Literature DB >> 21577521

1-(Benzothia-zol-2-yl)-3-(4-nitro-benzo-yl)thio-urea.

Sohail Saeed, Naghmana Rashid, Rizwan Hussain, Peter G Jones.   

Abstract

The mol-ecule of the title compound, C(15)H(10)N(4)O(3)S(2), is almost planar (r.m.s. deviation = 0.1Å for all non-H atoms). An intra-molecular N-H⋯O=C hydrogen bond is observed. In the crystal, mol-ecules are connected into layers parallel to (10) by a classical inter-molecular hydrogen bond from the second NH group to a nitro O atom and by three weak hydrogen bonds of the C-H⋯X type (X = O or S(thione)).

Entities:  

Year:  2009        PMID: 21577521      PMCID: PMC2970100          DOI: 10.1107/S1600536809030803

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For general background to the chemistry of thio­urea derivatives, see Choi et al. (2008 ▶); Jones et al. (2008 ▶); Su et al. (2006 ▶). For related structures, see: Saeed et al. (2008a ▶,b ▶,c ▶); Yunus et al. (2008 ▶).

Experimental

Crystal data

C15H10N4O3S2 M = 358.39 Monoclinic, a = 7.1596 (3) Å b = 17.9071 (5) Å c = 11.5768 (4) Å β = 96.446 (4)° V = 1474.85 (9) Å3 Z = 4 Cu Kα radiation μ = 3.50 mm−1 T = 100 K 0.20 × 0.10 × 0.05 mm

Data collection

Oxford Diffraction Xcalibur Nova A diffractometer Absorption correction: multi-scan (CrysAlis Pro; Oxford Diffraction, 2009 ▶) T min = 0.682, T max = 1.000 (expected range = 0.573–0.840) 30943 measured reflections 3026 independent reflections 2834 reflections with I > 2σ(I) R int = 0.040

Refinement

R[F 2 > 2σ(F 2)] = 0.029 wR(F 2) = 0.078 S = 1.06 3026 reflections 225 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.28 e Å−3 Δρmin = −0.25 e Å−3 Data collection: CrysAlis Pro (Oxford Diffraction, 2009 ▶); cell refinement: CrysAlis Pro; data reduction: CrysAlis Pro; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: XP (Siemens, 1994 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536809030803/im2131sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809030803/im2131Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C15H10N4O3S2F(000) = 736
Mr = 358.39Dx = 1.614 Mg m3
Monoclinic, P21/nCu Kα radiation, λ = 1.54184 Å
Hall symbol: -P 2ynCell parameters from 21284 reflections
a = 7.1596 (3) Åθ = 3.8–75.7°
b = 17.9071 (5) ŵ = 3.50 mm1
c = 11.5768 (4) ÅT = 100 K
β = 96.446 (4)°Lath, yellow
V = 1474.85 (9) Å30.20 × 0.10 × 0.05 mm
Z = 4
Oxford Diffraction Xcalibur Nova A diffractometer3026 independent reflections
Radiation source: Nova (Cu) X-ray Source2834 reflections with I > 2σ(I)
mirrorRint = 0.040
Detector resolution: 10.3543 pixels mm-1θmax = 75.9°, θmin = 4.6°
ω scansh = −8→9
Absorption correction: multi-scan (CrysAlis PRO; Oxford Diffraction, 2009)k = −22→22
Tmin = 0.682, Tmax = 1.000l = −14→14
30943 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.029Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.078H atoms treated by a mixture of independent and constrained refinement
S = 1.06w = 1/[σ2(Fo2) + (0.0427P)2 + 0.7178P] where P = (Fo2 + 2Fc2)/3
3026 reflections(Δ/σ)max = 0.001
225 parametersΔρmax = 0.28 e Å3
0 restraintsΔρmin = −0.24 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
S10.53606 (4)0.470055 (17)0.84776 (3)0.01726 (10)
C20.44766 (17)0.43337 (7)0.71218 (11)0.0165 (3)
N30.45826 (16)0.36156 (6)0.69808 (10)0.0194 (2)
C3A0.54057 (19)0.32891 (8)0.80022 (12)0.0190 (3)
C40.5778 (2)0.25256 (8)0.81532 (13)0.0232 (3)
H40.54520.21820.75380.028*
C50.6629 (2)0.22814 (8)0.92178 (13)0.0248 (3)
H50.68940.17650.93310.030*
C60.7108 (2)0.27842 (8)1.01331 (12)0.0234 (3)
H60.76810.26021.08590.028*
C70.67605 (19)0.35414 (8)0.99963 (12)0.0209 (3)
H70.70940.38831.06140.025*
C7A0.59024 (18)0.37870 (7)0.89188 (12)0.0178 (3)
S20.43025 (6)0.610190 (19)0.71210 (3)0.02877 (12)
N10.36489 (16)0.47552 (6)0.61966 (10)0.0173 (2)
H010.316 (3)0.4498 (11)0.5646 (16)0.029 (5)*
N20.25433 (16)0.57570 (6)0.50564 (10)0.0179 (2)
H020.260 (3)0.6224 (11)0.5014 (16)0.028 (5)*
N4−0.17337 (16)0.67589 (7)0.00397 (10)0.0215 (2)
O10.15674 (15)0.46515 (5)0.42156 (8)0.0227 (2)
O2−0.20909 (16)0.74281 (6)0.00649 (9)0.0300 (3)
O3−0.19731 (17)0.63730 (6)−0.08377 (9)0.0314 (3)
C80.34765 (18)0.55045 (7)0.61124 (12)0.0183 (3)
C90.16239 (18)0.53355 (7)0.41710 (11)0.0174 (3)
C100.07004 (18)0.57425 (7)0.31352 (11)0.0168 (3)
C110.04521 (19)0.65149 (7)0.30881 (12)0.0194 (3)
H110.08550.68120.37490.023*
C12−0.03826 (19)0.68511 (8)0.20783 (12)0.0200 (3)
H12−0.05670.73760.20400.024*
C13−0.09376 (18)0.64017 (7)0.11316 (11)0.0177 (3)
