Literature DB >> 21202987

Ethyl 4-(3-butyrylthio-ureido)benzoate.

Sohail Saeed, Moazzam Hussain Bhatti, Muhammad Kalim Tahir, Peter G Jones.   

Abstract

The title compound, C(14)H(18)N(2)O(3)S, crystallizes in the thio-amide form with an intra-molecular N-H⋯O hydrogen bond associated with the thio-urea unit. With the benzoic acid and the butyrylthio-ureido units, the mol-ecule consists of two planar building blocks connected by the common NH function adjacent to the aromatic ring. The inter-planar angle is 33.38 (3)°. Mol-ecules are connected in chains parallel to [110] by classical hydrogen bonds of the N-H⋯O type from the other NH group to the benzoate C=O of a neighboring mol-ecule.

Entities:  

Year:  2008        PMID: 21202987      PMCID: PMC2961839          DOI: 10.1107/S1600536808017868

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related literature, see: del Campo et al. (2002 ▶); D’hooghe et al. (2005 ▶); Dušek (1985 ▶); Huebner et al. (1953 ▶); Rodriguez-Fernandez et al. (2005 ▶); Xu et al. (2004 ▶); Zeng et al. (2003 ▶).

Experimental

Crystal data

C14H18N2O3S M = 294.36 Triclinic, a = 7.9817 (4) Å b = 9.8843 (6) Å c = 11.0759 (6) Å α = 114.472 (6)° β = 101.156 (4)° γ = 102.277 (5)° V = 737.15 (7) Å3 Z = 2 Mo Kα radiation μ = 0.23 mm−1 T = 100 (2) K 0.28 × 0.18 × 0.12 mm

Data collection

Oxford Diffraction Xcalibur S diffractometer Absorption correction: multi-scan (CrysAlis RED; Oxford Diffraction, 2008 ▶) T min = 0.944, T max = 1.000 (expected range = 0.918–0.973) 15025 measured reflections 4104 independent reflections 3045 reflections with I > 2σ(I) R int = 0.036

