| Literature DB >> 22590365 |
Rafika Bouchene, Sofiane Bouacida, Fadila Berrah, Jean-Claude Daran.
Abstract
The asymmetric unit of the title compound, C(6)H(7)N(2)O(2) (+)·Cl(-)·0.5H(2)O, consists of two protonated 2-amino-3-carb-oxy-pyridine cations, two chloride anions and one mol-ecule of water. The crystal packing can be described as alternating layers of cations and anions parallel to (110), which are linked together by O(w)-H⋯Cl inter-actions. In the crystal, four types of classical hydrogen bonds are observed, viz. cation-anion (O-H⋯Cl and N-H⋯Cl), cation-cation (N-H⋯O), cation-water (N-H⋯O(w)) and water-anion (O(w)-H⋯Cl), resulting in the formation of an infinite three-dimensional network.Entities:
Year: 2012 PMID: 22590365 PMCID: PMC3344603 DOI: 10.1107/S1600536812017230
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C6H7N2O2+·Cl−·0.5H2O | |
| Triclinic, | |
| Mo | |
| Cell parameters from 8921 reflections | |
| θ = 3.0–28.3° | |
| α = 81.392 (4)° | µ = 0.45 mm−1 |
| β = 81.276 (3)° | |
| γ = 81.682 (4)° | Box, colourless |
| 0.1 × 0.08 × 0.06 mm |
| Agilent Xcalibur Sapphire1 long-nozzle diffractometer | 3600 independent reflections |
| Radiation source: fine-focus sealed tube | 2857 reflections with |
| Graphite monochromator | |
| Detector resolution: 8.2632 pixels mm-1 | θmax = 28.4°, θmin = 3.0° |
| ω scans | |
| Absorption correction: multi-scan ( | |
| 14449 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 3600 reflections | (Δ/σ)max = 0.006 |
| 214 parameters | Δρmax = 0.26 e Å−3 |
| 3 restraints | Δρmin = −0.28 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| N3A | −0.02482 (16) | 0.24894 (14) | 0.18532 (11) | 0.0277 (3) | |
| H3A1 | −0.0772 | 0.2962 | 0.2448 | 0.033* | |
| H3A2 | −0.0497 | 0.2761 | 0.1114 | 0.033* | |
| N3B | 0.13489 (17) | 0.59931 (14) | 0.23112 (12) | 0.0291 (3) | |
| H3B1 | 0.0857 | 0.6432 | 0.2933 | 0.035* | |
| H3B2 | 0.1053 | 0.6298 | 0.1588 | 0.035* | |
| O1W | 0.33167 (15) | 0.38876 (12) | 0.72134 (10) | 0.0306 (2) | |
| H1W | 0.287 (2) | 0.3146 (14) | 0.7070 (17) | 0.046* | |
| H2W | 0.280 (2) | 0.4650 (14) | 0.6834 (16) | 0.046* | |
| Cl1 | 0.19706 (5) | 0.11808 (4) | 0.64870 (3) | 0.03012 (11) | |
| Cl2 | 0.14081 (5) | 0.65043 (4) | 0.55111 (3) | 0.03071 (11) | |
| O1A | 0.05136 (14) | 0.18895 (12) | −0.04721 (9) | 0.0301 (2) | |
| O2A | 0.26652 (14) | 0.01182 (12) | −0.09112 (9) | 0.0287 (2) | |
| H2A | 0.2445 | 0.0392 | −0.1619 | 0.043* | |
| O1B | 0.20803 (14) | 0.54951 (12) | −0.00916 (10) | 0.0333 (3) | |
| N4A | 0.12830 (15) | 0.09603 (13) | 0.32534 (10) | 0.0220 (2) | |
| H4A | 0.074 | 0.1486 | 0.3809 | 0.026* | |
| N4B | 0.29795 (16) | 0.44117 (14) | 0.36162 (11) | 0.0259 (3) | |
| H4B | 0.2425 | 0.488 | 0.4204 | 0.031* | |
| C2B | 0.34601 (17) | 0.40270 (14) | 0.15203 (12) | 0.0193 (3) | |
| C2A | 0.19059 (17) | 0.05053 (15) | 0.11658 (12) | 0.0196 (3) | |
| C3A | 0.09315 (17) | 0.13510 (15) | 0.20751 (12) | 0.0201 (3) | |
| C5A | 0.24283 (19) | −0.01981 (16) | 0.36061 (13) | 0.0256 (3) | |
| H5A | 0.2593 | −0.0421 | 0.4434 | 0.031* | |
| C7A | 0.30817 (19) | −0.06680 (16) | 0.15319 (13) | 0.0238 (3) | |
| H7A | 0.372 | −0.1227 | 0.0942 | 0.029* | |
| C1A | 0.16107 (18) | 0.09171 (15) | −0.01399 (12) | 0.0210 (3) | |
| O2B | 0.38993 (13) | 0.34859 (11) | −0.05118 (9) | 0.0272 (2) | |
| H2B | 0.3638 | 0.3747 | −0.1211 | 0.041* | |
| C1B | 0.30608 (17) | 0.44226 (15) | 0.02359 (12) | 0.0209 (3) | |
| C7B | 0.47068 (18) | 0.28766 (16) | 0.18251 (13) | 0.0227 (3) | |
| H7B | 0.5304 | 0.2339 | 0.1208 | 0.027* | |
| C3B | 0.25557 (18) | 0.48538 (15) | 0.24663 (13) | 0.0218 (3) | |
| C5B | 0.4206 (2) | 0.32921 (17) | 0.39066 (14) | 0.0279 (3) | |
| H5B | 0.4441 | 0.3064 | 0.4719 | 0.033* | |
| C6B | 0.51055 (19) | 0.24892 (17) | 0.30269 (13) | 0.0264 (3) | |
| H6B | 0.5956 | 0.171 | 0.322 | 0.032* | |
| C6A | 0.3345 (2) | −0.10448 (17) | 0.27672 (14) | 0.0281 (3) | |
| H6A | 0.413 | −0.1856 | 0.3008 | 0.034* |
| N3A | 0.0289 (7) | 0.0298 (7) | 0.0217 (6) | 0.0094 (6) | −0.0026 (5) | −0.0084 (5) |
| N3B | 0.0302 (7) | 0.0268 (6) | 0.0280 (7) | 0.0051 (6) | −0.0008 (5) | −0.0080 (5) |
| O1W | 0.0410 (7) | 0.0254 (6) | 0.0259 (5) | 0.0005 (5) | −0.0104 (5) | −0.0036 (4) |
| Cl1 | 0.0377 (2) | 0.0322 (2) | 0.02155 (18) | −0.00542 (16) | −0.00607 (15) | −0.00379 (14) |
| Cl2 | 0.0382 (2) | 0.0302 (2) | 0.02172 (18) | 0.00677 (16) | −0.00392 (15) | −0.00771 (14) |
| O1A | 0.0310 (6) | 0.0335 (6) | 0.0227 (5) | 0.0100 (5) | −0.0058 (4) | −0.0049 (4) |
| O2A | 0.0349 (6) | 0.0301 (6) | 0.0179 (5) | 0.0084 (5) | −0.0028 (4) | −0.0059 (4) |
| O1B | 0.0351 (6) | 0.0326 (6) | 0.0278 (6) | 0.0113 (5) | −0.0065 (5) | −0.0024 (4) |
| N4A | 0.0249 (6) | 0.0228 (6) | 0.0185 (5) | −0.0021 (5) | −0.0001 (5) | −0.0062 (4) |
| N4B | 0.0261 (6) | 0.0306 (7) | 0.0208 (6) | −0.0008 (5) | 0.0008 (5) | −0.0093 (5) |
| C2B | 0.0190 (6) | 0.0178 (6) | 0.0209 (6) | −0.0034 (5) | −0.0004 (5) | −0.0032 (5) |
| C2A | 0.0190 (7) | 0.0188 (6) | 0.0209 (7) | −0.0021 (5) | −0.0015 (5) | −0.0042 (5) |
| C3A | 0.0193 (7) | 0.0216 (7) | 0.0197 (6) | −0.0041 (5) | −0.0017 (5) | −0.0033 (5) |
| C5A | 0.0304 (8) | 0.0265 (7) | 0.0202 (7) | −0.0028 (6) | −0.0061 (6) | −0.0014 (6) |
| C7A | 0.0250 (7) | 0.0223 (7) | 0.0232 (7) | 0.0005 (6) | −0.0013 (6) | −0.0055 (5) |
| C1A | 0.0211 (7) | 0.0212 (7) | 0.0204 (7) | −0.0028 (6) | −0.0003 (5) | −0.0045 (5) |
| O2B | 0.0330 (6) | 0.0277 (5) | 0.0197 (5) | 0.0050 (5) | −0.0058 (4) | −0.0058 (4) |
| C1B | 0.0191 (7) | 0.0204 (7) | 0.0225 (7) | −0.0017 (6) | −0.0007 (5) | −0.0039 (5) |
| C7B | 0.0224 (7) | 0.0227 (7) | 0.0232 (7) | −0.0025 (6) | −0.0009 (6) | −0.0058 (5) |
| C3B | 0.0201 (7) | 0.0217 (7) | 0.0239 (7) | −0.0049 (6) | −0.0005 (5) | −0.0043 (5) |
| C5B | 0.0284 (8) | 0.0344 (8) | 0.0210 (7) | −0.0043 (7) | −0.0050 (6) | −0.0024 (6) |
| C6B | 0.0247 (7) | 0.0269 (7) | 0.0264 (7) | 0.0007 (6) | −0.0059 (6) | −0.0013 (6) |
| C6A | 0.0300 (8) | 0.0249 (7) | 0.0273 (7) | 0.0049 (6) | −0.0070 (6) | −0.0018 (6) |
| N3A—C3A | 1.3143 (18) | C2B—C7B | 1.3738 (19) |
| N3A—H3A1 | 0.86 | C2B—C3B | 1.4236 (19) |
| N3A—H3A2 | 0.86 | C2B—C1B | 1.4785 (18) |
| N3B—C3B | 1.3172 (18) | C2A—C7A | 1.3695 (19) |
| N3B—H3B1 | 0.86 | C2A—C3A | 1.4227 (19) |
| N3B—H3B2 | 0.86 | C2A—C1A | 1.4778 (18) |
| O1W—H1W | 0.854 (9) | C5A—C6A | 1.353 (2) |
| O1W—H2W | 0.843 (9) | C5A—H5A | 0.93 |
| O1A—C1A | 1.2058 (17) | C7A—C6A | 1.394 (2) |
| O2A—C1A | 1.3221 (16) | C7A—H7A | 0.93 |
| O2A—H2A | 0.82 | O2B—C1B | 1.3179 (16) |
| O1B—C1B | 1.2058 (17) | O2B—H2B | 0.82 |
| N4A—C5A | 1.3420 (18) | C7B—C6B | 1.3911 (19) |
| N4A—C3A | 1.3548 (17) | C7B—H7B | 0.93 |
| N4A—H4A | 0.86 | C5B—C6B | 1.357 (2) |
| N4B—C5B | 1.342 (2) | C5B—H5B | 0.93 |
| N4B—C3B | 1.3491 (18) | C6B—H6B | 0.93 |
| N4B—H4B | 0.86 | C6A—H6A | 0.93 |
| C3A—N3A—H3A1 | 120 | C2A—C7A—C6A | 121.60 (13) |
| C3A—N3A—H3A2 | 120 | C2A—C7A—H7A | 119.2 |
| H3A1—N3A—H3A2 | 120 | C6A—C7A—H7A | 119.2 |
| C3B—N3B—H3B1 | 120 | O1A—C1A—O2A | 123.10 (12) |
| C3B—N3B—H3B2 | 120 | O1A—C1A—C2A | 123.28 (12) |
| H3B1—N3B—H3B2 | 120 | O2A—C1A—C2A | 113.62 (12) |
| H1W—O1W—H2W | 106.3 (15) | C1B—O2B—H2B | 109.5 |
| C1A—O2A—H2A | 109.5 | O1B—C1B—O2B | 123.72 (13) |
| C5A—N4A—C3A | 123.91 (12) | O1B—C1B—C2B | 123.43 (12) |
| C5A—N4A—H4A | 118 | O2B—C1B—C2B | 112.84 (12) |
| C3A—N4A—H4A | 118 | C2B—C7B—C6B | 122.19 (13) |
| C5B—N4B—C3B | 124.58 (13) | C2B—C7B—H7B | 118.9 |
| C5B—N4B—H4B | 117.7 | C6B—C7B—H7B | 118.9 |
| C3B—N4B—H4B | 117.7 | N3B—C3B—N4B | 118.05 (13) |
| C7B—C2B—C3B | 118.77 (12) | N3B—C3B—C2B | 125.61 (13) |
| C7B—C2B—C1B | 121.29 (12) | N4B—C3B—C2B | 116.33 (13) |
| C3B—C2B—C1B | 119.94 (12) | N4B—C5B—C6B | 120.70 (13) |
| C7A—C2A—C3A | 118.82 (12) | N4B—C5B—H5B | 119.7 |
| C7A—C2A—C1A | 122.21 (12) | C6B—C5B—H5B | 119.7 |
| C3A—C2A—C1A | 118.96 (12) | C5B—C6B—C7B | 117.41 (14) |
| N3A—C3A—N4A | 118.07 (12) | C5B—C6B—H6B | 121.3 |
| N3A—C3A—C2A | 125.06 (12) | C7B—C6B—H6B | 121.3 |
| N4A—C3A—C2A | 116.85 (12) | C5A—C6A—C7A | 118.20 (14) |
| N4A—C5A—C6A | 120.56 (13) | C5A—C6A—H6A | 120.9 |
| N4A—C5A—H5A | 119.7 | C7A—C6A—H6A | 120.9 |
| C6A—C5A—H5A | 119.7 | ||
| C5A—N4A—C3A—N3A | 178.44 (13) | C7B—C2B—C1B—O2B | 5.75 (18) |
| C5A—N4A—C3A—C2A | −2.8 (2) | C3B—C2B—C1B—O2B | −174.82 (12) |
| C7A—C2A—C3A—N3A | −179.18 (14) | C3B—C2B—C7B—C6B | 0.4 (2) |
| C1A—C2A—C3A—N3A | 0.5 (2) | C1B—C2B—C7B—C6B | 179.82 (13) |
| C7A—C2A—C3A—N4A | 2.20 (19) | C5B—N4B—C3B—N3B | −178.55 (13) |
| C1A—C2A—C3A—N4A | −178.08 (12) | C5B—N4B—C3B—C2B | 1.8 (2) |
| C3A—N4A—C5A—C6A | 1.4 (2) | C7B—C2B—C3B—N3B | 179.06 (13) |
| C3A—C2A—C7A—C6A | −0.2 (2) | C1B—C2B—C3B—N3B | −0.4 (2) |
| C1A—C2A—C7A—C6A | −179.93 (14) | C7B—C2B—C3B—N4B | −1.36 (19) |
| C7A—C2A—C1A—O1A | 175.54 (13) | C1B—C2B—C3B—N4B | 179.19 (12) |
| C3A—C2A—C1A—O1A | −4.2 (2) | C3B—N4B—C5B—C6B | −1.3 (2) |
| C7A—C2A—C1A—O2A | −4.50 (19) | N4B—C5B—C6B—C7B | 0.1 (2) |
| C3A—C2A—C1A—O2A | 175.79 (12) | C2B—C7B—C6B—C5B | 0.3 (2) |
| C7B—C2B—C1B—O1B | −173.77 (14) | N4A—C5A—C6A—C7A | 0.8 (2) |
| C3B—C2B—C1B—O1B | 5.7 (2) | C2A—C7A—C6A—C5A | −1.3 (2) |
| H··· | ||||
| O1 | 0.85 (1) | 2.24 (1) | 3.0887 (12) | 173 (2) |
| O1 | 0.84 (2) | 2.33 (2) | 3.1639 (12) | 170 (2) |
| O2 | 0.82 | 2.18 | 2.9948 (11) | 177 |
| O2 | 0.82 | 1.78 | 2.5818 (15) | 166 |
| N3 | 0.86 | 2.10 | 2.7176 (17) | 128 |
| N3 | 0.86 | 2.25 | 2.9903 (17) | 144 |
| N3 | 0.86 | 2.04 | 2.6644 (16) | 129 |
| N3 | 0.86 | 2.17 | 2.8781 (17) | 140 |
| N3 | 0.86 | 2.34 | 3.1447 (13) | 156 |
| N4 | 0.86 | 2.44 | 3.2265 (12) | 152 |
| N4 | 0.86 | 2.21 | 3.0510 (13) | 166 |
| C5 | 0.93 | 2.82 | 3.5417 (15) | 135 |
| C6 | 0.93 | 2.55 | 3.427 (2) | 158 |
| C7 | 0.93 | 2.42 | 2.7397 (17) | 100 |
| C7 | 0.93 | 2.37 | 2.7065 (17) | 101 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| O1 | 0.85 (1) | 2.24 (1) | 3.0887 (12) | 173 (2) |
| O1 | 0.84 (2) | 2.33 (2) | 3.1639 (12) | 170 (2) |
| O2 | 0.82 | 2.18 | 2.9948 (11) | 177 |
| O2 | 0.82 | 1.78 | 2.5818 (15) | 166 |
| N3 | 0.86 | 2.10 | 2.7176 (17) | 128 |
| N3 | 0.86 | 2.25 | 2.9903 (17) | 144 |
| N3 | 0.86 | 2.04 | 2.6644 (16) | 129 |
| N3 | 0.86 | 2.17 | 2.8781 (17) | 140 |
| N3 | 0.86 | 2.34 | 3.1447 (13) | 156 |
| N4 | 0.86 | 2.44 | 3.2265 (12) | 152 |
| N4 | 0.86 | 2.21 | 3.0510 (13) | 166 |
Symmetry codes: (i) ; (ii) ; (iii) .