| Literature DB >> 21583565 |
Sohail Saeed, Naghmana Rashid, Arifa Tahir, Peter G Jones.
Abstract
The title compound, C(14)H(10)BrN(3)O(3)S, crystallizes as two concomitant polymorphs that differ in colour (one yellow and one colourless). Only the structure of the colourless form could be determined. The mol-ecule exists in the thio-amide form with an intra-molecular N-H⋯O=C hydrogen bond across the thio-urea system. Mol-ecules are linked into layers parallel to (120) by Br⋯O(nitro) contacts [3.103 (1) Å], classical hydrogen bonds from the other NH function to the S atom and N(nitro)⋯O=C contacts. The layers are linked by weak C-H⋯O(nitro) hydrogen bonds to produce the observed three-dimensional network.Entities:
Year: 2009 PMID: 21583565 PMCID: PMC2977201 DOI: 10.1107/S1600536809025884
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C14H10BrN3O3S | |
| Triclinic, | |
| Hall symbol: -P 1 | Melting point: 454 K |
| Mo | |
| Cell parameters from 13461 reflections | |
| θ = 2.3–31.7° | |
| α = 87.386 (5)° | µ = 2.99 mm−1 |
| β = 75.044 (4)° | |
| γ = 87.511 (4)° | Block, colourless |
| 0.3 × 0.2 × 0.2 mm |
| Oxford Diffraction Xcalibur Eos diffractometer | 4234 independent reflections |
| Radiation source: Enhance (Mo) X-ray Source | 3438 reflections with |
| graphite | |
| Detector resolution: 16.1419 pixels mm-1 | θmax = 30.0°, θmin = 2.3° |
| ω scans | |
| Absorption correction: multi-scan ( | |
| 24890 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 4234 reflections | (Δ/σ)max = 0.002 |
| 207 parameters | Δρmax = 0.81 e Å−3 |
| 2 restraints | Δρmin = −0.79 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes)
are estimated using the full covariance matrix. The cell e.s.d.'s are taken
into account individually in the estimation of e.s.d.'s in distances, angles
and torsion angles; correlations between e.s.d.'s in cell parameters are only
used when they are defined by crystal symmetry. An approximate (isotropic)
treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s.
planes.=============================================================================Short contacts:3.1027 (0.0010) Br - O2_$5 2.9569 (0.0014) N3 - O1_$6176.07 (0.05) C4 - Br - O2_$5 117.45 (0.08) Br - O2_$5 - N3_$5 88.60 (0.07) C12
- N3 - O1_$6 133.52 (0.08) N3 - O1_$6 - C8_$6Operators for generating equivalent atoms: $5 |
| Refinement. Refinement of |
| S | 0.23307 (5) | 0.59552 (4) | 0.59750 (3) | 0.01794 (7) | |
| Br | −0.60756 (2) | 1.070560 (16) | 0.782568 (13) | 0.02754 (5) | |
| O1 | 0.14426 (13) | 0.61950 (11) | 0.23224 (8) | 0.0212 (2) | |
| O2 | 1.06603 (14) | 0.23725 (12) | −0.03589 (9) | 0.0267 (2) | |
| O3 | 0.84622 (15) | 0.09309 (11) | −0.06698 (9) | 0.0266 (2) | |
| N1 | 0.03832 (16) | 0.71824 (12) | 0.44897 (10) | 0.0159 (2) | |
| H01 | 0.015 (2) | 0.7119 (19) | 0.3861 (13) | 0.030 (5)* | |
| N2 | 0.31103 (16) | 0.56699 (12) | 0.37204 (9) | 0.0152 (2) | |
| H02 | 0.4011 (19) | 0.5244 (16) | 0.3860 (13) | 0.015 (4)* | |
| N3 | 0.89393 (17) | 0.20238 (13) | −0.02463 (9) | 0.0190 (2) | |
| C1 | −0.10821 (18) | 0.79834 (14) | 0.53147 (11) | 0.0151 (3) | |
| C2 | −0.3000 (2) | 0.79948 (15) | 0.52021 (13) | 0.0220 (3) | |
| H2 | −0.3305 | 0.7441 | 0.4616 | 0.026* | |
| C3 | −0.4475 (2) | 0.88188 (16) | 0.59493 (14) | 0.0259 (3) | |
| H3 | −0.5792 | 0.8833 | 0.5874 | 0.031* | |
