Literature DB >> 12640127

Changes in histone acetylation are associated with differences in accessibility of V(H) gene segments to V-DJ recombination during B-cell ontogeny and development.

Kristen Johnson1, Cristina Angelin-Duclos, Sinae Park, Kathryn L Calame.   

Abstract

Although V(D)J recombination is thought to be regulated by changes in the accessibility of chromatin to the recombinase machinery, the mechanisms responsible for establishing "open" chromatin are poorly understood. We performed a detailed study of the acetylation status of histones associated with 11 V(H) gene segments, their flanking regions, and various intergenic elements during B-cell development and ontogeny, when V(D)J recombination is highly regulated. Histone H4 shows higher and more-regulated acetylation than does histone H3 in the V(H) locus. In adult pro-B cells, V(H) gene segments are acetylated prior to V(D)J rearrangement, with higher acetylation associated with J(H)-distal V(H) gene segments. While large regions of the V(H) locus have similar patterns of histone acetylation, acetylation is narrowly confined to the gene segments, their flanking promoters, and recombinase signal sequence elements. Thus, histone acetylation in the V(H) locus is both locally and globally regulated. Increased histone acetylation accompanies preferential recombination of J(H)-proximal V(H) gene segments in early B-cell ontogeny, and decreased histone acetylation accompanies inhibition of V-DJ recombination in a transgenic model of immunoglobulin heavy-chain allelic exclusion. Thus, changes in histone acetylation appear to be important for both promotion and inhibition of V-DJ rearrangement during B-cell ontogeny and development.

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Year:  2003        PMID: 12640127      PMCID: PMC150727          DOI: 10.1128/MCB.23.7.2438-2450.2003

Source DB:  PubMed          Journal:  Mol Cell Biol        ISSN: 0270-7306            Impact factor:   4.272


  45 in total

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Review 2.  The mechanism and regulation of chromosomal V(D)J recombination.

Authors:  Craig H Bassing; Wojciech Swat; Frederick W Alt
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3.  IL-7 reconstitutes multiple aspects of v-Abl-mediated signaling.

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Journal:  J Immunol       Date:  1998-11-01       Impact factor: 5.422

4.  Accessibility changes across the mouse Igh-V locus during B cell development.

Authors:  B B Haines; P H Brodeur
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5.  The IL-7 receptor controls the accessibility of the TCRgamma locus by Stat5 and histone acetylation.

Authors:  S K Ye; Y Agata; H C Lee; H Kurooka; T Kitamura; A Shimizu; T Honjo; K Ikuta
Journal:  Immunity       Date:  2001-11       Impact factor: 31.745

6.  A change in the structure of Vbeta chromatin associated with TCR beta allelic exclusion.

Authors:  Rajkamal Tripathi; Annette Jackson; Michael S Krangel
Journal:  J Immunol       Date:  2002-03-01       Impact factor: 5.422

7.  A three-megabase yeast artificial chromosome contig spanning the C57BL mouse Igh locus.

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Journal:  J Immunol       Date:  2002-06-01       Impact factor: 5.422

8.  Stepwise activation of the immunoglobulin mu heavy chain gene locus.

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Journal:  EMBO J       Date:  2001-11-15       Impact factor: 11.598

9.  Long-term culture of B lymphocytes and their precursors from murine bone marrow.

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10.  VpreB1/VpreB2/lambda 5 triple-deficient mice show impaired B cell development but functional allelic exclusion of the IgH locus.

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Journal:  J Immunol       Date:  2002-06-15       Impact factor: 5.422

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  34 in total

1.  B cell-specific loss of histone 3 lysine 9 methylation in the V(H) locus depends on Pax5.

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Journal:  Nat Immunol       Date:  2004-07-18       Impact factor: 25.606

2.  A developmentally controlled competitive STAT5-PU.1 DNA binding mechanism regulates activity of the Ig κ E3' enhancer.

Authors:  Suchita Hodawadekar; Kyoungsook Park; Michael A Farrar; Michael L Atchison
Journal:  J Immunol       Date:  2012-01-25       Impact factor: 5.422

3.  Differential regulation of histone acetylation and generation of mutations in switch regions is associated with Ig class switching.

Authors:  Ziqiang Li; Zhonghui Luo; Matthew D Scharff
Journal:  Proc Natl Acad Sci U S A       Date:  2004-10-14       Impact factor: 11.205

4.  Akt phosphorylation of p300 at Ser-1834 is essential for its histone acetyltransferase and transcriptional activity.

Authors:  Wei-Chien Huang; Ching-Chow Chen
Journal:  Mol Cell Biol       Date:  2005-08       Impact factor: 4.272

5.  Chromatin accessibility and epigenetic modifications differ between frequently and infrequently rearranging VH genes.

Authors:  Celia R Espinoza; Ann J Feeney
Journal:  Mol Immunol       Date:  2007-01-10       Impact factor: 4.407

6.  Epigenetic histone modifications do not control Igkappa locus contraction and intranuclear localization in cells with dual B cell-macrophage potential.

Authors:  Suchita Hodawadekar; Fang Wei; Duonan Yu; Andrei Thomas-Tikhonenko; Michael L Atchison
Journal:  J Immunol       Date:  2006-11-01       Impact factor: 5.422

7.  A plant homeodomain in RAG-2 that binds Hypermethylated lysine 4 of histone H3 is necessary for efficient antigen-receptor-gene rearrangement.

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Journal:  Immunity       Date:  2007-10-11       Impact factor: 31.745

8.  The mouse immunoglobulin heavy chain V-D intergenic sequence contains insulators that may regulate ordered V(D)J recombination.

Authors:  Karen Featherstone; Andrew L Wood; Adam J Bowen; Anne E Corcoran
Journal:  J Biol Chem       Date:  2010-01-25       Impact factor: 5.157

9.  Reciprocal patterns of methylation of H3K36 and H3K27 on proximal vs. distal IgVH genes are modulated by IL-7 and Pax5.

Authors:  Cheng-Ran Xu; Lana Schaffer; Steven R Head; Ann J Feeney
Journal:  Proc Natl Acad Sci U S A       Date:  2008-06-17       Impact factor: 11.205

10.  A 220-nucleotide deletion of the intronic enhancer reveals an epigenetic hierarchy in immunoglobulin heavy chain locus activation.

Authors:  Tirtha Chakraborty; Thomas Perlot; Ramesh Subrahmanyam; Anant Jani; Peter H Goff; Yu Zhang; Irina Ivanova; Frederick W Alt; Ranjan Sen
Journal:  J Exp Med       Date:  2009-05-04       Impact factor: 14.307

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