Literature DB >> 21578753

3-(3-Methyl-phen-yl)-2-thioxo-1,3-thia-zolidin-4-one.

Durre Shahwar, M Nawaz Tahir, Asma Yasmeen, Naeem Ahmad, Muhammad Akmal Khan.   

Abstract

In the title compound, C(10)H(9)NOS(2), the dihedral angle between the rhodanine (2-thioxo-1,3-thia-zolidin-4-one) and 3-methyl-phenyl rings is 83.30 (3)°. The H atoms of the methyl group are disordered over two set of sites with an occupancy ratio of 0.58 (3):0.42 (3). In the crystal, the mol-ecules inter-act by way of C-H⋯π and C=O⋯π inter-actions.

Entities:  

Year:  2009        PMID: 21578753      PMCID: PMC2972004          DOI: 10.1107/S1600536809045863

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related structures, see: Shahwar et al. (2009a ▶,b ▶,c ▶,d ▶,e ▶).

Experimental

Crystal data

C10H9NOS2 M = 223.3 Monoclinic, a = 8.0775 (3) Å b = 6.4058 (2) Å c = 21.4715 (7) Å β = 106.068 (2)° V = 1067.59 (6) Å3 Z = 4 Mo Kα radiation μ = 0.46 mm−1 T = 296 K 0.32 × 0.24 × 0.22 mm

Data collection

Bruker Kappa APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2005 ▶) T min = 0.849, T max = 0.897 11841 measured reflections 2666 independent reflections 2116 reflections with I > 2σ(I) R int = 0.026

