Literature DB >> 21216580

Epigenetic regulation of antigen receptor gene rearrangement.

Ann J Feeney1.   

Abstract

Recent studies of the regulation of antigen receptor rearrangement have revealed several completely new levels of control. Not only do antigen receptor loci undergo changes in histone modifications as they become accessible for recombination, but also the number of different histone modifications and the variation at different parts of each receptor locus reveal great complexity. RAG2 is now known to bind to one of these histone modifications, H3K4me3, and this targets the initial RAG binding events to the J genes. The large megabase receptor loci undergo 3D changes in their structure during rearrangement, and receptor loci move throughout the nucleus, transiently binding to heterochromatin, and transiently pairing with each other. RAG-mediated DNA breaks promote some of these movements, and also result in widespread changes in the transcriptional profile promoting differentiation.
Copyright © 2010 Elsevier Ltd. All rights reserved.

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Year:  2011        PMID: 21216580      PMCID: PMC3073619          DOI: 10.1016/j.coi.2010.12.008

Source DB:  PubMed          Journal:  Curr Opin Immunol        ISSN: 0952-7915            Impact factor:   7.486


  51 in total

1.  A role for histone acetylation in the developmental regulation of VDJ recombination.

Authors:  M T McMurry; M S Krangel
Journal:  Science       Date:  2000-01-21       Impact factor: 47.728

2.  Subnuclear compartmentalization of immunoglobulin loci during lymphocyte development.

Authors:  Steven T Kosak; Jane A Skok; Kay L Medina; Roy Riblet; Michelle M Le Beau; Amanda G Fisher; Harinder Singh
Journal:  Science       Date:  2002-04-05       Impact factor: 47.728

3.  The RAG1 N-terminal domain is an E3 ubiquitin ligase.

Authors:  Vyacheslav Yurchenko; Zhu Xue; Moshe Sadofsky
Journal:  Genes Dev       Date:  2003-03-01       Impact factor: 11.361

4.  Changes in histone acetylation are associated with differences in accessibility of V(H) gene segments to V-DJ recombination during B-cell ontogeny and development.

Authors:  Kristen Johnson; Cristina Angelin-Duclos; Sinae Park; Kathryn L Calame
Journal:  Mol Cell Biol       Date:  2003-04       Impact factor: 4.272

5.  Antisense intergenic transcription in V(D)J recombination.

Authors:  Daniel J Bolland; Andrew L Wood; Colette M Johnston; Sam F Bunting; Geoff Morgan; Lyubomira Chakalova; Peter J Fraser; Anne E Corcoran
Journal:  Nat Immunol       Date:  2004-04-25       Impact factor: 25.606

6.  Stepwise activation of the immunoglobulin mu heavy chain gene locus.

Authors:  D Chowdhury; R Sen
Journal:  EMBO J       Date:  2001-11-15       Impact factor: 11.598

7.  Pax5 induces V-to-DJ rearrangements and locus contraction of the immunoglobulin heavy-chain gene.

Authors:  Martin Fuxa; Jane Skok; Abdallah Souabni; Giorgia Salvagiotto; Esther Roldan; Meinrad Busslinger
Journal:  Genes Dev       Date:  2004-02-15       Impact factor: 11.361

8.  Antigen receptor loci poised for V(D)J rearrangement are broadly associated with BRG1 and flanked by peaks of histone H3 dimethylated at lysine 4.

Authors:  Katrina B Morshead; David N Ciccone; Sean D Taverna; C David Allis; Marjorie A Oettinger
Journal:  Proc Natl Acad Sci U S A       Date:  2003-09-19       Impact factor: 11.205

Review 9.  Beyond the double helix: writing and reading the histone code.

Authors:  Yanming Wang; Wolfgang Fischle; Wang Cheung; Steven Jacobs; Sepideh Khorasanizadeh; C David Allis
Journal:  Novartis Found Symp       Date:  2004

10.  Ezh2 controls B cell development through histone H3 methylation and Igh rearrangement.

Authors:  I-Hsin Su; Ashwin Basavaraj; Andrew N Krutchinsky; Oliver Hobert; Axel Ullrich; Brian T Chait; Alexander Tarakhovsky
Journal:  Nat Immunol       Date:  2002-12-23       Impact factor: 25.606

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  9 in total

Review 1.  Determinants of public T cell responses.

Authors:  Hanjie Li; Congting Ye; Guoli Ji; Jiahuai Han
Journal:  Cell Res       Date:  2012-01-03       Impact factor: 25.617

Review 2.  Histone methylation and V(D)J recombination.

Authors:  Noriko Shimazaki; Michael R Lieber
Journal:  Int J Hematol       Date:  2014-07-25       Impact factor: 2.490

Review 3.  RNA Exosome and Non-coding RNA-Coupled Mechanisms in AID-Mediated Genomic Alterations.

Authors:  Brice Laffleur; Uttiya Basu; Junghyun Lim
Journal:  J Mol Biol       Date:  2017-01-07       Impact factor: 5.469

4.  The multiple shark Ig H chain genes rearrange and hypermutate autonomously.

Authors:  Catherine Zhu; Wendy Feng; Jeremy Weedon; Pauline Hua; Dimitre Stefanov; Yuko Ohta; Martin F Flajnik; Ellen Hsu
Journal:  J Immunol       Date:  2011-07-29       Impact factor: 5.422

Review 5.  The origin of recurrent translocations in recombining lymphocytes: a balance between break frequency and nuclear proximity.

Authors:  Pedro P Rocha; Jane A Skok
Journal:  Curr Opin Cell Biol       Date:  2013-03-13       Impact factor: 8.382

Review 6.  Stochastic gene expression in mammals: lessons from olfaction.

Authors:  Angeliki Magklara; Stavros Lomvardas
Journal:  Trends Cell Biol       Date:  2013-05-18       Impact factor: 20.808

7.  Immunoglobulin analysis tool: a novel tool for the analysis of human and mouse heavy and light chain transcripts.

Authors:  Tobias Rogosch; Sebastian Kerzel; Kam Hon Hoi; Zhixin Zhang; Rolf F Maier; Gregory C Ippolito; Michael Zemlin
Journal:  Front Immunol       Date:  2012-06-28       Impact factor: 7.561

8.  Chromatin computation.

Authors:  Barbara Bryant
Journal:  PLoS One       Date:  2012-05-02       Impact factor: 3.240

9.  Pre-B cell receptor signaling induces immunoglobulin κ locus accessibility by functional redistribution of enhancer-mediated chromatin interactions.

Authors:  Ralph Stadhouders; Marjolein J W de Bruijn; Magdalena B Rother; Saravanan Yuvaraj; Claudia Ribeiro de Almeida; Petros Kolovos; Menno C Van Zelm; Wilfred van Ijcken; Frank Grosveld; Eric Soler; Rudi W Hendriks
Journal:  PLoS Biol       Date:  2014-02-18       Impact factor: 8.029

  9 in total

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