| Literature DB >> 21577521 |
Sohail Saeed, Naghmana Rashid, Rizwan Hussain, Peter G Jones.
Abstract
The mol-ecule of the title compound, C(15)H(10)N(4)O(3)S(2), is almost planar (r.m.s. deviation = 0.1Å for all non-H atoms). An intra-molecular N-H⋯O=C hydrogen bond is observed. In the crystal, mol-ecules are connected into layers parallel to (10) by a classical inter-molecular hydrogen bond from the second NH group to a nitro O atom and by three weak hydrogen bonds of the C-H⋯X type (X = O or S(thione)).Entities:
Year: 2009 PMID: 21577521 PMCID: PMC2970100 DOI: 10.1107/S1600536809030803
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C15H10N4O3S2 | |
| Monoclinic, | Cu |
| Hall symbol: -P 2yn | Cell parameters from 21284 reflections |
| θ = 3.8–75.7° | |
| µ = 3.50 mm−1 | |
| β = 96.446 (4)° | Lath, yellow |
| 0.20 × 0.10 × 0.05 mm | |
| Oxford Diffraction Xcalibur Nova A diffractometer | 3026 independent reflections |
| Radiation source: Nova (Cu) X-ray Source | 2834 reflections with |
| mirror | |
| Detector resolution: 10.3543 pixels mm-1 | θmax = 75.9°, θmin = 4.6° |
| ω scans | |
| Absorption correction: multi-scan ( | |
| 30943 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 3026 reflections | (Δ/σ)max = 0.001 |
| 225 parameters | Δρmax = 0.28 e Å−3 |
| 0 restraints | Δρmin = −0.24 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| S1 | 0.53606 (4) | 0.470055 (17) | 0.84776 (3) | 0.01726 (10) | |
| C2 | 0.44766 (17) | 0.43337 (7) | 0.71218 (11) | 0.0165 (3) | |
| N3 | 0.45826 (16) | 0.36156 (6) | 0.69808 (10) | 0.0194 (2) | |
| C3A | 0.54057 (19) | 0.32891 (8) | 0.80022 (12) | 0.0190 (3) | |
| C4 | 0.5778 (2) | 0.25256 (8) | 0.81532 (13) | 0.0232 (3) | |
| H4 | 0.5452 | 0.2182 | 0.7538 | 0.028* | |
| C5 | 0.6629 (2) | 0.22814 (8) | 0.92178 (13) | 0.0248 (3) | |
| H5 | 0.6894 | 0.1765 | 0.9331 | 0.030* | |
| C6 | 0.7108 (2) | 0.27842 (8) | 1.01331 (12) | 0.0234 (3) | |
| H6 | 0.7681 | 0.2602 | 1.0859 | 0.028* | |
| C7 | 0.67605 (19) | 0.35414 (8) | 0.99963 (12) | 0.0209 (3) | |
| H7 | 0.7094 | 0.3883 | 1.0614 | 0.025* | |
| C7A | 0.59024 (18) | 0.37870 (7) | 0.89188 (12) | 0.0178 (3) | |
| S2 | 0.43025 (6) | 0.610190 (19) | 0.71210 (3) | 0.02877 (12) | |
| N1 | 0.36489 (16) | 0.47552 (6) | 0.61966 (10) | 0.0173 (2) | |
| H01 | 0.316 (3) | 0.4498 (11) | 0.5646 (16) | 0.029 (5)* | |
| N2 | 0.25433 (16) | 0.57570 (6) | 0.50564 (10) | 0.0179 (2) | |
| H02 | 0.260 (3) | 0.6224 (11) | 0.5014 (16) | 0.028 (5)* | |
