| Literature DB >> 21523174 |
Fadila Berrah, Amira Ouakkaf, Sofiane Bouacida, Thierry Roisnel.
Abstract
In crystal structure of the title compound, C(5)H(6)N(3)O(2) (+)·NO(3) (-)·H(2)O, inter-molecular N-H⋯O, O-H⋯N and O-H⋯O hydrogen bonds link the cations, anions and water mol-ecules into ribbons extending in [10]. Weak inter-molecular C-H⋯O hydrogen bonds further link these ribbons into sheets parallel to (3).Entities:
Year: 2011 PMID: 21523174 PMCID: PMC3051481 DOI: 10.1107/S1600536811003126
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C5H6N3O2+·NO3−·H2O | |
| Triclinic, | |
| Mo | |
| Cell parameters from 2815 reflections | |
| θ = 2.8–27.5° | |
| α = 97.872 (3)° | µ = 0.15 mm−1 |
| β = 100.588 (3)° | |
| γ = 106.194 (3)° | Prism, yellow |
| 0.58 × 0.49 × 0.42 mm |
| Bruker APEXII diffractometer | 1693 reflections with |
| graphite | |
| CCD rotation images, thin slices scans | θmax = 27.5°, θmin = 2.8° |
| Absorption correction: multi-scan ( | |
| 5333 measured reflections | |
| 1967 independent reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 1967 reflections | (Δ/σ)max < 0.001 |
| 143 parameters | Δρmax = 0.36 e Å−3 |
| 0 restraints | Δρmin = −0.25 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| C1 | 0.3536 (3) | 0.81463 (18) | 0.56444 (11) | 0.0213 (3) | |
| C2 | 0.5373 (3) | 0.93343 (17) | 0.67594 (11) | 0.0196 (3) | |
| C3 | 0.5053 (3) | 1.11068 (18) | 0.71720 (11) | 0.0206 (3) | |
| C4 | 0.8826 (3) | 1.14836 (19) | 0.87398 (11) | 0.0243 (3) | |
| H4A | 1.0058 | 1.2218 | 0.9434 | 0.029* | |
| C5 | 0.9034 (3) | 0.97938 (19) | 0.83049 (11) | 0.0239 (3) | |
| H5 | 1.0420 | 0.9354 | 0.8702 | 0.029* | |
| N1 | 0.4633 (3) | 1.60420 (16) | 0.88650 (10) | 0.0226 (3) | |
| N2 | 0.3198 (3) | 1.18108 (16) | 0.66687 (11) | 0.0270 (3) | |
| H2A | 0.3137 | 1.2905 | 0.6980 | 0.032* | |
| H2B | 0.2019 | 1.1188 | 0.6021 | 0.032* | |
| N3 | 0.6850 (2) | 1.20958 (15) | 0.81712 (10) | 0.0228 (3) | |
| H3 | 0.6719 | 1.3181 | 0.8460 | 0.027* | |
| N4 | 0.7294 (2) | 0.87393 (15) | 0.73168 (9) | 0.0219 (3) | |
| O1 | 0.3992 (2) | 0.65591 (14) | 0.54062 (9) | 0.0303 (3) | |
| H1 | 0.3004 | 0.5977 | 0.4759 | 0.045* | |
| O2 | 0.1873 (2) | 0.86840 (14) | 0.50431 (9) | 0.0288 (3) | |
| O3 | 0.4414 (2) | 1.75010 (14) | 0.93506 (9) | 0.0326 (3) | |
| O4 | 0.6850 (2) | 1.56230 (14) | 0.91237 (9) | 0.0279 (3) | |
| O5 | 0.2640 (2) | 1.49165 (15) | 0.80957 (9) | 0.0337 (3) | |
| O1W | 0.8473 (3) | 0.53972 (18) | 0.65527 (11) | 0.0490 (4) | |
| H1W | 0.979 (6) | 0.543 (4) | 0.704 (3) | 0.074* | |
| H2W | 0.793 (6) | 0.637 (4) | 0.671 (2) | 0.074* |
| C1 | 0.0231 (6) | 0.0211 (6) | 0.0170 (6) | 0.0071 (5) | 0.0009 (5) | 0.0001 (5) |
| C2 | 0.0215 (6) | 0.0196 (6) | 0.0156 (6) | 0.0051 (5) | 0.0021 (5) | 0.0017 (5) |
| C3 | 0.0209 (6) | 0.0205 (6) | 0.0174 (6) | 0.0035 (5) | 0.0043 (5) | −0.0001 (5) |
| C4 | 0.0246 (7) | 0.0254 (7) | 0.0157 (6) | 0.0011 (5) | 0.0002 (5) | 0.0009 (5) |
| C5 | 0.0236 (7) | 0.0255 (7) | 0.0178 (6) | 0.0050 (5) | −0.0014 (5) | 0.0029 (5) |
| N1 | 0.0265 (6) | 0.0208 (5) | 0.0185 (6) | 0.0066 (5) | 0.0036 (5) | 0.0014 (4) |
| N2 | 0.0284 (6) | 0.0234 (6) | 0.0255 (6) | 0.0119 (5) | −0.0023 (5) | −0.0038 (5) |
| N3 | 0.0253 (6) | 0.0195 (5) | 0.0189 (6) | 0.0049 (5) | 0.0017 (5) | −0.0029 (4) |
| N4 | 0.0242 (6) | 0.0212 (5) | 0.0173 (6) | 0.0055 (5) | 0.0011 (4) | 0.0023 (4) |
| O1 | 0.0380 (6) | 0.0252 (5) | 0.0214 (5) | 0.0159 (4) | −0.0088 (4) | −0.0075 (4) |
| O2 | 0.0300 (5) | 0.0276 (5) | 0.0243 (5) | 0.0135 (4) | −0.0071 (4) | −0.0016 (4) |
| O3 | 0.0406 (6) | 0.0231 (5) | 0.0337 (6) | 0.0116 (5) | 0.0108 (5) | −0.0023 (4) |
| O4 | 0.0256 (5) | 0.0275 (5) | 0.0250 (5) | 0.0093 (4) | −0.0031 (4) | −0.0030 (4) |
| O1W | 0.0619 (9) | 0.0472 (7) | 0.0308 (6) | 0.0396 (7) | −0.0220 (6) | −0.0188 (5) |
| O5 | 0.0284 (6) | 0.0316 (6) | 0.0316 (6) | 0.0109 (4) | −0.0085 (4) | −0.0070 (4) |
| C1—O2 | 1.2162 (17) | C5—H5 | 0.9500 |
| C1—O1 | 1.3017 (16) | N1—O3 | 1.2314 (14) |
| C1—C2 | 1.5050 (18) | N1—O4 | 1.2621 (15) |
| C2—N4 | 1.3132 (17) | N1—O5 | 1.2635 (15) |
| C2—C3 | 1.4420 (17) | N2—H2A | 0.8800 |
| C3—N2 | 1.3150 (18) | N2—H2B | 0.8800 |
| C3—N3 | 1.3580 (17) | N3—H3 | 0.8800 |
| C4—N3 | 1.3488 (18) | O1—H1 | 0.8400 |
| C4—C5 | 1.3663 (19) | O1W—H1W | 0.81 (3) |
| C4—H4A | 0.9500 | O1W—H2W | 0.88 (3) |
| C5—N4 | 1.3520 (17) | ||
| O2—C1—O1 | 125.51 (12) | C4—C5—H5 | 119.6 |
| O2—C1—C2 | 121.65 (11) | O3—N1—O4 | 121.00 (12) |
| O1—C1—C2 | 112.82 (12) | O3—N1—O5 | 120.97 (12) |
| N4—C2—C3 | 121.68 (12) | O4—N1—O5 | 118.02 (11) |
| N4—C2—C1 | 118.46 (11) | C3—N2—H2A | 120.0 |
| C3—C2—C1 | 119.83 (12) | C3—N2—H2B | 120.0 |
| N2—C3—N3 | 118.84 (12) | H2A—N2—H2B | 120.0 |
| N2—C3—C2 | 125.70 (12) | C4—N3—C3 | 122.72 (11) |
| N3—C3—C2 | 115.46 (12) | C4—N3—H3 | 118.6 |
| N3—C4—C5 | 119.16 (12) | C3—N3—H3 | 118.6 |
| N3—C4—H4A | 120.4 | C2—N4—C5 | 120.09 (11) |
| C5—C4—H4A | 120.4 | C1—O1—H1 | 109.5 |
| N4—C5—C4 | 120.89 (13) | H1W—O1W—H2W | 110 (3) |
| N4—C5—H5 | 119.6 | ||
| O2—C1—C2—N4 | −174.02 (13) | N3—C4—C5—N4 | 0.1 (2) |
| O1—C1—C2—N4 | 4.43 (18) | C5—C4—N3—C3 | −0.5 (2) |
| O2—C1—C2—C3 | 4.1 (2) | N2—C3—N3—C4 | −179.55 (13) |
| O1—C1—C2—C3 | −177.47 (12) | C2—C3—N3—C4 | 0.68 (19) |
| N4—C2—C3—N2 | 179.80 (13) | C3—C2—N4—C5 | 0.1 (2) |
| C1—C2—C3—N2 | 1.8 (2) | C1—C2—N4—C5 | 178.13 (12) |
| N4—C2—C3—N3 | −0.45 (19) | C4—C5—N4—C2 | 0.1 (2) |
| C1—C2—C3—N3 | −178.48 (11) |
| H··· | ||||
| O1—H1···O1Wi | 0.84 | 1.69 | 2.5233 (17) | 168 |
| O1W—H1W···O5ii | 0.80 (3) | 1.93 (3) | 2.7152 (18) | 167 (3) |
| O1W—H2W···O1 | 0.88 (3) | 2.39 (3) | 2.8825 (19) | 116 (2) |
| O1W—H2W···N4 | 0.88 (3) | 1.99 (3) | 2.8566 (18) | 170 (2) |
| N2—H2A···O5 | 0.88 | 2.01 | 2.8549 (17) | 161 |
| N2—H2B···O2 | 0.88 | 2.08 | 2.7163 (17) | 128 |
| N2—H2B···O2iii | 0.88 | 2.20 | 2.9125 (18) | 137 |
| N3—H3···O4 | 0.88 | 1.91 | 2.7825 (16) | 174 |
| C4—H4A···O4iv | 0.95 | 2.24 | 3.1818 (17) | 169 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| O1—H1⋯O1 | 0.84 | 1.69 | 2.5233 (17) | 168 |
| O1 | 0.80 (3) | 1.93 (3) | 2.7152 (18) | 167 (3) |
| O1 | 0.88 (3) | 2.39 (3) | 2.8825 (19) | 116 (2) |
| O1 | 0.88 (3) | 1.99 (3) | 2.8566 (18) | 170 (2) |
| N2—H2 | 0.88 | 2.01 | 2.8549 (17) | 161 |
| N2—H2 | 0.88 | 2.08 | 2.7163 (17) | 128 |
| N2—H2 | 0.88 | 2.20 | 2.9125 (18) | 137 |
| N3—H3⋯O4 | 0.88 | 1.91 | 2.7825 (16) | 174 |
| C4—H4 | 0.95 | 2.24 | 3.1818 (17) | 169 |
Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .