Literature DB >> 21583565

1-(4-Bromo-phen-yl)-1-(4-nitro-benzo-yl)thio-urea.

Sohail Saeed, Naghmana Rashid, Arifa Tahir, Peter G Jones.   

Abstract

The title compound, C(14)H(10)BrN(3)O(3)S, crystallizes as two concomitant polymorphs that differ in colour (one yellow and one colourless). Only the structure of the colourless form could be determined. The mol-ecule exists in the thio-amide form with an intra-molecular N-H⋯O=C hydrogen bond across the thio-urea system. Mol-ecules are linked into layers parallel to (120) by Br⋯O(nitro) contacts [3.103 (1) Å], classical hydrogen bonds from the other NH function to the S atom and N(nitro)⋯O=C contacts. The layers are linked by weak C-H⋯O(nitro) hydrogen bonds to produce the observed three-dimensional network.

Entities:  

Year:  2009        PMID: 21583565      PMCID: PMC2977201          DOI: 10.1107/S1600536809025884

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For general background to thio­urea complexe, see: Ugur et al. (2006 ▶). For the biological activity of thio­urea derivatives, see: Glasser & Doughty (1964 ▶); Huebner et al. (1953 ▶); Manjula et al. (2009 ▶); Zheng et al. (2004 ▶). For related structures, see: Saeed et al. (2008a ▶,b ▶,c ▶).

Experimental

Crystal data

C14H10BrN3O3S M = 380.22 Triclinic, a = 7.0112 (3) Å b = 8.9697 (5) Å c = 11.9693 (6) Å α = 87.386 (5)° β = 75.044 (4)° γ = 87.511 (4)° V = 726.08 (6) Å3 Z = 2 Mo Kα radiation μ = 2.99 mm−1 T = 100 K 0.3 × 0.2 × 0.2 mm

Data collection

Oxford Diffraction Xcalibur Eos diffractometer Absorption correction: multi-scan (CrysAlis Pro; Oxford Diffraction, 2009 ▶) T min = 0.945, T max = 1.000 (expected range = 0.520–0.550) 24890 measured reflections 4234 independent reflections 3438 reflections with I > 2σ(I) R int = 0.025

