Literature DB >> 17573437

Rotational dynamics of phospholamban determined by multifrequency electron paramagnetic resonance.

Yuri E Nesmelov1, Christine B Karim, Likai Song, Peter G Fajer, David D Thomas.   

Abstract

We have used multifrequency electron paramagnetic resonance to define the multistate structural dynamics of an integral membrane protein, phospholamban (PLB), in a lipid bilayer. PLB is a key regulator of cardiac calcium transport, and its function requires transitions between distinct states of intramolecular dynamics. Monomeric PLB was synthesized with the TOAC spin label at positions 11 (in the cytoplasmic domain) and 46 (in the transmembrane domain) and reconstituted into lipid bilayers. Unlike other protein spin labels, TOAC reports directly the motion of the peptide backbone, so quantitative analysis of its dynamics is worthwhile. Electron paramagnetic resonance spectra at 9.4 GHz (X-band) and 94 GHz (W-band) were analyzed in terms of anisotropic rotational diffusion of the two domains. Motion of the transmembrane domain is highly restricted, while the cytoplasmic domain exhibits two distinct conformations, a major one with moderately restricted nanosecond dynamics (T) and another with nearly unrestricted subnanosecond motion (R). The global analysis of spectra at two frequencies yielded values for the rotational correlation times and order parameters that were much more precisely determined than at either frequency alone. Multifrequency EPR is a powerful approach for analysis of complex rotational dynamics of proteins.

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Year:  2007        PMID: 17573437      PMCID: PMC1989693          DOI: 10.1529/biophysj.107.108910

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  30 in total

1.  A structural model of the complex formed by phospholamban and the calcium pump of sarcoplasmic reticulum obtained by molecular mechanics.

Authors:  Michael C Hutter; Joachim Krebs; Jens Meiler; Christian Griesinger; Ernesto Carafoli; Volkhard Helms
Journal:  Chembiochem       Date:  2002-12-02       Impact factor: 3.164

2.  Solid-state NMR and rigid body molecular dynamics to determine domain orientations of monomeric phospholamban.

Authors:  Alessandro Mascioni; Christine Karim; Jamillah Zamoon; David D Thomas; Gianluigi Veglia
Journal:  J Am Chem Soc       Date:  2002-08-14       Impact factor: 15.419

3.  NMR solution structure and topological orientation of monomeric phospholamban in dodecylphosphocholine micelles.

Authors:  Jamillah Zamoon; Alessandro Mascioni; David D Thomas; Gianluigi Veglia
Journal:  Biophys J       Date:  2003-10       Impact factor: 4.033

4.  Electron paramagnetic resonance reveals a large-scale conformational change in the cytoplasmic domain of phospholamban upon binding to the sarcoplasmic reticulum Ca-ATPase.

Authors:  Tara L Kirby; Christine B Karim; David D Thomas
Journal:  Biochemistry       Date:  2004-05-18       Impact factor: 3.162

5.  (1)H/(15)N heteronuclear NMR spectroscopy shows four dynamic domains for phospholamban reconstituted in dodecylphosphocholine micelles.

Authors:  Emily E Metcalfe; Jamillah Zamoon; David D Thomas; Gianluigi Veglia
Journal:  Biophys J       Date:  2004-08       Impact factor: 4.033

6.  Brownian motion in biological membranes.

Authors:  P G Saffman; M Delbrück
Journal:  Proc Natl Acad Sci U S A       Date:  1975-08       Impact factor: 11.205

Review 7.  Phospholamban: a crucial regulator of cardiac contractility.

