Literature DB >> 22589972

5-Amino-3-carb-oxy-1H-1,2,4-triazol-4-ium nitrate monohydrate.

Fadila Berrah, Rafika Bouchene, Sofiane Bouacida, Thierry Roisnel.   

Abstract

The two-dimensional crystal packing of the title compound, C(3)H(5)N(4)O(2) (+)·NO(2) (-)·H(2)O, results from the stacking of well separated layers (i.e. with nothing between the layers) parallel to the (-113) plane in which adjacent cations adopt a head-to-head arrangement such that two -COOH groups are linked via two water mol-ecules (the water O atom behaves simultaneously as donor and acceptor of hydrogen bonds) and two -NH(2) groups are linked through two nitrate anions. This arrangement leads to alternating hydro-philic and hydro-phobic zones in which O-H⋯O and N-H⋯O hydrogen bonds, respectively, are observed.

Entities:  

Year:  2012        PMID: 22589972      PMCID: PMC3344063          DOI: 10.1107/S1600536812011154

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For properties of 1,2,4-triazoles, see: Ouakkaf et al. (2011 ▶). For related structures, see: Fernandes et al. (2011 ▶); Berrah et al. (2011a ▶,b ▶); Jebas et al. (2006 ▶).

Experimental

Crystal data

C3H5N4O2 +·NO3 −·H2O M = 209.14 Triclinic, a = 4.9934 (13) Å b = 6.7454 (17) Å c = 12.446 (3) Å α = 97.572 (12)° β = 100.524 (13)° γ = 98.933 (13)° V = 401.60 (18) Å3 Z = 2 Mo Kα radiation μ = 0.17 mm−1 T = 150 K 0.42 × 0.2 × 0.11 mm

Data collection

Bruker APEXII diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 2002 ▶) T min = 0.863, T max = 0.982 4012 measured reflections 1821 independent reflections 1563 reflections with I > 2σ(I) R int = 0.040