Refinement

R[F 2 > 2σ(F 2)] = 0.032 wR(F 2) = 0.087 S = 1.03 2666 reflections 129 parameters H-atom parameters constrained Δρmax = 0.27 e Å−3 Δρmin = −0.22 e Å−3 Data collection: APEX2 (Bruker, 2007 ▶); cell refinement: SAINT (Bruker, 2007 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997 ▶) and PLATON (Spek, 2009 ▶); software used to prepare material for publication: WinGX (Farrugia, 1999 ▶) and PLATON. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536809045863/hb5208sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809045863/hb5208Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C10H9NOS2F(000) = 464
Mr = 223.3Dx = 1.389 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 2666 reflections
a = 8.0775 (3) Åθ = 2.6–28.3°
b = 6.4058 (2) ŵ = 0.46 mm1
c = 21.4715 (7) ÅT = 296 K
β = 106.068 (2)°Prism, light yellow
V = 1067.59 (6) Å30.32 × 0.24 × 0.22 mm
Z = 4
Bruker Kappa APEXII CCD diffractometer2666 independent reflections
Radiation source: fine-focus sealed tube2116 reflections with I > 2σ(I)
graphiteRint = 0.026
Detector resolution: 7.40 pixels mm-1θmax = 28.3°, θmin = 2.6°
ω scansh = −10→10
Absorption correction: multi-scan (SADABS; Bruker, 2005)k = −8→8
Tmin = 0.849, Tmax = 0.897l = −28→28
11841 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.032Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.087H-atom parameters constrained
S = 1.03w = 1/[σ2(Fo2) + (0.0399P)2 + 0.2635P] where P = (Fo2 + 2Fc2)/3
2666 reflections(Δ/σ)max < 0.001
129 parametersΔρmax = 0.27 e Å3
0 restraintsΔρmin = −0.22 e Å3
Geometry. Bond distances, angles etc. have been calculated using the rounded fractional coordinates. All su's are estimated from the variances of the (full) variance-covariance matrix. The cell e.s.d.'s are taken into account in the estimation of distances, angles and torsion angles
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/UeqOcc. (<1)
S10.90452 (5)0.42703 (7)0.26996 (2)0.0484 (1)
S20.85641 (6)0.38555 (7)0.12935 (2)0.0511 (2)
O10.54228 (16)0.04248 (19)0.26950 (6)0.0537 (4)
N10.67528 (14)0.18699 (18)0.19889 (5)0.0324 (3)
C10.56186 (18)0.0913 (2)0.14230 (7)0.0337 (4)
C20.5937 (2)−0.1103 (2)0.12588 (8)0.0419 (5)
C30.4818 (2)−0.1972 (3)0.07148 (8)0.0501 (6)
C40.3436 (2)−0.0858 (3)0.03533 (8)0.0518 (6)
C50.3103 (2)0.1156 (3)0.05186 (7)0.0461 (5)
C60.42217 (18)0.2036 (3)0.10687 (7)0.0391 (5)
C70.65129 (19)0.1553 (2)0.26005 (7)0.0363 (4)
C80.77847 (19)0.2774 (3)0.31088 (7)0.0410 (5)
C90.80207 (17)0.3243 (2)0.19488 (7)0.0342 (4)
C100.1604 (2)0.2403 (4)0.01220 (10)0.0730 (8)
H20.68758−0.185170.150690.0502*
H30.50036−0.332540.059250.0602*
H40.27025−0.14709−0.001260.0621*
H60.402570.337920.119640.0469*
H8A0.851880.184030.342190.0492*
H8B0.719120.369220.333520.0492*
H10A0.066100.230260.031160.1095*0.58 (3)
H10B0.125500.18649−0.031210.1095*0.58 (3)
H10C0.193880.383820.011320.1095*0.58 (3)
H10D0.194240.31376−0.021270.1095*0.42 (3)
H10E0.124700.338750.039630.1095*0.42 (3)
H10F0.066530.14807−0.007080.1095*0.42 (3)
U11U22U33U12U13U23
S10.0426 (2)0.0565 (3)0.0445 (2)−0.0166 (2)0.0092 (2)−0.0128 (2)
S20.0545 (3)0.0578 (3)0.0449 (2)−0.0180 (2)0.0202 (2)−0.0016 (2)
O10.0636 (8)0.0544 (7)0.0476 (7)−0.0196 (6)0.0227 (6)0.0006 (5)
N10.0328 (6)0.0310 (5)0.0331 (6)−0.0024 (5)0.0088 (5)−0.0023 (5)
C10.0341 (7)0.0342 (7)0.0343 (7)−0.0077 (6)0.0120 (6)−0.0027 (6)
C20.0433 (8)0.0364 (8)0.0482 (9)−0.0029 (6)0.0166 (7)−0.0041 (7)
C30.0592 (10)0.0442 (9)0.0529 (10)−0.0167 (8)0.0253 (8)−0.0169 (8)
C40.0521 (10)0.0673 (11)0.0375 (8)−0.0261 (9)0.0150 (7)−0.0131 (8)
C50.0379 (8)0.0627 (10)0.0371 (8)−0.0096 (7)0.0094 (6)0.0066 (7)
C60.0385 (8)0.0399 (8)0.0395 (8)−0.0039 (6)0.0119 (6)0.0011 (6)
C70.0395 (8)0.0343 (7)0.0359 (7)0.0028 (6)0.0118 (6)0.0018 (6)
C80.0388 (8)0.0481 (9)0.0351 (7)0.0015 (7)0.0087 (6)−0.0026 (7)
C90.0314 (7)0.0319 (7)0.0389 (7)−0.0006 (5)0.0091 (6)−0.0025 (6)
C100.0505 (11)0.0965 (17)0.0611 (12)−0.0013 (11)−0.0027 (9)0.0161 (11)
S1—C81.7952 (17)C7—C81.496 (2)
S1—C91.7258 (15)C2—H20.9300
S2—C91.6335 (15)C3—H30.9300
O1—C71.199 (2)C4—H40.9300
N1—C11.4406 (18)C6—H60.9300
N1—C71.3943 (18)C8—H8A0.9700
N1—C91.3707 (18)C8—H8B0.9700
C1—C21.3814 (19)C10—H10A0.9600
C1—C61.376 (2)C10—H10B0.9600
C2—C31.381 (2)C10—H10C0.9600
C3—C41.371 (2)C10—H10D0.9600
C4—C51.384 (3)C10—H10E0.9600
C5—C61.392 (2)C10—H10F0.9600
C5—C101.503 (3)
C8—S1—C993.63 (7)C2—C3—H3120.00
C1—N1—C7120.71 (12)C4—C3—H3120.00
C1—N1—C9122.13 (11)C3—C4—H4119.00
C7—N1—C9116.98 (11)C5—C4—H4119.00
N1—C1—C2119.55 (13)C1—C6—H6120.00
N1—C1—C6118.46 (13)C5—C6—H6120.00
C2—C1—C6121.98 (14)S1—C8—H8A110.00
C1—C2—C3117.92 (15)S1—C8—H8B110.00
C2—C3—C4120.60 (17)C7—C8—H8A110.00
C3—C4—C5121.72 (16)C7—C8—H8B110.00
C4—C5—C6117.93 (16)H8A—C8—H8B109.00
C4—C5—C10122.24 (16)C5—C10—H10A109.00
C6—C5—C10119.83 (17)C5—C10—H10B109.00
C1—C6—C5119.84 (16)C5—C10—H10C109.00
O1—C7—N1123.17 (14)C5—C10—H10D109.00
O1—C7—C8125.44 (14)C5—C10—H10E109.00
N1—C7—C8111.39 (12)C5—C10—H10F109.00
S1—C8—C7106.86 (10)H10A—C10—H10B109.00
S1—C9—S2122.64 (8)H10A—C10—H10C109.00
S1—C9—N1111.07 (10)H10B—C10—H10C109.00
S2—C9—N1126.29 (11)H10D—C10—H10E109.00
C1—C2—H2121.00H10D—C10—H10F109.00
C3—C2—H2121.00H10E—C10—H10F109.00
C9—S1—C8—C7−2.42 (12)C7—N1—C9—S2179.24 (11)
C8—S1—C9—S2−177.72 (10)N1—C1—C2—C3179.72 (14)
C8—S1—C9—N11.42 (11)C6—C1—C2—C31.1 (2)
C7—N1—C1—C2−85.14 (18)N1—C1—C6—C5179.89 (14)
C7—N1—C1—C693.56 (16)C2—C1—C6—C5−1.5 (2)
C9—N1—C1—C299.88 (17)C1—C2—C3—C4−0.2 (2)
C9—N1—C1—C6−81.42 (18)C2—C3—C4—C5−0.4 (3)
C1—N1—C7—O13.2 (2)C3—C4—C5—C60.0 (3)
C1—N1—C7—C8−177.29 (12)C3—C4—C5—C10179.27 (17)
C9—N1—C7—O1178.41 (14)C4—C5—C6—C10.9 (2)
C9—N1—C7—C8−2.06 (18)C10—C5—C6—C1−178.41 (15)
C1—N1—C9—S1175.30 (10)O1—C7—C8—S1−177.61 (13)
C1—N1—C9—S2−5.60 (19)N1—C7—C8—S12.88 (16)
C7—N1—C9—S10.14 (16)
D—H···AD—HH···AD···AD—H···A
C8—H8B···Cg2i0.972.593.5219 (17)162
C7—O1···Cg1i1.199 (2)2.9413 (14)4.1070 (16)163.94 (11)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
C8—H8BCg2i 0.972.593.5219 (17)162
C7—O1⋯Cg1i 1.20 (1)2.94 (1)4.1070 (16)164 (1)