| N4 | −0.17337 (16) | 0.67589 (7) | 0.00397 (10) | 0.0215 (2) | |
| O1 | 0.15674 (15) | 0.46515 (5) | 0.42156 (8) | 0.0227 (2) | |
| O2 | −0.20909 (16) | 0.74281 (6) | 0.00649 (9) | 0.0300 (3) | |
| O3 | −0.19731 (17) | 0.63730 (6) | −0.08377 (9) | 0.0314 (3) | |
| C8 | 0.34765 (18) | 0.55045 (7) | 0.61124 (12) | 0.0183 (3) | |
| C9 | 0.16239 (18) | 0.53355 (7) | 0.41710 (11) | 0.0174 (3) | |
| C10 | 0.07004 (18) | 0.57425 (7) | 0.31352 (11) | 0.0168 (3) | |
| C11 | 0.04521 (19) | 0.65149 (7) | 0.30881 (12) | 0.0194 (3) | |
| H11 | 0.0855 | 0.6812 | 0.3749 | 0.023* | |
| C12 | −0.03826 (19) | 0.68511 (8) | 0.20783 (12) | 0.0200 (3) | |
| H12 | −0.0567 | 0.7376 | 0.2040 | 0.024* | |
| C13 | −0.09376 (18) | 0.64017 (7) | 0.11316 (11) | 0.0177 (3) | |
| C14 | −0.07437 (19) | 0.56315 (8) | 0.11565 (11) | 0.0188 (3) | |
| H14 | −0.1166 | 0.5338 | 0.0495 | 0.023* | |
| C15 | 0.00793 (19) | 0.53013 (7) | 0.21676 (12) | 0.0186 (3) | |
| H15 | 0.0224 | 0.4774 | 0.2207 | 0.022* |
| S1 | 0.01993 (17) | 0.01434 (16) | 0.01670 (17) | 0.00078 (11) | −0.00157 (12) | 0.00075 (10) |
| C2 | 0.0163 (6) | 0.0159 (6) | 0.0173 (6) | −0.0001 (5) | 0.0017 (5) | 0.0013 (5) |
| N3 | 0.0218 (6) | 0.0165 (6) | 0.0194 (5) | 0.0011 (4) | −0.0001 (4) | 0.0017 (4) |
| C3A | 0.0190 (6) | 0.0186 (7) | 0.0192 (6) | 0.0002 (5) | 0.0017 (5) | 0.0028 (5) |
| C4 | 0.0278 (7) | 0.0171 (7) | 0.0240 (7) | 0.0003 (5) | 0.0005 (6) | 0.0008 (5) |
| C5 | 0.0277 (7) | 0.0180 (7) | 0.0284 (7) | 0.0024 (5) | 0.0022 (6) | 0.0072 (6) |
| C6 | 0.0237 (7) | 0.0235 (7) | 0.0222 (7) | 0.0015 (5) | −0.0001 (5) | 0.0076 (5) |
| C7 | 0.0205 (7) | 0.0224 (7) | 0.0192 (6) | 0.0001 (5) | −0.0002 (5) | 0.0018 (5) |
| C7A | 0.0161 (6) | 0.0164 (6) | 0.0209 (6) | 0.0011 (5) | 0.0021 (5) | 0.0023 (5) |
| S2 | 0.0467 (2) | 0.01438 (18) | 0.02184 (19) | −0.00151 (14) | −0.01103 (15) | 0.00050 (12) |
| N1 | 0.0206 (6) | 0.0145 (5) | 0.0159 (5) | 0.0002 (4) | −0.0023 (4) | 0.0008 (4) |
| N2 | 0.0224 (6) | 0.0122 (5) | 0.0183 (5) | 0.0002 (4) | −0.0014 (4) | 0.0016 (4) |
| N4 | 0.0201 (6) | 0.0226 (6) | 0.0206 (6) | −0.0019 (4) | −0.0025 (4) | 0.0037 (5) |
| O1 | 0.0314 (5) | 0.0138 (4) | 0.0214 (5) | 0.0004 (4) | −0.0037 (4) | 0.0006 (4) |
| O2 | 0.0372 (6) | 0.0211 (5) | 0.0294 (6) | 0.0048 (4) | −0.0073 (5) | 0.0060 (4) |
| O3 | 0.0439 (7) | 0.0301 (6) | 0.0182 (5) | −0.0027 (5) | −0.0059 (4) | −0.0006 (4) |
| C8 | 0.0190 (6) | 0.0174 (6) | 0.0182 (6) | 0.0002 (5) | 0.0012 (5) | 0.0023 (5) |