Refinement

R[F 2 > 2σ(F 2)] = 0.022 wR(F 2) = 0.051 S = 0.96 4234 reflections 207 parameters 2 restraints H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.81 e Å−3 Δρmin = −0.80 e Å−3 Data collection: CrysAlis Pro (Oxford Diffraction, 2009 ▶); cell refinement: CrysAlis Pro; data reduction: CrysAlis Pro; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: XP (Siemens, 1994 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536809025884/im2125sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809025884/im2125Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C14H10BrN3O3SZ = 2
Mr = 380.22F(000) = 380
Triclinic, P1Dx = 1.739 Mg m3
Hall symbol: -P 1Melting point: 454 K
a = 7.0112 (3) ÅMo Kα radiation, λ = 0.71073 Å
b = 8.9697 (5) ÅCell parameters from 13461 reflections
c = 11.9693 (6) Åθ = 2.3–31.7°
α = 87.386 (5)°µ = 2.99 mm1
β = 75.044 (4)°T = 100 K
γ = 87.511 (4)°Block, colourless
V = 726.08 (6) Å30.3 × 0.2 × 0.2 mm
Oxford Diffraction Xcalibur Eos diffractometer4234 independent reflections
Radiation source: Enhance (Mo) X-ray Source3438 reflections with I > 2σ(I)
graphiteRint = 0.025
Detector resolution: 16.1419 pixels mm-1θmax = 30.0°, θmin = 2.3°
ω scansh = −9→9
Absorption correction: multi-scan (CrysAlis PRO; Oxford Diffraction, 2009)k = −12→12
Tmin = 0.945, Tmax = 1.000l = −16→16
24890 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.022Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.051H atoms treated by a mixture of independent and constrained refinement
S = 0.96w = 1/[σ2(Fo2) + (0.0305P)2] where P = (Fo2 + 2Fc2)/3
4234 reflections(Δ/σ)max = 0.002
207 parametersΔρmax = 0.81 e Å3
2 restraintsΔρmin = −0.79 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.=============================================================================Short contacts:3.1027 (0.0010) Br - O2_$5 2.9569 (0.0014) N3 - O1_$6176.07 (0.05) C4 - Br - O2_$5 117.45 (0.08) Br - O2_$5 - N3_$5 88.60 (0.07) C12 - N3 - O1_$6 133.52 (0.08) N3 - O1_$6 - C8_$6Operators for generating equivalent atoms: $5 x - 2, y + 1, z + 1 $6 - x + 1, -y + 1, -z=============================================================================Least-squares planes (x,y,z in crystal coordinates) and deviations from them (* indicates atom used to define plane)0.3935 (0.0035) x + 6.9720 (0.0023) y - 6.7731 (0.0052) z = 1.9340 (0.0046)* -0.0103 (0.0010) C1 * -0.0015 (0.0010) C2 * 0.0088 (0.0011) C3 * 0.0055 (0.0012) C4 * 0.0052 (0.0011) C5 * 0.0019 (0.0010) C6 * -0.0096 (0.0006) BrRms deviation of fitted atoms = 0.00694.0311 (0.0033) x + 7.2756 (0.0034) y - 0.4894 (0.0028) z = 5.0905 (0.0022)Angle to previous plane (with approximate e.s.d.) = 38.42 (0.04)* 0.0108 (0.0009) C8 * -0.1154 (0.0007) O1 * 0.1064 (0.0009) N2 * 0.0391 (0.0010) C7 * -0.1107 (0.0006) S * 0.0699 (0.0006) N1Rms deviation of fitted atoms = 0.0851- 1.1638 (0.0036) x + 5.3585 (0.0037) y - 9.2611 (0.0039) z = 0.3293 (0.0031)Angle to previous plane (with approximate e.s.d.) = 56.27 (0.04)* -0.0141 (0.0009) C9 * 0.0107 (0.0009) C10 * 0.0018 (0.0009) C11 * -0.0108 (0.0009) C12 * 0.0072 (0.0009) C13 * 0.0053 (0.0009) C14Rms deviation of fitted atoms = 0.00921.5803 (0.0099) x - 4.5675 (0.0126) y + 10.0071 (0.0113) z = 0.2418 (0.0080)Angle to previous plane (with approximate e.s.d.) = 6.52 (0.17)* 0.0000 (0.0000) N3 * 0.0000 (0.0000) O2 * 0.0000 (0.0000) O3Rms deviation of fitted atoms = 0.0000
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
S0.23307 (5)0.59552 (4)0.59750 (3)0.01794 (7)
Br−0.60756 (2)1.070560 (16)0.782568 (13)0.02754 (5)
O10.14426 (13)0.61950 (11)0.23224 (8)0.0212 (2)
O21.06603 (14)0.23725 (12)−0.03589 (9)0.0267 (2)
O30.84622 (15)0.09309 (11)−0.06698 (9)0.0266 (2)
N10.03832 (16)0.71824 (12)0.44897 (10)0.0159 (2)
H010.015 (2)0.7119 (19)0.3861 (13)0.030 (5)*
N20.31103 (16)0.56699 (12)0.37204 (9)0.0152 (2)
H020.4011 (19)0.5244 (16)0.3860 (13)0.015 (4)*
N30.89393 (17)0.20238 (13)−0.02463 (9)0.0190 (2)
C1−0.10821 (18)0.79834 (14)0.53147 (11)0.0151 (3)
C2−0.3000 (2)0.79948 (15)0.52021 (13)0.0220 (3)
H2−0.33050.74410.46160.026*
C3−0.4475 (2)0.88188 (16)0.59493 (14)0.0259 (3)
H3−0.57920.88330.58740.031*
C4−0.4023 (2)0.96140 (15)0.67991 (12)0.0205 (3)
C5−0.2115 (2)0.96202 (15)0.69167 (12)0.0217 (3)
H5−0.18171.01760.75030.026*
C6−0.0636 (2)0.88033 (15)0.61667 (12)0.0199 (3)
H60.06830.88050.62370.024*
C70.18736 (18)0.63277 (14)0.46887 (11)0.0143 (2)
C80.28512 (19)0.56083 (14)0.26223 (11)0.0159 (3)
C90.44489 (18)0.47137 (14)0.18279 (10)0.0146 (2)
C100.39423 (19)0.35787 (15)0.12081 (11)0.0180 (3)
H100.25930.34150.12580.022*
C110.5409 (2)0.26914 (15)0.05200 (11)0.0181 (3)
H110.50870.19050.01030.022*
C120.73630 (19)0.29840 (14)0.04574 (11)0.0160 (3)
C130.79035 (19)0.41304 (14)0.10333 (11)0.0157 (3)
H130.92560.43150.09560.019*
C140.64264 (19)0.50033 (14)0.17260 (11)0.0154 (3)
H140.67600.57980.21310.018*
U11U22U33U12U13U23
S0.01960 (16)0.02092 (16)0.01264 (15)0.00527 (13)−0.00323 (12)−0.00443 (12)
Br0.02540 (8)0.02009 (8)0.02847 (8)0.00880 (5)0.00799 (6)−0.00562 (6)
O10.0190 (5)0.0291 (5)0.0137 (4)0.0107 (4)−0.0025 (4)−0.0006 (4)
O20.0192 (5)0.0311 (6)0.0256 (5)0.0075 (4)0.0012 (4)−0.0064 (4)
O30.0329 (6)0.0246 (5)0.0218 (5)0.0078 (4)−0.0055 (4)−0.0115 (4)
N10.0155 (5)0.0186 (5)0.0125 (5)0.0045 (4)−0.0019 (4)−0.0041 (4)
N20.0139 (5)0.0178 (5)0.0127 (5)0.0066 (4)−0.0019 (4)−0.0021 (4)
N30.0230 (6)0.0211 (6)0.0111 (5)0.0081 (5)−0.0022 (4)−0.0024 (4)
C10.0143 (6)0.0139 (6)0.0139 (6)0.0031 (5)0.0016 (5)−0.0022 (5)
C20.0184 (7)0.0199 (7)0.0282 (8)0.0044 (5)−0.0060 (6)−0.0106 (6)
C30.0143 (7)0.0210 (7)0.0409 (9)0.0034 (5)−0.0035 (6)−0.0112 (6)
C40.0198 (7)0.0134 (6)0.0216 (7)0.0039 (5)0.0066 (5)−0.0024 (5)
C50.0259 (7)0.0191 (7)0.0194 (7)0.0051 (6)−0.0044 (6)−0.0066 (5)
C60.0159 (6)0.0217 (7)0.0220 (7)0.0033 (5)−0.0045 (5)−0.0063 (5)
C70.0143 (6)0.0124 (6)0.0142 (6)−0.0009 (5)0.0004 (5)−0.0023 (5)
C80.0170 (6)0.0160 (6)0.0120 (6)0.0019 (5)0.0007 (5)0.0000 (5)
C90.0171 (6)0.0161 (6)0.0087 (5)0.0048 (5)−0.0009 (5)0.0004 (5)
C100.0161 (6)0.0227 (7)0.0149 (6)0.0029 (5)−0.0040 (5)−0.0011 (5)
C110.0232 (7)0.0181 (6)0.0129 (6)0.0029 (5)−0.0045 (5)−0.0036 (5)