Symmetry code: (i) . Cg1 and Cg2 are the centroids of the S1/C8/C7/N1/C9 and C1—C6 rings, respectively.

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2.  (5Z)-5-(2-Hydroxy-benzyl-idene)-3-phenyl-2-thioxo-1,3-thia-zolidin-4-one.

Authors:  Durre Shahwar; M Nawaz Tahir; Muhammad Asam Raza; Bushra Iqbal
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-10-28

3.  (5Z)-5-(2-Hydroxy-benzyl-idene)-2-thioxo-1,3-thia-zolidin-4-one methanol hemisolvate.

Authors:  Durre Shahwar; M Nawaz Tahir; Muhammad Asam Raza; Bushra Iqbal; Sana Naz
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-10-03

4.  (5E)-5-(4-Hydr-oxy-3-methoxy-benzyl-idene)-2-thioxo-1,3-thia-zolidin-4-one methanol monosolvate.

Authors:  Durre Shahwar; M Nawaz Tahir; Muhammad Asam Raza; Maria Saddaf; Sana Majeed
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-10-03

5.  3-Cyclo-hexyl-2-thioxo-1,3-thia-zolidin-4-one.

Authors:  Durre Shahwar; M Nawaz Tahir; Asma Yasmeen; Naeem Ahmad; Muhammad Akmal Khan
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-11-07

6.  3-(2-Methyl-phen-yl)-2-thioxo-1,3-thia-zolidin-4-one.

Authors:  Durre Shahwar; M Nawaz Tahir; Asma Yasmeen; Naeem Ahmad; Muhammad Akmal Khan
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-11-07

7.  Structure validation in chemical crystallography.

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2.  3-(4-Methyl-phen-yl)-2-thioxo-1,3-thia-zolidin-4-one.

Authors:  Durre Shahwar; M Nawaz Tahir; Naeem Ahmad; Muhammad Asam Raza; Saherish Aslam
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