Literature DB >> 21482162

Frequency-selective heteronuclear dephasing and selective carbonyl labeling to deconvolute crowded spectra of membrane proteins by magic angle spinning NMR.

Nathaniel J Traaseth1, Gianluigi Veglia.   

Abstract

We present a new method that combines n class="Chemical">carbonn>yl-selective labeling with frequency-selective heteronuclear recoupling to resolve the spectral overlap of magic angle spinning (MAS) NMR spectra of membrane proteins in fluid lipid membranes with broad lines and high redundancy in the primary sequence. We implemented this approach in both heteronuclear (15)N-(13)C(α) and homonuclear (13)C-(13)C dipolar assisted rotational resonance (DARR) correlation experiments. We demonstrate its efficacy for the membrane protein phospholamban reconstituted in fluid PC/PE/PA lipid bilayers. The main advantage of this method is to discriminate overlapped (13)C(α) resonances by strategically labeling the preceding residue. This method is highly complementary to (13)C(i-1)(')-(15)N(i)-(13)C(i)(α) and (13)C(i-1)(α)-(15)N(i-1)-(13)C(i)(') experiments to distinguish inter-residue spin systems at a minimal cost to signal-to-noise.
Copyright © 2011 Elsevier Inc. All rights reserved.

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Year:  2011        PMID: 21482162      PMCID: PMC3328402          DOI: 10.1016/j.jmr.2011.03.013

Source DB:  PubMed          Journal:  J Magn Reson        ISSN: 1090-7807            Impact factor:   2.229


  70 in total

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Authors:  Lei Huang; Ann E McDermott
Journal:  Biochim Biophys Acta       Date:  2008-01-26

6.  Assignment strategies for large proteins by magic-angle spinning NMR: the 21-kDa disulfide-bond-forming enzyme DsbA.

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9.  1H, 13C and 15N chemical shift referencing in biomolecular NMR.

Authors:  D S Wishart; C G Bigam; J Yao; F Abildgaard; H J Dyson; E Oldfield; J L Markley; B D Sykes
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  9 in total

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2.  Nano-mole scale sequential signal assignment by (1)H-detected protein solid-state NMR.

Authors:  Songlin Wang; Sudhakar Parthasarathy; Yiling Xiao; Yusuke Nishiyama; Fei Long; Isamu Matsuda; Yuki Endo; Takahiro Nemoto; Kazuo Yamauchi; Tetsuo Asakura; Mitsuhiro Takeda; Tsutomu Terauchi; Masatsune Kainosho; Yoshitaka Ishii
Journal:  Chem Commun (Camb)       Date:  2015-08-28       Impact factor: 6.222

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4.  De novo resonance assignment of the transmembrane domain of LR11/SorLA in E. coli membranes.

Authors:  Xiaoyan Ding; Riqiang Fu; Fang Tian
Journal:  J Magn Reson       Date:  2019-11-01       Impact factor: 2.229

5.  Combination of ¹⁵N reverse labeling and afterglow spectroscopy for assigning membrane protein spectra by magic-angle-spinning solid-state NMR: application to the multidrug resistance protein EmrE.

Authors:  James R Banigan; Anindita Gayen; Nathaniel J Traaseth
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Review 6.  Isotope labeling for solution and solid-state NMR spectroscopy of membrane proteins.

Authors:  Raffaello Verardi; Nathaniel J Traaseth; Larry R Masterson; Vitaly V Vostrikov; Gianluigi Veglia
Journal:  Adv Exp Med Biol       Date:  2012       Impact factor: 2.622

7.  Identifying inter-residue resonances in crowded 2D (13)C- (13)C chemical shift correlation spectra of membrane proteins by solid-state MAS NMR difference spectroscopy.

Authors:  Yimin Miao; Timothy A Cross; Riqiang Fu
Journal:  J Biomol NMR       Date:  2013-05-25       Impact factor: 2.835

8.  Site-specific resolution of anionic residues in proteins using solid-state NMR spectroscopy.

Authors:  Jianping Li; Ampon Sae Her; Nathaniel J Traaseth
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9.  Utilizing afterglow magnetization from cross-polarization magic-angle-spinning solid-state NMR spectroscopy to obtain simultaneous heteronuclear multidimensional spectra.

Authors:  James R Banigan; Nathaniel J Traaseth
Journal:  J Phys Chem B       Date:  2012-05-31       Impact factor: 2.991

  9 in total

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