Refinement

R[F 2 > 2σ(F 2)] = 0.040 wR(F 2) = 0.109 S = 1.03 1821 reflections 134 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.35 e Å−3 Δρmin = −0.29 e Å−3 Data collection: APEX2 (Bruker, 2006 ▶); cell refinement: SAINT (Bruker, 2006 ▶); data reduction: SAINT; program(s) used to solve structure: SIR2002 (Burla et al., 2005 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997 ▶) and DIAMOND (Brandenburg & Berndt, 2001 ▶); software used to prepare material for publication: WinGX (Farrugia, 1999 ▶). Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536812011154/pv2522sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812011154/pv2522Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536812011154/pv2522Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C3H5N4O2+·NO3·H2OZ = 2
Mr = 209.14F(000) = 216
Triclinic, P1Dx = 1.729 Mg m3
a = 4.9934 (13) ÅMo Kα radiation, λ = 0.71073 Å
b = 6.7454 (17) ÅCell parameters from 1584 reflections
c = 12.446 (3) Åθ = 3.4–27.4°
α = 97.572 (12)°µ = 0.17 mm1
β = 100.524 (13)°T = 150 K
γ = 98.933 (13)°Stick, colourless
V = 401.60 (18) Å30.42 × 0.2 × 0.11 mm
Bruker APEXII diffractometer1563 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.040
CCD rotation images, thin slices scansθmax = 27.5°, θmin = 3.1°
Absorption correction: multi-scan (SADABS; Sheldrick, 2002)h = −6→6
Tmin = 0.863, Tmax = 0.982k = −6→8
4012 measured reflectionsl = −16→15
1821 independent reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.040Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.109H atoms treated by a mixture of independent and constrained refinement
S = 1.03w = 1/[σ2(Fo2) + (0.0535P)2 + 0.0973P] where P = (Fo2 + 2Fc2)/3
1821 reflections(Δ/σ)max < 0.001
134 parametersΔρmax = 0.35 e Å3
0 restraintsΔρmin = −0.29 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O1−0.1877 (2)−0.15602 (16)0.31865 (9)0.0218 (3)
N3−0.0716 (3)0.32704 (19)0.20042 (11)0.0174 (3)
O40.2001 (2)0.80430 (17)0.13489 (10)0.0241 (3)
O5−0.2192 (2)0.59982 (18)0.06811 (10)0.0234 (3)
H5−0.25050.68880.03110.035*
O1W−0.3752 (3)0.82557 (19)−0.06786 (10)0.0272 (3)
H2W−0.319 (5)0.946 (4)−0.0762 (18)0.041*
H1W−0.544 (5)0.791 (3)−0.1043 (19)0.041*
N50.5272 (3)0.2985 (2)0.39298 (11)0.0219 (3)
H5A0.49990.1850.41720.026*
H5B0.68290.38110.41620.026*
O2−0.0623 (2)−0.34292 (17)0.44188 (10)0.0284 (3)
O30.2143 (2)−0.06970 (17)0.43144 (10)0.0262 (3)
N20.3435 (2)0.51522 (18)0.27273 (10)0.0158 (3)
H20.48060.61540.28540.019*
N40.0781 (3)0.23345 (19)0.27646 (10)0.0167 (3)
H40.01760.11780.29370.02*
N1−0.0104 (3)−0.18948 (19)0.39831 (10)0.0171 (3)
C30.3308 (3)0.3458 (2)0.32034 (12)0.0155 (3)
C20.0952 (3)0.4958 (2)0.20038 (12)0.0165 (3)
C10.0296 (3)0.6523 (2)0.12995 (13)0.0175 (3)
U11U22U33U12U13U23
O10.0199 (5)0.0212 (6)0.0216 (6)0.0009 (4)−0.0034 (4)0.0088 (5)
N30.0166 (6)0.0160 (6)0.0191 (7)0.0023 (5)−0.0004 (5)0.0077 (5)
O40.0237 (6)0.0185 (6)0.0289 (6)−0.0007 (5)0.0009 (5)0.0109 (5)
O50.0219 (6)0.0198 (6)0.0261 (6)0.0013 (5)−0.0043 (5)0.0114 (5)
O1W0.0219 (6)0.0221 (6)0.0343 (7)−0.0020 (5)−0.0057 (5)0.0159 (5)
N50.0150 (6)0.0186 (7)0.0293 (8)−0.0034 (5)−0.0034 (5)0.0123 (6)
O20.0274 (6)0.0189 (6)0.0339 (7)−0.0075 (5)−0.0047 (5)0.0156 (5)
O30.0183 (6)0.0212 (6)0.0334 (7)−0.0073 (5)−0.0039 (5)0.0105 (5)
N20.0135 (6)0.0134 (6)0.0190 (6)−0.0007 (5)0.0002 (5)0.0060 (5)
N40.0149 (6)0.0150 (6)0.0195 (6)0.0004 (5)−0.0011 (5)0.0095 (5)
N10.0166 (6)0.0139 (6)0.0195 (7)−0.0002 (5)0.0015 (5)0.0047 (5)
C30.0153 (7)0.0134 (7)0.0177 (7)0.0016 (5)0.0023 (6)0.0045 (6)
C20.0151 (7)0.0153 (7)0.0182 (7)0.0021 (5)0.0008 (6)0.0042 (6)
C10.0201 (7)0.0136 (7)0.0187 (7)0.0022 (6)0.0031 (6)0.0053 (6)
O1—N11.2720 (16)N5—H5B0.86
N3—C21.3023 (19)O2—N11.2443 (16)
N3—N41.3779 (18)O3—N11.2426 (16)
O4—C11.2139 (18)N2—C31.3529 (19)
O5—C11.3051 (19)N2—C21.3698 (19)
O5—H50.82N2—H20.86
O1W—H2W0.84 (3)N4—C31.3443 (18)
O1W—H1W0.86 (2)N4—H40.86
N5—C31.3155 (19)C2—C11.495 (2)
N5—H5A0.86
C2—N3—N4103.98 (12)O3—N1—O2120.44 (13)
C1—O5—H5109.5O3—N1—O1119.79 (12)
H2W—O1W—H1W107 (2)O2—N1—O1119.77 (12)
C3—N5—H5A120N5—C3—N4126.95 (13)
C3—N5—H5B120N5—C3—N2127.13 (13)
H5A—N5—H5B120N4—C3—N2105.91 (12)
C3—N2—C2106.57 (12)N3—C2—N2112.16 (13)
C3—N2—H2126.7N3—C2—C1124.96 (14)
C2—N2—H2126.7N2—C2—C1122.89 (13)
C3—N4—N3111.38 (12)O4—C1—O5128.33 (15)
C3—N4—H4124.3O4—C1—C2120.16 (14)
N3—N4—H4124.3O5—C1—C2111.50 (13)
C2—N3—N4—C3−0.23 (16)C3—N2—C2—N30.52 (17)
N3—N4—C3—N5−178.18 (15)C3—N2—C2—C1−179.10 (13)
N3—N4—C3—N20.55 (16)N3—C2—C1—O4−179.23 (15)
C2—N2—C3—N5178.10 (15)N2—C2—C1—O40.3 (2)
C2—N2—C3—N4−0.62 (15)N3—C2—C1—O50.5 (2)
N4—N3—C2—N2−0.18 (16)N2—C2—C1—O5−179.93 (13)
N4—N3—C2—C1179.43 (14)
D—H···AD—HH···AD···AD—H···A
O5—H5···O1W0.821.722.5210 (17)166
O1W—H2W···O4i0.84 (3)1.97 (3)2.7985 (18)166 (2)
O1W—H1W···N3ii0.86 (2)2.05 (3)2.9011 (19)172 (2)
N5—H5A···O30.862.12.8672 (18)148
N5—H5A···O3iii0.862.443.0498 (19)129
N5—H5B···O2iv0.862.042.8352 (18)154
N5—H5B···O2iii0.862.413.0060 (18)127
N2—H2···O1iv0.862.022.8790 (17)178
N4—H4···O10.862.062.9112 (18)171
N4—H4···O30.862.423.0590 (18)132
N4—H4···N10.862.593.4099 (19)160
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O5—H5⋯O1W0.821.722.5210 (17)166
O1W—H2W⋯O4i0.84 (3)1.97 (3)2.7985 (18)166 (2)
O1W—H1W⋯N3ii0.86 (2)2.05 (3)2.9011 (19)172 (2)
N5—H5B⋯O2iii0.862.042.8352 (18)154
N2—H2⋯O1iii0.862.022.8790 (17)178
N4—H4⋯O10.862.062.9112 (18)171

Symmetry codes: (i) ; (ii) ; (iii) .

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