| C9 | 0.0177 (6) | 0.0168 (6) | 0.0179 (6) | 0.0006 (5) | 0.0027 (5) | 0.0000 (5) |
| C10 | 0.0156 (6) | 0.0162 (6) | 0.0186 (6) | −0.0008 (5) | 0.0019 (5) | 0.0008 (5) |
| C11 | 0.0220 (7) | 0.0160 (6) | 0.0190 (6) | −0.0003 (5) | −0.0024 (5) | −0.0019 (5) |
| C12 | 0.0215 (6) | 0.0149 (6) | 0.0227 (7) | 0.0008 (5) | −0.0015 (5) | 0.0002 (5) |
| C13 | 0.0162 (6) | 0.0194 (6) | 0.0168 (6) | 0.0001 (5) | −0.0007 (5) | 0.0026 (5) |
| C14 | 0.0191 (6) | 0.0194 (6) | 0.0178 (6) | −0.0012 (5) | 0.0011 (5) | −0.0018 (5) |
| C15 | 0.0204 (6) | 0.0143 (6) | 0.0210 (7) | −0.0006 (5) | 0.0015 (5) | −0.0005 (5) |
| S1—C7A | 1.7443 (13) | O1—C9 | 1.2269 (16) |
| S1—C2 | 1.7529 (13) | C9—C10 | 1.4927 (18) |
| C2—N3 | 1.2994 (18) | C10—C11 | 1.3949 (19) |
| C2—N1 | 1.3877 (17) | C10—C15 | 1.4017 (19) |
| N3—C3A | 1.3896 (17) | C11—C12 | 1.3890 (18) |
| C3A—C4 | 1.4002 (19) | C12—C13 | 1.3815 (19) |
| C3A—C7A | 1.4009 (19) | C13—C14 | 1.3863 (19) |
| C4—C5 | 1.383 (2) | C14—C15 | 1.3828 (19) |
| C5—C6 | 1.403 (2) | C4—H4 | 0.9500 |
| C6—C7 | 1.385 (2) | C5—H5 | 0.9500 |
| C7—C7A | 1.3982 (18) | C6—H6 | 0.9500 |
| S2—C8 | 1.6439 (14) | C7—H7 | 0.9500 |
| N1—C8 | 1.3499 (17) | N1—H01 | 0.832 (19) |
| N2—C9 | 1.3791 (17) | N2—H02 | 0.84 (2) |
| N2—C8 | 1.4007 (17) | C11—H11 | 0.9500 |
| N4—O3 | 1.2246 (16) | C12—H12 | 0.9500 |
| N4—O2 | 1.2264 (16) | C14—H14 | 0.9500 |
| N4—C13 | 1.4731 (16) | C15—H15 | 0.9500 |
| C7A—S1—C2 | 87.52 (6) | C15—C10—C9 | 116.03 (11) |
| N3—C2—N1 | 117.86 (12) | C12—C11—C10 | 120.24 (12) |
| N3—C2—S1 | 117.58 (10) | C13—C12—C11 | 118.26 (12) |
| N1—C2—S1 | 124.55 (10) | C12—C13—C14 | 122.94 (12) |
| C2—N3—C3A | 109.55 (11) | C12—C13—N4 | 118.49 (12) |
| N3—C3A—C4 | 125.00 (13) | C14—C13—N4 | 118.56 (12) |
| N3—C3A—C7A | 115.09 (12) | C15—C14—C13 | 118.37 (12) |
| C4—C3A—C7A | 119.89 (12) | C14—C15—C10 | 120.15 (12) |
| C5—C4—C3A | 118.59 (13) | C5—C4—H4 | 120.7 |
| C4—C5—C6 | 121.06 (13) | C3A—C4—H4 | 120.7 |
| C7—C6—C5 | 121.08 (13) | C4—C5—H5 | 119.5 |
| C6—C7—C7A | 117.75 (13) | C6—C5—H5 | 119.5 |
| C7—C7A—C3A | 121.62 (12) | C7—C6—H6 | 119.5 |
| C7—C7A—S1 | 128.12 (11) | C5—C6—H6 | 119.5 |
| C3A—C7A—S1 | 110.23 (10) | C6—C7—H7 | 121.1 |
| C8—N1—C2 | 128.62 (12) | C7A—C7—H7 | 121.1 |
| C9—N2—C8 | 127.82 (11) | C8—N1—H01 | 117.8 (13) |
| O3—N4—O2 | 124.13 (12) | C2—N1—H01 | 113.5 (13) |
| O3—N4—C13 | 118.13 (11) | C9—N2—H02 | 121.6 (13) |
| O2—N4—C13 | 117.74 (11) | C8—N2—H02 | 110.6 (13) |