C14−0.07437 (19)0.56315 (8)0.11565 (11)0.0188 (3)
H14−0.11660.53380.04950.023*
C150.00793 (19)0.53013 (7)0.21676 (12)0.0186 (3)
H150.02240.47740.22070.022*
U11U22U33U12U13U23
S10.01993 (17)0.01434 (16)0.01670 (17)0.00078 (11)−0.00157 (12)0.00075 (10)
C20.0163 (6)0.0159 (6)0.0173 (6)−0.0001 (5)0.0017 (5)0.0013 (5)
N30.0218 (6)0.0165 (6)0.0194 (5)0.0011 (4)−0.0001 (4)0.0017 (4)
C3A0.0190 (6)0.0186 (7)0.0192 (6)0.0002 (5)0.0017 (5)0.0028 (5)
C40.0278 (7)0.0171 (7)0.0240 (7)0.0003 (5)0.0005 (6)0.0008 (5)
C50.0277 (7)0.0180 (7)0.0284 (7)0.0024 (5)0.0022 (6)0.0072 (6)
C60.0237 (7)0.0235 (7)0.0222 (7)0.0015 (5)−0.0001 (5)0.0076 (5)
C70.0205 (7)0.0224 (7)0.0192 (6)0.0001 (5)−0.0002 (5)0.0018 (5)
C7A0.0161 (6)0.0164 (6)0.0209 (6)0.0011 (5)0.0021 (5)0.0023 (5)
S20.0467 (2)0.01438 (18)0.02184 (19)−0.00151 (14)−0.01103 (15)0.00050 (12)
N10.0206 (6)0.0145 (5)0.0159 (5)0.0002 (4)−0.0023 (4)0.0008 (4)
N20.0224 (6)0.0122 (5)0.0183 (5)0.0002 (4)−0.0014 (4)0.0016 (4)
N40.0201 (6)0.0226 (6)0.0206 (6)−0.0019 (4)−0.0025 (4)0.0037 (5)
O10.0314 (5)0.0138 (4)0.0214 (5)0.0004 (4)−0.0037 (4)0.0006 (4)
O20.0372 (6)0.0211 (5)0.0294 (6)0.0048 (4)−0.0073 (5)0.0060 (4)
O30.0439 (7)0.0301 (6)0.0182 (5)−0.0027 (5)−0.0059 (4)−0.0006 (4)
C80.0190 (6)0.0174 (6)0.0182 (6)0.0002 (5)0.0012 (5)0.0023 (5)
C90.0177 (6)0.0168 (6)0.0179 (6)0.0006 (5)0.0027 (5)0.0000 (5)
C100.0156 (6)0.0162 (6)0.0186 (6)−0.0008 (5)0.0019 (5)0.0008 (5)
C110.0220 (7)0.0160 (6)0.0190 (6)−0.0003 (5)−0.0024 (5)−0.0019 (5)
C120.0215 (6)0.0149 (6)0.0227 (7)0.0008 (5)−0.0015 (5)0.0002 (5)
C130.0162 (6)0.0194 (6)0.0168 (6)0.0001 (5)−0.0007 (5)0.0026 (5)
C140.0191 (6)0.0194 (6)0.0178 (6)−0.0012 (5)0.0011 (5)−0.0018 (5)
C150.0204 (6)0.0143 (6)0.0210 (7)−0.0006 (5)0.0015 (5)−0.0005 (5)
S1—C7A1.7443 (13)O1—C91.2269 (16)
S1—C21.7529 (13)C9—C101.4927 (18)
C2—N31.2994 (18)C10—C111.3949 (19)
C2—N11.3877 (17)C10—C151.4017 (19)
N3—C3A1.3896 (17)C11—C121.3890 (18)
C3A—C41.4002 (19)C12—C131.3815 (19)
C3A—C7A1.4009 (19)C13—C141.3863 (19)
C4—C51.383 (2)C14—C151.3828 (19)
C5—C61.403 (2)C4—H40.9500
C6—C71.385 (2)C5—H50.9500
C7—C7A1.3982 (18)C6—H60.9500
S2—C81.6439 (14)C7—H70.9500
N1—C81.3499 (17)N1—H010.832 (19)
N2—C91.3791 (17)N2—H020.84 (2)
N2—C81.4007 (17)C11—H110.9500
N4—O31.2246 (16)C12—H120.9500
N4—O21.2264 (16)C14—H140.9500
N4—C131.4731 (16)C15—H150.9500
C7A—S1—C287.52 (6)C15—C10—C9116.03 (11)
N3—C2—N1117.86 (12)C12—C11—C10120.24 (12)
N3—C2—S1117.58 (10)C13—C12—C11118.26 (12)
N1—C2—S1124.55 (10)C12—C13—C14122.94 (12)
C2—N3—C3A109.55 (11)C12—C13—N4118.49 (12)
N3—C3A—C4125.00 (13)C14—C13—N4118.56 (12)
N3—C3A—C7A115.09 (12)C15—C14—C13118.37 (12)
C4—C3A—C7A119.89 (12)C14—C15—C10120.15 (12)
C5—C4—C3A118.59 (13)C5—C4—H4120.7
C4—C5—C6121.06 (13)C3A—C4—H4120.7
C7—C6—C5121.08 (13)C4—C5—H5119.5
C6—C7—C7A117.75 (13)C6—C5—H5119.5
C7—C7A—C3A121.62 (12)C7—C6—H6119.5
C7—C7A—S1128.12 (11)C5—C6—H6119.5
C3A—C7A—S1110.23 (10)C6—C7—H7121.1
C8—N1—C2128.62 (12)C7A—C7—H7121.1
C9—N2—C8127.82 (11)C8—N1—H01117.8 (13)
O3—N4—O2124.13 (12)C2—N1—H01113.5 (13)
O3—N4—C13118.13 (11)C9—N2—H02121.6 (13)
O2—N4—C13117.74 (11)C8—N2—H02110.6 (13)
N1—C8—N2114.50 (12)C12—C11—H11119.9
N1—C8—S2124.95 (10)C10—C11—H11119.9
N2—C8—S2120.54 (10)C13—C12—H12120.9
O1—C9—N2122.03 (12)C11—C12—H12120.9
O1—C9—C10120.50 (12)C15—C14—H14120.8
N2—C9—C10117.47 (11)C13—C14—H14120.8
C11—C10—C15120.00 (12)C14—C15—H15119.9
C11—C10—C9123.96 (12)C10—C15—H15119.9
C7A—S1—C2—N3−1.03 (11)C9—N2—C8—N17.7 (2)
C7A—S1—C2—N1177.99 (12)C9—N2—C8—S2−173.54 (11)
N1—C2—N3—C3A−178.55 (11)C8—N2—C9—O1−1.8 (2)
S1—C2—N3—C3A0.54 (15)C8—N2—C9—C10178.80 (12)
C2—N3—C3A—C4−178.51 (13)O1—C9—C10—C11169.88 (13)
C2—N3—C3A—C7A0.44 (16)N2—C9—C10—C11−10.69 (19)
N3—C3A—C4—C5179.12 (13)O1—C9—C10—C15−10.64 (19)
C7A—C3A—C4—C50.2 (2)N2—C9—C10—C15168.79 (12)
C3A—C4—C5—C60.3 (2)C15—C10—C11—C12−1.0 (2)
C4—C5—C6—C7−0.6 (2)C9—C10—C11—C12178.44 (12)
C5—C6—C7—C7A0.5 (2)C10—C11—C12—C13−0.5 (2)
C6—C7—C7A—C3A0.0 (2)C11—C12—C13—C141.8 (2)
C6—C7—C7A—S1−177.83 (11)C11—C12—C13—N4−176.88 (12)
N3—C3A—C7A—C7−179.35 (12)O3—N4—C13—C12169.77 (12)
C4—C3A—C7A—C7−0.3 (2)O2—N4—C13—C12−9.23 (19)
N3—C3A—C7A—S1−1.19 (15)O3—N4—C13—C14−8.94 (19)
C4—C3A—C7A—S1177.82 (11)O2—N4—C13—C14172.05 (12)
C2—S1—C7A—C7179.17 (13)C12—C13—C14—C15−1.4 (2)
C2—S1—C7A—C3A1.17 (10)N4—C13—C14—C15177.23 (12)
N3—C2—N1—C8−175.86 (13)C13—C14—C15—C10−0.2 (2)
S1—C2—N1—C85.1 (2)C11—C10—C15—C141.4 (2)
C2—N1—C8—N2−179.42 (12)C9—C10—C15—C14−178.12 (12)
C2—N1—C8—S21.9 (2)
D—H···AD—HH···AD···AD—H···A
N1—H01···O10.83 (2)1.92 (2)2.598 (2)138 (2)
N2—H02···O2i0.84 (2)2.42 (2)3.261 (2)175 (2)
C5—H5···O1ii0.952.553.462 (2)161
C11—H11···O2i0.952.413.318 (2)159
C12—H12···S2iii0.952.733.673 (1)173
C7—H7···S2iv0.952.913.563 (1)127
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N1—H01⋯O10.83 (2)1.92 (2)2.598 (2)138 (2)
N2—H02⋯O2i0.84 (2)2.42 (2)3.261 (2)175 (2)
C5—H5⋯O1ii0.952.553.462 (2)161
C11—H11⋯O2i0.952.413.318 (2)159
C12—H12⋯S2iii0.952.733.673 (1)173
C7—H7⋯S2iv0.952.913.563 (1)127

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .

  5 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  1-(1,3-Benzothia-zol-2-yl)-3-benzoyl-thio-urea.

Authors:  Uzma Yunus; Muhammad Kalim Tahir; Moazzam Hussain Bhatti; Saqib Ali; Wai-Yeung Wong
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2007-12-06

3.  1-(4-Acetyl-phen-yl)-3-butyrylthio-urea.

Authors:  Sohail Saeed; Moazzam Hussain Bhatti; Uzma Yunus; Peter G Jones
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-07-23

4.  Ethyl 4-(3-benzoyl-thio-ureido)benzoate.

Authors:  Sohail Saeed; Moazzam Hussain Bhatti; Uzma Yunus; Peter G Jones
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-07-12

5.  Ethyl 4-(3-butyrylthio-ureido)benzoate.

Authors:  Sohail Saeed; Moazzam Hussain Bhatti; Muhammad Kalim Tahir; Peter G Jones
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-06-28
  5 in total

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