Refinement

R[F 2 > 2σ(F 2)] = 0.037 wR(F 2) = 0.096 S = 0.96 4104 reflections 191 parameters 1 restraint H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.45 e Å−3 Δρmin = −0.24 e Å−3 Data collection: CrysAlis CCD (Oxford Diffraction, 2008 ▶); cell refinement: CrysAlis CCD; data reduction: CrysAlis RED (Oxford Diffraction, 2008 ▶); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: XP (Siemens, 1994 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536808017868/im2072sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536808017868/im2072Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C14H18N2O3SZ = 2
Mr = 294.36F000 = 312
Triclinic, P1Dx = 1.326 Mg m3
Hall symbol: -P 1Melting point: 412 K
a = 7.9817 (4) ÅMo Kα radiation λ = 0.71073 Å
b = 9.8843 (6) ÅCell parameters from 7295 reflections
c = 11.0759 (6) Åθ = 2.8–30.7º
α = 114.472 (6)ºµ = 0.23 mm1
β = 101.156 (4)ºT = 100 (2) K
γ = 102.277 (5)ºPyramid, colourless
V = 737.15 (7) Å30.28 × 0.18 × 0.12 mm
Oxford Diffraction Xcalibur S diffractometer4104 independent reflections
Radiation source: Enhance (Mo) X-ray Source3045 reflections with I > 2σ(I)
Monochromator: graphiteRint = 0.036
Detector resolution: 16.1057 pixels mm-1θmax = 30.8º
T = 100(2) Kθmin = 2.8º
ω scansh = −10→11
Absorption correction: multi-scan(CrysAlis RED; Oxford Diffraction, 2008)k = −14→13
Tmin = 0.944, Tmax = 1.000l = −15→15
15025 measured reflections
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.037H atoms treated by a mixture of independent and constrained refinement
wR(F2) = 0.096  w = 1/[σ2(Fo2) + (0.059P)2] where P = (Fo2 + 2Fc2)/3
S = 0.96(Δ/σ)max = 0.001
4104 reflectionsΔρmax = 0.45 e Å3
191 parametersΔρmin = −0.24 e Å3
1 restraintExtinction correction: none
Primary atom site location: structure-invariant direct methods
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.Least-squares planes (x,y,z in crystal coordinates) and deviations from them (* indicates atom used to define plane)- 7.3219 (0.0010) x + 3.9334 (0.0038) y + 4.1423 (0.0037) z = 2.1058 (0.0010)* -0.1410 (0.0006) S * -0.1556 (0.0012) C1 * -0.0747 (0.0014) C2 * 0.1521 (0.0012) C3 * 0.1191 (0.0012) C4 * -0.0053 (0.0010) C5 * 0.0111 (0.0008) O1 * 0.2033 (0.0010) N1 * -0.1089 (0.0009) N2Rms deviation of fitted atoms = 0.1249- 6.2227 (0.0013) x + 7.6804 (0.0015) y - 1.8402 (0.0041) z = 2.0195 (0.0017)Angle to previous plane (with approximate e.s.d.) = 33.38 (0.03)* -0.0510 (0.0011) C6 * -0.1492 (0.0011) C7 * -0.0777 (0.0011) C8 * 0.0751 (0.0012) C9 * 0.1972 (0.0012) C10 * 0.1468 (0.0011) C11 * 0.0732 (0.0011) C12 * 0.0367 (0.0013) C13 * -0.2621 (0.0011) C14 * 0.0788 (0.0009) O2 * 0.0421 (0.0010) O3 * -0.1099 (0.0009) N2Rms deviation of fitted atoms = 0.1266
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
S0.47787 (5)0.62325 (4)0.72720 (3)0.02040 (10)
O10.11708 (12)0.45529 (11)0.28568 (9)0.0208 (2)
O21.03683 (13)1.25923 (10)0.60929 (9)0.0217 (2)
O31.04639 (12)1.31498 (10)0.82958 (9)0.0200 (2)
N10.20683 (14)0.45249 (13)0.49337 (11)0.0164 (2)
H010.186 (2)0.3993 (17)0.5294 (16)0.020 (4)*
N20.38248 (15)0.68105 (13)0.51142 (11)0.0168 (2)
H020.318 (2)0.6327 (19)0.4292 (16)0.034 (5)*
C1−0.2318 (2)−0.03015 (17)0.08970 (15)0.0334 (4)
H1A−0.1512−0.08730.10610.050*
H1B−0.2954−0.0787−0.01070.050*
H1C−0.3200−0.03430.13960.050*
C2−0.1213 (2)0.14034 (17)0.14262 (14)0.0313 (3)
H2A−0.03330.14420.09120.038*
H2B−0.20270.19710.12380.038*
C3−0.02144 (18)0.22120 (15)0.29715 (13)0.0195 (3)
H3A−0.11100.22450.34800.023*
H3B0.04970.15740.31620.023*
C40.10397 (16)0.38601 (15)0.35434 (13)0.0161 (3)
C50.35361 (16)0.58945 (14)0.57240 (12)0.0152 (2)
C60.52972 (17)0.81999 (14)0.56141 (13)0.0158 (2)
C70.60248 (17)0.84283 (15)0.46402 (13)0.0177 (3)
H70.55450.76590.36810.021*
C80.74473 (18)0.97773 (15)0.50722 (13)0.0174 (3)
H80.79320.99370.44050.021*
C90.81749 (17)1.09026 (14)0.64780 (13)0.0162 (3)
C100.74195 (17)1.06811 (14)0.74442 (13)0.0176 (3)
H100.78981.14530.84020.021*
C110.59726 (18)0.93406 (15)0.70161 (13)0.0183 (3)
H110.54480.92030.76750.022*
C120.97646 (17)1.22913 (14)0.69088 (13)0.0168 (3)
C131.20350 (18)1.45409 (16)0.88185 (14)0.0237 (3)
H13A1.16741.53520.86320.028*
H13B1.29421.42650.83500.028*
C141.28094 (19)1.51477 (17)1.03564 (14)0.0267 (3)
H14A1.18821.53691.08020.040*
H14B1.38361.61161.07510.040*
H14C1.32181.43561.05250.040*
U11U22U33U12U13U23
S0.02247 (18)0.01856 (17)0.01304 (16)−0.00118 (13)−0.00170 (12)0.00807 (12)
O10.0212 (5)0.0233 (5)0.0159 (5)0.0035 (4)0.0012 (4)0.0114 (4)
O20.0249 (5)0.0201 (5)0.0190 (5)0.0014 (4)0.0087 (4)0.0103 (4)
O30.0195 (5)0.0196 (5)0.0147 (4)−0.0025 (4)0.0005 (4)0.0091 (4)
N10.0176 (5)0.0163 (5)0.0118 (5)0.0002 (4)0.0020 (4)0.0072 (4)
N20.0179 (5)0.0166 (5)0.0114 (5)0.0007 (4)0.0007 (4)0.0069 (4)
C10.0376 (9)0.0212 (7)0.0205 (7)0.0011 (6)−0.0044 (6)0.0010 (6)
C20.0431 (9)0.0214 (7)0.0159 (7)0.0027 (6)−0.0031 (6)0.0059 (6)
C30.0197 (6)0.0180 (6)0.0138 (6)0.0018 (5)0.0023 (5)0.0046 (5)
C40.0147 (6)0.0193 (6)0.0126 (6)0.0058 (5)0.0036 (5)0.0062 (5)
C50.0153 (6)0.0146 (6)0.0138 (6)0.0040 (5)0.0046 (5)0.0055 (5)
C60.0153 (6)0.0149 (6)0.0166 (6)0.0032 (5)0.0030 (5)0.0085 (5)
C70.0218 (7)0.0169 (6)0.0128 (6)0.0053 (5)0.0041 (5)0.0066 (5)
C80.0220 (6)0.0178 (6)0.0155 (6)0.0063 (5)0.0071 (5)0.0102 (5)
C90.0174 (6)0.0152 (6)0.0169 (6)0.0043 (5)0.0045 (5)0.0093 (5)
C100.0215 (6)0.0159 (6)0.0132 (6)0.0043 (5)0.0040 (5)0.0065 (5)
C110.0215 (6)0.0188 (6)0.0157 (6)0.0050 (5)0.0073 (5)0.0093 (5)
C120.0186 (6)0.0165 (6)0.0170 (6)0.0063 (5)0.0048 (5)0.0096 (5)
C130.0192 (7)0.0222 (7)0.0232 (7)−0.0037 (5)−0.0011 (5)0.0135 (6)
C140.0227 (7)0.0281 (8)0.0198 (7)0.0003 (6)0.0025 (5)0.0086 (6)
S—C51.6617 (13)C13—C141.4939 (18)
O1—C41.2207 (15)N1—H010.791 (13)
O2—C121.2114 (15)N2—H020.823 (15)
O3—C121.3336 (15)C1—H1A0.9800
