Literature DB >> 21522643

3-Benzyl-2-sulfanyl-idene-1,3-thia-zolidin-4-one.

Durre Shahwar, M Nawaz Tahir, Muhammad Asam Raza, Naeem Ahmad, Saherish Aslam.   

Abstract

In the title compound, C(10)H(9)NOS(2), the five-membered heterocyclic ring and the benzyl moiety are oriented at a dihedral angle of 77.25 (4)°. In the crystal, infinite polymeric C(6) chains extending along [001] are formed due to C-H⋯O hydrogen bonds. C-H⋯π inter-actions link the chains, building up a three-dimensional network.

Entities:  

Year:  2010        PMID: 21522643      PMCID: PMC3050282          DOI: 10.1107/S1600536810051548

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For background to our inter­est in the sythesis of thia­zolidin derivatives and related structures, see: Shahwar et al. (2009a ▶,b ▶, 2010 ▶). For graph-set notation, see: Bernstein et al. (1995 ▶).

Experimental

Crystal data

C10H9NOS2 M = 223.30 Monoclinic, a = 13.3271 (4) Å b = 5.9025 (2) Å c = 13.0396 (4) Å β = 92.812 (1)° V = 1024.50 (6) Å3 Z = 4 Mo Kα radiation μ = 0.48 mm−1 T = 296 K 0.25 × 0.20 × 0.10 mm

Data collection

Bruker Kappa APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2005 ▶) T min = 0.939, T max = 0.950 7899 measured reflections 1818 independent reflections 1594 reflections with I > 2σ(I) R int = 0.023

Refinement

R[F 2 > 2σ(F 2)] = 0.030 wR(F 2) = 0.079 S = 1.07 1818 reflections 127 parameters H-atom parameters constrained Δρmax = 0.22 e Å−3 Δρmin = −0.14 e Å−3 Data collection: APEX2 (Bruker, 2009 ▶); cell refinement: SAINT (Bruker, 2009 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997 ▶) and PLATON (Spek, 2009 ▶); software used to prepare material for publication: WinGX (Farrugia, 1999 ▶) and PLATON. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536810051548/dn2634sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810051548/dn2634Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C10H9NOS2F(000) = 464
Mr = 223.30Dx = 1.448 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 1594 reflections
a = 13.3271 (4) Åθ = 3.1–25.3°
b = 5.9025 (2) ŵ = 0.48 mm1
c = 13.0396 (4) ÅT = 296 K
β = 92.812 (1)°Plate, light yellow
V = 1024.50 (6) Å30.25 × 0.20 × 0.10 mm
Z = 4
Bruker Kappa APEXII CCD diffractometer1818 independent reflections
Radiation source: fine-focus sealed tube1594 reflections with I > 2σ(I)
graphiteRint = 0.023
Detector resolution: 8.10 pixels mm-1θmax = 25.3°, θmin = 3.1°
ω scansh = −15→15
Absorption correction: multi-scan (SADABS; Bruker, 2005)k = −6→7
Tmin = 0.939, Tmax = 0.950l = −15→15
7899 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.030Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.079H-atom parameters constrained
S = 1.07w = 1/[σ2(Fo2) + (0.031P)2 + 0.4046P] where P = (Fo2 + 2Fc2)/3
1818 reflections(Δ/σ)max < 0.001
127 parametersΔρmax = 0.22 e Å3
0 restraintsΔρmin = −0.14 e Å3
Geometry. Bond distances, angles etc. have been calculated using the rounded fractional coordinates. All su's are estimated from the variances of the (full) variance-covariance matrix. The cell e.s.d.'s are taken into account in the estimation of distances, angles and torsion angles
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
S10.06040 (4)0.13455 (10)0.18585 (4)0.0638 (2)
S20.09221 (4)0.28252 (9)−0.02729 (3)0.0557 (2)
O10.28194 (12)0.7373 (2)0.06176 (11)0.0697 (5)
N10.18237 (9)0.4684 (2)0.12987 (9)0.0396 (4)
C10.30044 (11)0.3660 (3)0.27679 (11)0.0376 (5)
C20.33354 (12)0.1781 (3)0.22537 (13)0.0443 (5)
C30.40774 (14)0.0402 (3)0.26955 (15)0.0565 (6)
C40.44939 (15)0.0897 (4)0.36558 (16)0.0632 (7)
C50.41747 (15)0.2765 (4)0.41688 (15)0.0625 (7)
C60.34380 (14)0.4147 (3)0.37321 (13)0.0509 (6)
C70.21689 (12)0.5173 (3)0.23542 (12)0.0424 (5)
C80.11439 (12)0.3010 (3)0.10525 (13)0.0437 (5)
C90.16998 (14)0.5229 (3)−0.05169 (13)0.0531 (6)
C100.21917 (13)0.5926 (3)0.04939 (13)0.0458 (5)
H20.305740.143740.160420.0531*
H30.42949−0.086090.234250.0678*
H40.49897−0.003400.395470.0758*
H50.445700.310470.481700.0749*
H60.322960.541690.408640.0611*
H7A0.160400.503130.279150.0509*
H7B0.239720.673250.239230.0509*
H9A0.220400.48311−0.099750.0637*
H9B0.129600.64606−0.080700.0637*
U11U22U33U12U13U23
S10.0582 (3)0.0707 (4)0.0624 (3)−0.0218 (3)0.0027 (2)0.0073 (3)
S20.0562 (3)0.0648 (3)0.0451 (3)−0.0033 (2)−0.0074 (2)−0.0115 (2)
O10.0892 (10)0.0615 (9)0.0584 (8)−0.0281 (8)0.0049 (7)0.0054 (7)
N10.0425 (7)0.0405 (7)0.0354 (7)−0.0013 (6)−0.0010 (5)−0.0012 (5)
C10.0404 (8)0.0379 (8)0.0347 (8)−0.0064 (7)0.0044 (6)−0.0013 (6)
C20.0463 (9)0.0459 (9)0.0407 (9)0.0003 (7)0.0033 (7)−0.0057 (7)
C30.0555 (10)0.0499 (11)0.0648 (12)0.0086 (9)0.0100 (9)−0.0004 (9)
C40.0541 (11)0.0672 (13)0.0675 (13)0.0063 (10)−0.0052 (9)0.0162 (11)
C50.0660 (12)0.0712 (13)0.0483 (11)−0.0066 (10)−0.0159 (9)0.0056 (10)
C60.0612 (11)0.0503 (10)0.0407 (9)−0.0039 (8)−0.0029 (8)−0.0065 (8)
C70.0502 (9)0.0407 (9)0.0363 (8)0.0017 (7)0.0020 (7)−0.0064 (7)
C80.0395 (8)0.0464 (9)0.0448 (9)0.0005 (7)−0.0018 (7)−0.0047 (7)
C90.0587 (10)0.0617 (12)0.0387 (9)0.0052 (9)0.0020 (8)0.0030 (8)
C100.0516 (9)0.0426 (9)0.0433 (9)0.0018 (8)0.0035 (7)0.0014 (7)
S1—C81.6315 (18)C4—C51.368 (3)
S2—C81.7424 (17)C5—C61.378 (3)
S2—C91.7947 (19)C9—C101.501 (2)
O1—C101.201 (2)C2—H20.9300
N1—C71.459 (2)C3—H30.9300
N1—C81.368 (2)C4—H40.9300
N1—C101.389 (2)C5—H50.9300
C1—C21.380 (2)C6—H60.9300
C1—C61.388 (2)C7—H7A0.9700
C1—C71.507 (2)C7—H7B0.9700
C2—C31.384 (2)C9—H9A0.9700
C3—C41.376 (3)C9—H9B0.9700
C8—S2—C993.15 (8)C1—C2—H2120.00
C7—N1—C8122.61 (13)C3—C2—H2120.00
C7—N1—C10120.12 (13)C2—C3—H3120.00
C8—N1—C10117.27 (13)C4—C3—H3120.00
C2—C1—C6118.55 (15)C3—C4—H4120.00
C2—C1—C7123.43 (14)C5—C4—H4120.00
C6—C1—C7117.98 (15)C4—C5—H5120.00
C1—C2—C3120.62 (16)C6—C5—H5120.00
C2—C3—C4120.13 (18)C1—C6—H6120.00
C3—C4—C5119.66 (19)C5—C6—H6120.00
C4—C5—C6120.49 (18)N1—C7—H7A109.00
C1—C6—C5120.55 (17)N1—C7—H7B109.00
N1—C7—C1114.46 (13)C1—C7—H7A109.00
S1—C8—S2122.86 (10)C1—C7—H7B109.00
S1—C8—N1126.28 (13)H7A—C7—H7B108.00
S2—C8—N1110.86 (12)S2—C9—H9A110.00
S2—C9—C10106.99 (12)S2—C9—H9B110.00
O1—C10—N1122.91 (16)C10—C9—H9A110.00
O1—C10—C9125.76 (16)C10—C9—H9B110.00
N1—C10—C9111.33 (14)H9A—C9—H9B109.00
C9—S2—C8—S1176.53 (12)C6—C1—C2—C30.6 (2)
C9—S2—C8—N1−4.19 (13)C7—C1—C2—C3−177.17 (16)
C8—S2—C9—C105.77 (13)C2—C1—C6—C5−0.7 (3)
C8—N1—C7—C182.66 (18)C7—C1—C6—C5177.15 (17)
C10—N1—C7—C1−96.82 (17)C2—C1—C7—N1−8.0 (2)
C7—N1—C8—S10.9 (2)C6—C1—C7—N1174.18 (14)
C7—N1—C8—S2−178.35 (11)C1—C2—C3—C4−0.1 (3)
C10—N1—C8—S1−179.60 (13)C2—C3—C4—C5−0.4 (3)
C10—N1—C8—S21.15 (18)C3—C4—C5—C60.2 (3)
C7—N1—C10—O12.5 (2)C4—C5—C6—C10.4 (3)
C7—N1—C10—C9−177.06 (14)S2—C9—C10—O1174.34 (16)
C8—N1—C10—O1−177.01 (16)S2—C9—C10—N1−6.12 (17)
C8—N1—C10—C93.4 (2)
Cg is the centroid of the C1–C6 ring.
D—H···AD—HH···AD···AD—H···A
C6—H6···O1i0.932.473.338 (2)156
C3—H3···Cgii0.932.953.674 (2)136
C9—H9a···Cgiii0.972.663.588 (2)160
Table 1

Hydrogen-bond geometry (Å, °)

Cg is the centroid of the C1–C6 ring.

D—H⋯AD—HH⋯ADAD—H⋯A
C6—H6⋯O1i0.932.473.338 (2)156
C3—H3⋯Cgii0.932.953.674 (2)136
C9—H9a⋯Cgiii0.972.663.588 (2)160

Symmetry codes: (i) ; (ii) ; (iii) .

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