12—C131.364 (3)
C1—C61.392 (2)C12—H120.9300
C1—C71.460 (2)C13—C141.379 (2)
C2—C31.375 (2)C13—H130.9300
C2—H20.9300C14—H140.9300
C3—C41.375 (2)C15—H15A0.9600
C3—H30.9300C15—H15B0.9600
C4—C51.373 (2)C15—H15C0.9600
C7—N1—N2117.55 (14)C1—C7—H7120.1
C8—N2—N1118.97 (14)O2—C8—N2121.41 (15)
C8—N2—H2A120.2 (13)O2—C8—C9121.28 (15)
N1—N2—H2A120.6 (13)N2—C8—C9117.30 (15)
O4—N3—O3123.15 (15)C14—C9—C10118.37 (14)
O4—N3—C4118.28 (15)C14—C9—C8114.99 (15)
O3—N3—C4118.56 (14)C10—C9—C8126.64 (15)
C10—O1—C15118.79 (13)O1—C10—C9117.77 (13)
C2—C1—C6118.59 (14)O1—C10—C11122.89 (16)
C2—C1—C7120.89 (14)C9—C10—C11119.34 (16)
C6—C1—C7120.52 (15)C12—C11—C10120.60 (18)
C3—C2—C1121.13 (14)C12—C11—H11119.7
C3—C2—H2119.4C10—C11—H11119.7
C1—C2—H2119.4C13—C12—C11120.70 (16)
C4—C3—C2118.51 (15)C13—C12—H12119.7
C4—C3—H3120.7C11—C12—H12119.7
C2—C3—H3120.7C12—C13—C14119.37 (18)
C5—C4—C3122.42 (14)C12—C13—H13120.3
C5—C4—N3119.23 (14)C14—C13—H13120.3
C3—C4—N3118.31 (15)C13—C14—C9121.58 (18)
C4—C5—C6118.42 (15)C13—C14—H14119.2
C4—C5—H5120.8C9—C14—H14119.2
C6—C5—H5120.8O1—C15—H15A109.5
C5—C6—C1120.92 (16)O1—C15—H15B109.5
C5—C6—H6119.5H15A—C15—H15B109.5
C1—C6—H6119.5O1—C15—H15C109.5
N1—C7—C1119.88 (16)H15A—C15—H15C109.5
N1—C7—H7120.1H15B—C15—H15C109.5
D—H···AD—HH···AD···AD—H···A
N2—H2A···O10.91 (1)1.94 (2)2.644 (2)133 (2)
C3—H3···O2i0.932.503.260 (2)140
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
N2—H2A⋯O10.91 (1)1.94 (2)2.644 (2)133 (2)
C3—H3⋯O2i 0.932.503.260 (2)140

Symmetry code: (i) .

  12 in total

1.  Synthesis of some bioactive 2-bromo-5-methoxy-N'-[4-(aryl)-1,3-thiazol-2-yl]benzohydrazide derivatives.

Authors:  K K Vijaya Raj; B Narayana; B V Ashalatha; N Suchetha Kumari; B K Sarojini
Journal:  Eur J Med Chem       Date:  2006-10-30       Impact factor: 6.514

2.  (E)-N'-(5-Bromo-2-methoxy-benzyl-idene)-3-methoxy-benzohydrazide.

Authors:  Cong-Ming Li; Hong-Yan Ban
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-03-28

3.  (E)-N'-(5-Bromo-2-methoxy-benzyl-idene)-4-methoxy-benzohydrazide.

Authors:  Hong-Yan Ban; Cong-Ming Li
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-11-08

4.  3-Bromo-N'-[(E)-4-hydroxy-benzyl-idene]benzohydrazide.

Authors:  Tao Yang; Guo-Biao Cao; Ji-Ming Xiang; Li-Hui Zhang
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-06-07

5.  (E)-N'-(2-Chloro-5-nitro-benzyl-idene)-4-methoxy-benzohydrazide.

Authors:  Hong-Yan Ban; Cong-Ming Li
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-10-25

6.  N'-(2-Fluoro-benzo-yl)benzohydrazide.

Authors:  Krzysztof Ejsmont; Muhammad Zareef; Muhammad Arfan; Sarfaraz A Bashir; Jacek Zaleski
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-05-21

7.  The crystal structures of copper(II), manganese(II), and nickel(II) complexes of a (Z)-2-hydroxy-N'-(2-oxoindolin-3-ylidene) benzohydrazide--potential antitumor agents.

Authors:  Xia Zhong; Hu-Lai Wei; Wei-Sheng Liu; Da-Qi Wang; Xing Wang
Journal:  Bioorg Med Chem Lett       Date:  2007-04-10       Impact factor: 2.823

8.  4-Chloro-N'-[(Z)-4-nitro-benzyl-idene]benzohydrazide monohydrate.

Authors:  Hoong-Kun Fun; P S Patil; Jyothi N Rao; B Kalluraya; Suchada Chantrapromma
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-08-06

9.  4-Chloro-N'-[(Z)-4-(dimethyl-amino)benzyl-idene]benzohydrazide mono-hydrate.

Authors:  Hoong-Kun Fun; P S Patil; Samuel Robinson Jebas; K V Sujith; B Kalluraya
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-07-26

10.  (E)-N'-[1-(2-Hydroxy-phen-yl)ethyl-idene]-3-methoxy-benzohydrazide.

Authors:  Cong-Ming Li; Hong-Yan Ban
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-03-28
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