| N1—C8—N2 | 114.50 (12) | C12—C11—H11 | 119.9 |
| N1—C8—S2 | 124.95 (10) | C10—C11—H11 | 119.9 |
| N2—C8—S2 | 120.54 (10) | C13—C12—H12 | 120.9 |
| O1—C9—N2 | 122.03 (12) | C11—C12—H12 | 120.9 |
| O1—C9—C10 | 120.50 (12) | C15—C14—H14 | 120.8 |
| N2—C9—C10 | 117.47 (11) | C13—C14—H14 | 120.8 |
| C11—C10—C15 | 120.00 (12) | C14—C15—H15 | 119.9 |
| C11—C10—C9 | 123.96 (12) | C10—C15—H15 | 119.9 |
| C7A—S1—C2—N3 | −1.03 (11) | C9—N2—C8—N1 | 7.7 (2) |
| C7A—S1—C2—N1 | 177.99 (12) | C9—N2—C8—S2 | −173.54 (11) |
| N1—C2—N3—C3A | −178.55 (11) | C8—N2—C9—O1 | −1.8 (2) |
| S1—C2—N3—C3A | 0.54 (15) | C8—N2—C9—C10 | 178.80 (12) |
| C2—N3—C3A—C4 | −178.51 (13) | O1—C9—C10—C11 | 169.88 (13) |
| C2—N3—C3A—C7A | 0.44 (16) | N2—C9—C10—C11 | −10.69 (19) |
| N3—C3A—C4—C5 | 179.12 (13) | O1—C9—C10—C15 | −10.64 (19) |
| C7A—C3A—C4—C5 | 0.2 (2) | N2—C9—C10—C15 | 168.79 (12) |
| C3A—C4—C5—C6 | 0.3 (2) | C15—C10—C11—C12 | −1.0 (2) |
| C4—C5—C6—C7 | −0.6 (2) | C9—C10—C11—C12 | 178.44 (12) |
| C5—C6—C7—C7A | 0.5 (2) | C10—C11—C12—C13 | −0.5 (2) |
| C6—C7—C7A—C3A | 0.0 (2) | C11—C12—C13—C14 | 1.8 (2) |
| C6—C7—C7A—S1 | −177.83 (11) | C11—C12—C13—N4 | −176.88 (12) |
| N3—C3A—C7A—C7 | −179.35 (12) | O3—N4—C13—C12 | 169.77 (12) |
| C4—C3A—C7A—C7 | −0.3 (2) | O2—N4—C13—C12 | −9.23 (19) |
| N3—C3A—C7A—S1 | −1.19 (15) | O3—N4—C13—C14 | −8.94 (19) |
| C4—C3A—C7A—S1 | 177.82 (11) | O2—N4—C13—C14 | 172.05 (12) |
| C2—S1—C7A—C7 | 179.17 (13) | C12—C13—C14—C15 | −1.4 (2) |
| C2—S1—C7A—C3A | 1.17 (10) | N4—C13—C14—C15 | 177.23 (12) |
| N3—C2—N1—C8 | −175.86 (13) | C13—C14—C15—C10 | −0.2 (2) |
| S1—C2—N1—C8 | 5.1 (2) | C11—C10—C15—C14 | 1.4 (2) |
| C2—N1—C8—N2 | −179.42 (12) | C9—C10—C15—C14 | −178.12 (12) |
| C2—N1—C8—S2 | 1.9 (2) |
| H··· | ||||
| N1—H01···O1 | 0.83 (2) | 1.92 (2) | 2.598 (2) | 138 (2) |
| N2—H02···O2i | 0.84 (2) | 2.42 (2) | 3.261 (2) | 175 (2) |
| C5—H5···O1ii | 0.95 | 2.55 | 3.462 (2) | 161 |
| C11—H11···O2i | 0.95 | 2.41 | 3.318 (2) | 159 |
| C12—H12···S2iii | 0.95 | 2.73 | 3.673 (1) | 173 |
| C7—H7···S2iv | 0.95 | 2.91 | 3.563 (1) | 127 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N1—H01⋯O1 | 0.83 (2) | 1.92 (2) | 2.598 (2) | 138 (2) |
| N2—H02⋯O2i | 0.84 (2) | 2.42 (2) | 3.261 (2) | 175 (2) |
| C5—H5⋯O1ii | 0.95 | 2.55 | 3.462 (2) | 161 |
| C11—H11⋯O2i | 0.95 | 2.41 | 3.318 (2) | 159 |
| C12—H12⋯S2iii | 0.95 | 2.73 | 3.673 (1) | 173 |
| C7—H7⋯S2iv | 0.95 | 2.91 | 3.563 (1) | 127 |
Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .