Literature DB >> 21576492

Structural topology of phospholamban pentamer in lipid bilayers by a hybrid solution and solid-state NMR method.

Raffaello Verardi1, Lei Shi, Nathaniel J Traaseth, Naomi Walsh, Gianluigi Veglia.   

Abstract

Phospholamban (PLN) is a type II membrane protein that inhibits the sarcoplasmic reticulum Ca(2+)-ATPase (SERCA), thereby regulating calcium homeostasis in cardiac muscle. In membranes, PLN forms pentamers that have been proposed to function either as a storage for active monomers or as ion channels. Here, we report the T-state structure of pentameric PLN solved by a hybrid solution and solid-state NMR method. In lipid bilayers, PLN adopts a pinwheel topology with a narrow hydrophobic pore, which excludes ion transport. In the T state, the cytoplasmic amphipathic helices (domains Ia) are absorbed into the lipid bilayer with the transmembrane domains arranged in a left-handed coiled-coil configuration, crossing the bilayer with a tilt angle of approximately 11° with respect to the membrane normal. The tilt angle difference between the monomer and pentamer is approximately 13°, showing that intramembrane helix-helix association forces dominate over the hydrophobic mismatch, driving the overall topology of the transmembrane assembly. Our data reveal that both topology and function of PLN are shaped by the interactions with lipids, which fine-tune the regulation of SERCA.

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Year:  2011        PMID: 21576492      PMCID: PMC3107283          DOI: 10.1073/pnas.1016535108

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  65 in total

1.  Rotational dynamics of phospholamban determined by multifrequency electron paramagnetic resonance.

Authors:  Yuri E Nesmelov; Christine B Karim; Likai Song; Peter G Fajer; David D Thomas
Journal:  Biophys J       Date:  2007-06-15       Impact factor: 4.033

Review 2.  Magnetic resonance in the solid state: applications to protein folding, amyloid fibrils and membrane proteins.

Authors:  Marc Baldus
Journal:  Eur Biophys J       Date:  2007-05-31       Impact factor: 1.733

3.  On the function of pentameric phospholamban: ion channel or storage form?

Authors:  Lucia Becucci; Alessandro Cembran; Christine B Karim; David D Thomas; Rolando Guidelli; Jiali Gao; Gianluigi Veglia
Journal:  Biophys J       Date:  2009-05-20       Impact factor: 4.033

4.  Structure of a potentially open state of a proton-activated pentameric ligand-gated ion channel.

Authors:  Ricarda J C Hilf; Raimund Dutzler
Journal:  Nature       Date:  2008-11-05       Impact factor: 49.962

5.  X-ray structure of a pentameric ligand-gated ion channel in an apparently open conformation.

Authors:  Nicolas Bocquet; Hugues Nury; Marc Baaden; Chantal Le Poupon; Jean-Pierre Changeux; Marc Delarue; Pierre-Jean Corringer
Journal:  Nature       Date:  2008-11-05       Impact factor: 49.962

6.  Transmembrane helix uniformity examined by spectral mapping of torsion angles.

Authors:  Richard C Page; Sanguk Kim; Timothy A Cross
Journal:  Structure       Date:  2008-05       Impact factor: 5.006

7.  Spectroscopic validation of the pentameric structure of phospholamban.

Authors:  Nathaniel J Traaseth; Raffaello Verardi; Kurt D Torgersen; Christine B Karim; David D Thomas; Gianluigi Veglia
Journal:  Proc Natl Acad Sci U S A       Date:  2007-09-05       Impact factor: 11.205

8.  Cytoplasmic residues of phospholamban interact with membrane surfaces in the presence of SERCA: a new role for phospholipids in the regulation of cardiac calcium cycling?

Authors:  Eleri Hughes; Jonathan C Clayton; David A Middleton
Journal:  Biochim Biophys Acta       Date:  2008-11-14

9.  The structural topology of wild-type phospholamban in oriented lipid bilayers using 15N solid-state NMR spectroscopy.

Authors:  Shadi Abu-Baker; Jun-Xia Lu; Shidong Chu; Kiran K Shetty; Peter L Gor'kov; Gary A Lorigan
Journal:  Protein Sci       Date:  2007-09-28       Impact factor: 6.725

10.  MolProbity: all-atom contacts and structure validation for proteins and nucleic acids.

Authors:  Ian W Davis; Andrew Leaver-Fay; Vincent B Chen; Jeremy N Block; Gary J Kapral; Xueyi Wang; Laura W Murray; W Bryan Arendall; Jack Snoeyink; Jane S Richardson; David C Richardson
Journal:  Nucleic Acids Res       Date:  2007-04-22       Impact factor: 16.971

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  91 in total

1.  High-resolution membrane protein structure by joint calculations with solid-state NMR and X-ray experimental data.

Authors:  Ming Tang; Lindsay J Sperling; Deborah A Berthold; Charles D Schwieters; Anna E Nesbitt; Andrew J Nieuwkoop; Robert B Gennis; Chad M Rienstra
Journal:  J Biomol NMR       Date:  2011-09-22       Impact factor: 2.835

2.  Topology and immersion depth of an integral membrane protein by paramagnetic rates from dissolved oxygen.

Authors:  M Sameer Al-Abdul-Wahid; Raffaello Verardi; Gianluigi Veglia; R Scott Prosser
Journal:  J Biomol NMR       Date:  2011-09-27       Impact factor: 2.835

3.  Multidimensional oriented solid-state NMR experiments enable the sequential assignment of uniformly 15N labeled integral membrane proteins in magnetically aligned lipid bilayers.

Authors:  Kaustubh R Mote; T Gopinath; Nathaniel J Traaseth; Jason Kitchen; Peter L Gor'kov; William W Brey; Gianluigi Veglia
Journal:  J Biomol NMR       Date:  2011-11       Impact factor: 2.835

4.  Phospholamban phosphorylation increases the passive calcium leak from cardiac sarcoplasmic reticulum.

Authors:  Roozbeh Aschar-Sobbi; Teresa L Emmett; Gary J Kargacin; Margaret E Kargacin
Journal:  Pflugers Arch       Date:  2012-07-07       Impact factor: 3.657

5.  Probing ground and excited states of phospholamban in model and native lipid membranes by magic angle spinning NMR spectroscopy.

Authors:  Martin Gustavsson; Nathaniel J Traaseth; Gianluigi Veglia
Journal:  Biochim Biophys Acta       Date:  2011-08-03

6.  Spectral editing at ultra-fast magic-angle-spinning in solid-state NMR: facilitating protein sequential signal assignment by HIGHLIGHT approach.

Authors:  Songlin Wang; Isamu Matsuda; Fei Long; Yoshitaka Ishii
Journal:  J Biomol NMR       Date:  2016-01-19       Impact factor: 2.835

7.  Atomistic insights into human Cys-loop receptors by solution NMR.

Authors:  David D Mowrey; Monica N Kinde; Yan Xu; Pei Tang
Journal:  Biochim Biophys Acta       Date:  2014-03-28

Review 8.  Helical membrane protein conformations and their environment.

Authors:  Timothy A Cross; Dylan T Murray; Anthony Watts
Journal:  Eur Biophys J       Date:  2013-09-01       Impact factor: 1.733

9.  Open-channel structures of the human glycine receptor α1 full-length transmembrane domain.

Authors:  David D Mowrey; Tanxing Cui; Yuanyuan Jia; Dejian Ma; Alexander M Makhov; Peijun Zhang; Pei Tang; Yan Xu
Journal:  Structure       Date:  2013-08-29       Impact factor: 5.006

10.  Gd3+-chelated lipid accelerates solid-state NMR spectroscopy of seven-transmembrane proteins.

Authors:  Chang Liu; Jing Liu; Xiaojun Xu; ShengQi Xiang; Shenlin Wang
Journal:  J Biomol NMR       Date:  2017-05-30       Impact factor: 2.835

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