Authors:  David H MacLennan; Evangelia G Kranias
Journal:  Nat Rev Mol Cell Biol       Date:  2003-07       Impact factor: 94.444

8.  Spin-labeled gramicidin a: channel formation and dissociation.

Authors:  Boris G Dzikovski; Petr P Borbat; Jack H Freed
Journal:  Biophys J       Date:  2004-08-23       Impact factor: 4.033

9.  Phospholamban structural dynamics in lipid bilayers probed by a spin label rigidly coupled to the peptide backbone.

Authors:  Christine B Karim; Tara L Kirby; Zhiwen Zhang; Yuri Nesmelov; David D Thomas
Journal:  Proc Natl Acad Sci U S A       Date:  2004-09-24       Impact factor: 11.205

10.  Mapping backbone dynamics in solution with site-directed spin labeling: GCN4-58 bZip free and bound to DNA.

Authors:  Linda Columbus; Wayne L Hubbell
Journal:  Biochemistry       Date:  2004-06-15       Impact factor: 3.162

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  27 in total

1.  Structure and dynamics of the force-generating domain of myosin probed by multifrequency electron paramagnetic resonance.

Authors:  Yuri E Nesmelov; Roman V Agafonov; Adam R Burr; Ralph T Weber; David D Thomas
Journal:  Biophys J       Date:  2008-03-13       Impact factor: 4.033

2.  Phospholamban oligomerization, quaternary structure, and sarco(endo)plasmic reticulum calcium ATPase binding measured by fluorescence resonance energy transfer in living cells.

Authors:  Eileen M Kelly; Zhanjia Hou; Julie Bossuyt; Donald M Bers; Seth L Robia
Journal:  J Biol Chem       Date:  2008-02-19       Impact factor: 5.157

3.  Rotational dynamics of HIV-1 nucleocapsid protein NCp7 as probed by a spin label attached by peptide synthesis.

Authors:  Zhiwen Zhang; Xiangmei Xi; Charles P Scholes; Christine B Karim
Journal:  Biopolymers       Date:  2008-12       Impact factor: 2.505

4.  Allosteric regulation of SERCA by phosphorylation-mediated conformational shift of phospholamban.

Authors:  Martin Gustavsson; Raffaello Verardi; Daniel G Mullen; Kaustubh R Mote; Nathaniel J Traaseth; T Gopinath; Gianluigi Veglia
Journal:  Proc Natl Acad Sci U S A       Date:  2013-10-07       Impact factor: 11.205

5.  Protein Rotational Dynamics in Aligned Lipid Membranes Probed by Anisotropic T NMR Relaxation.

Authors:  Emmanuel O Awosanya; Alexander A Nevzorov
Journal:  Biophys J       Date:  2018-01-23       Impact factor: 4.033

6.  Structure, dynamics, and ion conductance of the phospholamban pentamer.

Authors:  Christopher Maffeo; Aleksei Aksimentiev
Journal:  Biophys J       Date:  2009-06-17       Impact factor: 4.033

7.  Continuous wave W- and D-band EPR spectroscopy offer "sweet-spots" for characterizing conformational changes and dynamics in intrinsically disordered proteins.

Authors:  Thomas M Casey; Zhanglong Liu; Jackie M Esquiaqui; Natasha L Pirman; Eugene Milshteyn; Gail E Fanucci
Journal:  Biochem Biophys Res Commun       Date:  2014-06-17       Impact factor: 3.575

8.  Structure and dynamics of a conformationally constrained nitroxide side chain and applications in EPR spectroscopy.

Authors:  Mark R Fleissner; Michael D Bridges; Evan K Brooks; Duilio Cascio; Tamás Kálai; Kálmán Hideg; Wayne L Hubbell
Journal:  Proc Natl Acad Sci U S A       Date:  2011-09-12       Impact factor: 11.205

9.  Phospholamban phosphorylation, mutation, and structural dynamics: a biophysical approach to understanding and treating cardiomyopathy.

Authors:  Naa-Adjeley D Ablorh; David D Thomas
Journal:  Biophys Rev       Date:  2015-01-21

10.  Time-resolved FRET reveals the structural mechanism of SERCA-PLB regulation.

Authors:  Xiaoqiong Dong; David D Thomas
Journal:  Biochem Biophys Res Commun       Date:  2014-05-09       Impact factor: 3.575

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