C120.0185 (6)0.0170 (6)0.0099 (5)0.0073 (5)−0.0002 (5)−0.0007 (5)
C130.0141 (6)0.0196 (6)0.0123 (6)0.0036 (5)−0.0019 (5)−0.0006 (5)
C140.0183 (6)0.0164 (6)0.0106 (6)0.0031 (5)−0.0025 (5)−0.0017 (5)
S—C71.6683 (13)C9—C141.3948 (18)
Br—C41.9011 (13)C9—C101.3963 (19)
O1—C81.2254 (15)C10—C111.3860 (17)
O2—N31.2316 (15)C11—C121.3882 (19)
O3—N31.2212 (15)C12—C131.3818 (19)
N1—C71.3337 (16)C13—C141.3852 (16)
N1—C11.4226 (15)N1—H010.815 (14)
N2—C81.3763 (17)N2—H020.774 (12)
N2—C71.3938 (15)C2—H20.9500
N3—C121.4751 (15)C3—H30.9500
C1—C21.3848 (19)C5—H50.9500
C1—C61.3898 (19)C6—H60.9500
C2—C31.3903 (18)C10—H100.9500
C3—C41.377 (2)C11—H110.9500
C4—C51.381 (2)C13—H130.9500
C5—C61.3898 (18)C14—H140.9500
C8—C91.4982 (16)
C7—N1—C1127.15 (11)C13—C12—C11122.97 (11)
C8—N2—C7128.71 (11)C13—C12—N3118.24 (11)
O3—N3—O2124.19 (11)C11—C12—N3118.78 (12)
O3—N3—C12118.26 (11)C12—C13—C14118.42 (12)
O2—N3—C12117.54 (11)C13—C14—C9119.91 (12)
C2—C1—C6119.98 (12)C7—N1—H01116.8 (12)
C2—C1—N1117.26 (12)C1—N1—H01114.9 (12)
C6—C1—N1122.66 (12)C8—N2—H02118.6 (11)
C1—C2—C3119.77 (13)C7—N2—H02112.5 (11)
C4—C3—C2119.81 (13)C1—C2—H2120.1
C3—C4—C5121.04 (12)C3—C2—H2120.1
C3—C4—Br118.99 (10)C4—C3—H3120.1
C5—C4—Br119.97 (11)C2—C3—H3120.1
C4—C5—C6119.22 (13)C4—C5—H5120.4
C5—C6—C1120.18 (13)C6—C5—H5120.4
N1—C7—N2115.54 (11)C5—C6—H6119.9
N1—C7—S126.05 (10)C1—C6—H6119.9
N2—C7—S118.38 (9)C11—C10—H10120.0
O1—C8—N2123.94 (12)C9—C10—H10120.0
O1—C8—C9122.94 (12)C10—C11—H11120.9
N2—C8—C9113.11 (11)C12—C11—H11120.9
C14—C9—C10120.52 (11)C12—C13—H13120.8
C14—C9—C8119.93 (12)C14—C13—H13120.8
C10—C9—C8119.54 (12)C13—C14—H14120.0
C11—C10—C9119.96 (12)C9—C14—H14120.0
C10—C11—C12118.15 (12)
C7—N1—C1—C2−140.03 (14)O1—C8—C9—C14130.59 (14)
C7—N1—C1—C643.7 (2)N2—C8—C9—C14−50.80 (16)
C6—C1—C2—C3−0.5 (2)O1—C8—C9—C10−50.40 (18)
N1—C1—C2—C3−176.90 (13)N2—C8—C9—C10128.21 (13)
C1—C2—C3—C4−0.2 (2)C14—C9—C10—C112.54 (19)
C2—C3—C4—C50.6 (2)C8—C9—C10—C11−176.47 (11)
C2—C3—C4—Br−178.99 (11)C9—C10—C11—C12−0.99 (19)
C3—C4—C5—C6−0.3 (2)C10—C11—C12—C13−1.09 (19)
Br—C4—C5—C6179.32 (10)C10—C11—C12—N3178.37 (11)
C4—C5—C6—C1−0.4 (2)O3—N3—C12—C13173.49 (11)
C2—C1—C6—C50.8 (2)O2—N3—C12—C13−5.83 (17)
N1—C1—C6—C5177.03 (12)O3—N3—C12—C11−6.00 (17)
C1—N1—C7—N2−179.75 (12)O2—N3—C12—C11174.68 (12)
C1—N1—C7—S2.0 (2)C11—C12—C13—C141.60 (19)
C8—N2—C7—N1−10.14 (19)N3—C12—C13—C14−177.87 (11)
C8—N2—C7—S168.29 (11)C12—C13—C14—C9−0.02 (18)
C7—N2—C8—O12.3 (2)C10—C9—C14—C13−2.02 (19)
C7—N2—C8—C9−176.27 (12)C8—C9—C14—C13176.98 (11)
D—H···AD—HH···AD···AD—H···A
N1—H01···O10.82 (1)2.03 (2)2.688 (2)138 (2)
N2—H02···Si0.77 (1)2.79 (1)3.553 (1)169 (1)
C5—H5···O3ii0.952.383.293 (2)162
C3—H3···Siii0.952.933.474 (2)118
C14—H14···Si0.952.893.167 (1)98
C14—H14···Briv0.953.153.899 (1)137
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N1—H01⋯O10.82 (1)2.03 (2)2.688 (2)138 (2)
N2—H02⋯Si0.77 (1)2.79 (1)3.553 (1)169 (1)
C5—H5⋯O3ii0.952.383.293 (2)162
C3—H3⋯Siii0.952.933.474 (2)118
C14—H14⋯Si0.952.893.167 (1)98
C14—H14⋯Briv0.953.153.899 (1)137

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .

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