O3—C131.4576 (15)C1—H1B0.9800
N1—C51.3850 (16)C1—H1C0.9800
N1—C41.3856 (16)C2—H2A0.9900
N2—C51.3443 (16)C2—H2B0.9900
N2—C61.4161 (16)C3—H3A0.9900
C1—C21.520 (2)C3—H3B0.9900
C2—C31.5071 (18)C7—H70.9500
C3—C41.5044 (17)C8—H80.9500
C6—C111.3929 (17)C10—H100.9500
C6—C71.3930 (17)C11—H110.9500
C7—C81.3833 (17)C13—H13A0.9900
C8—C91.3926 (17)C13—H13B0.9900
C9—C101.3944 (17)C14—H14A0.9800
C9—C121.4846 (17)C14—H14B0.9800
C10—C111.3896 (17)C14—H14C0.9800
C12—O3—C13116.02 (10)C2—C1—H1C109.5
C5—N1—C4129.07 (11)H1A—C1—H1C109.5
C5—N2—C6127.24 (11)H1B—C1—H1C109.5
C3—C2—C1111.68 (12)C3—C2—H2A109.3
C4—C3—C2114.61 (11)C1—C2—H2A109.3
O1—C4—N1122.53 (12)C3—C2—H2B109.3
O1—C4—C3123.91 (11)C1—C2—H2B109.3
N1—C4—C3113.56 (11)H2A—C2—H2B107.9
N2—C5—N1114.66 (11)C4—C3—H3A108.6
N2—C5—S126.56 (9)C2—C3—H3A108.6
N1—C5—S118.75 (9)C4—C3—H3B108.6
C11—C6—C7120.20 (11)C2—C3—H3B108.6
C11—C6—N2122.15 (11)H3A—C3—H3B107.6
C7—C6—N2117.61 (11)C8—C7—H7120.1
C8—C7—C6119.86 (11)C6—C7—H7120.1
C7—C8—C9120.51 (11)C7—C8—H8119.7
C8—C9—C10119.35 (12)C9—C8—H8119.7
C8—C9—C12118.79 (11)C11—C10—H10119.7
C10—C9—C12121.84 (11)C9—C10—H10119.7
C11—C10—C9120.51 (12)C10—C11—H11120.2
C10—C11—C6119.52 (11)C6—C11—H11120.2
O2—C12—O3124.13 (12)O3—C13—H13A110.2
O2—C12—C9123.78 (11)C14—C13—H13A110.2
O3—C12—C9112.08 (10)O3—C13—H13B110.2
O3—C13—C14107.33 (10)C14—C13—H13B110.2
C5—N1—H01115.6 (11)H13A—C13—H13B108.5
C4—N1—H01114.8 (11)C13—C14—H14A109.5
C5—N2—H02109.4 (11)C13—C14—H14B109.5
C6—N2—H02121.4 (11)H14A—C14—H14B109.5
C2—C1—H1A109.5C13—C14—H14C109.5
C2—C1—H1B109.5H14A—C14—H14C109.5
H1A—C1—H1B109.5H14B—C14—H14C109.5
C1—C2—C3—C4174.75 (13)C7—C8—C9—C10−1.97 (19)
C5—N1—C4—O1−10.3 (2)C7—C8—C9—C12176.71 (11)
C5—N1—C4—C3168.79 (12)C8—C9—C10—C110.99 (19)
C2—C3—C4—O14.85 (19)C12—C9—C10—C11−177.65 (12)
C2—C3—C4—N1−174.24 (12)C9—C10—C11—C61.1 (2)
C6—N2—C5—N1−174.22 (11)C7—C6—C11—C10−2.31 (19)
C6—N2—C5—S4.13 (19)N2—C6—C11—C10−179.92 (12)
C4—N1—C5—N210.80 (19)C13—O3—C12—O21.00 (18)
C4—N1—C5—S−167.69 (10)C13—O3—C12—C9179.95 (10)
C5—N2—C6—C11−42.44 (19)C8—C9—C12—O27.60 (19)
C5—N2—C6—C7139.90 (13)C10—C9—C12—O2−173.76 (13)
C11—C6—C7—C81.35 (19)C8—C9—C12—O3−171.36 (12)
N2—C6—C7—C8179.06 (11)C10—C9—C12—O37.28 (17)
C6—C7—C8—C90.81 (19)C12—O3—C13—C14−169.36 (11)
D—H···AD—HH···AD···AD—H···A
N2—H02···O10.82 (2)1.92 (2)2.653 (1)148 (2)
N1—H01···O2i0.79 (1)2.20 (1)2.957 (1)160 (2)
C13—H13A···O1ii0.992.583.363 (2)136
C1—H1B···Siii0.983.003.854 (2)147
C13—H13B···Siv0.992.963.577 (1)122
C14—H14C···Sv0.982.983.821 (2)144
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N2—H02⋯O10.82 (2)1.92 (2)2.653 (1)148 (2)
N1—H01⋯O2i0.79 (1)2.20 (1)2.957 (1)160 (2)
C13—H13A⋯O1ii0.992.583.363 (2)136
C1—H1B⋯Siii0.983.003.854 (2)147
C13—H13B⋯Siv0.992.963.577 (1)122
C14—H14C⋯Sv0.982.983.821 (2)144

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) ; (v) .

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