| C4 | −0.4023 (2) | 0.96140 (15) | 0.67991 (12) | 0.0205 (3) | |
| C5 | −0.2115 (2) | 0.96202 (15) | 0.69167 (12) | 0.0217 (3) | |
| H5 | −0.1817 | 1.0176 | 0.7503 | 0.026* | |
| C6 | −0.0636 (2) | 0.88033 (15) | 0.61667 (12) | 0.0199 (3) | |
| H6 | 0.0683 | 0.8805 | 0.6237 | 0.024* | |
| C7 | 0.18736 (18) | 0.63277 (14) | 0.46887 (11) | 0.0143 (2) | |
| C8 | 0.28512 (19) | 0.56083 (14) | 0.26223 (11) | 0.0159 (3) | |
| C9 | 0.44489 (18) | 0.47137 (14) | 0.18279 (10) | 0.0146 (2) | |
| C10 | 0.39423 (19) | 0.35787 (15) | 0.12081 (11) | 0.0180 (3) | |
| H10 | 0.2593 | 0.3415 | 0.1258 | 0.022* | |
| C11 | 0.5409 (2) | 0.26914 (15) | 0.05200 (11) | 0.0181 (3) | |
| H11 | 0.5087 | 0.1905 | 0.0103 | 0.022* | |
| C12 | 0.73630 (19) | 0.29840 (14) | 0.04574 (11) | 0.0160 (3) | |
| C13 | 0.79035 (19) | 0.41304 (14) | 0.10333 (11) | 0.0157 (3) | |
| H13 | 0.9256 | 0.4315 | 0.0956 | 0.019* | |
| C14 | 0.64264 (19) | 0.50033 (14) | 0.17260 (11) | 0.0154 (3) | |
| H14 | 0.6760 | 0.5798 | 0.2131 | 0.018* |
| S | 0.01960 (16) | 0.02092 (16) | 0.01264 (15) | 0.00527 (13) | −0.00323 (12) | −0.00443 (12) |
| Br | 0.02540 (8) | 0.02009 (8) | 0.02847 (8) | 0.00880 (5) | 0.00799 (6) | −0.00562 (6) |
| O1 | 0.0190 (5) | 0.0291 (5) | 0.0137 (4) | 0.0107 (4) | −0.0025 (4) | −0.0006 (4) |
| O2 | 0.0192 (5) | 0.0311 (6) | 0.0256 (5) | 0.0075 (4) | 0.0012 (4) | −0.0064 (4) |
| O3 | 0.0329 (6) | 0.0246 (5) | 0.0218 (5) | 0.0078 (4) | −0.0055 (4) | −0.0115 (4) |
| N1 | 0.0155 (5) | 0.0186 (5) | 0.0125 (5) | 0.0045 (4) | −0.0019 (4) | −0.0041 (4) |
| N2 | 0.0139 (5) | 0.0178 (5) | 0.0127 (5) | 0.0066 (4) | −0.0019 (4) | −0.0021 (4) |
| N3 | 0.0230 (6) | 0.0211 (6) | 0.0111 (5) | 0.0081 (5) | −0.0022 (4) | −0.0024 (4) |
| C1 | 0.0143 (6) | 0.0139 (6) | 0.0139 (6) | 0.0031 (5) | 0.0016 (5) | −0.0022 (5) |
| C2 | 0.0184 (7) | 0.0199 (7) | 0.0282 (8) | 0.0044 (5) | −0.0060 (6) | −0.0106 (6) |
| C3 | 0.0143 (7) | 0.0210 (7) | 0.0409 (9) | 0.0034 (5) | −0.0035 (6) | −0.0112 (6) |
| C4 | 0.0198 (7) | 0.0134 (6) | 0.0216 (7) | 0.0039 (5) | 0.0066 (5) | −0.0024 (5) |
| C5 | 0.0259 (7) | 0.0191 (7) | 0.0194 (7) | 0.0051 (6) | −0.0044 (6) | −0.0066 (5) |
| C6 | 0.0159 (6) | 0.0217 (7) | 0.0220 (7) | 0.0033 (5) | −0.0045 (5) | −0.0063 (5) |
| C7 | 0.0143 (6) | 0.0124 (6) | 0.0142 (6) | −0.0009 (5) | 0.0004 (5) | −0.0023 (5) |
| C8 | 0.0170 (6) | 0.0160 (6) | 0.0120 (6) | 0.0019 (5) | 0.0007 (5) | 0.0000 (5) |
| C9 | 0.0171 (6) | 0.0161 (6) | 0.0087 (5) | 0.0048 (5) | −0.0009 (5) | 0.0004 (5) |
| C10 | 0.0161 (6) | 0.0227 (7) | 0.0149 (6) | 0.0029 (5) | −0.0040 (5) | −0.0011 (5) |
| C11 | 0.0232 (7) | 0.0181 (6) | 0.0129 (6) | 0.0029 (5) | −0.0045 (5) | −0.0036 (5) |
| C12 | 0.0185 (6) | 0.0170 (6) | 0.0099 (5) | 0.0073 (5) | −0.0002 (5) | −0.0007 (5) |
| C13 | 0.0141 (6) | 0.0196 (6) | 0.0123 (6) | 0.0036 (5) | −0.0019 (5) | −0.0006 (5) |
| C14 | 0.0183 (6) | 0.0164 (6) | 0.0106 (6) | 0.0031 (5) | −0.0025 (5) | −0.0017 (5) |
| S—C7 | 1.6683 (13) | C9—C14 | 1.3948 (18) |
| Br—C4 | 1.9011 (13) | C9—C10 | 1.3963 (19) |
| O1—C8 | 1.2254 (15) | C10—C11 | 1.3860 (17) |
| O2—N3 | 1.2316 (15) | C11—C12 | 1.3882 (19) |
| O3—N3 | 1.2212 (15) | C12—C13 | 1.3818 (19) |
| N1—C7 | 1.3337 (16) | C13—C14 | 1.3852 (16) |
| N1—C1 | 1.4226 (15) | N1—H01 | 0.815 (14) |
| N2—C8 | 1.3763 (17) | N2—H02 | 0.774 (12) |
| N2—C7 | 1.3938 (15) | C2—H2 | 0.9500 |
| N3—C12 | 1.4751 (15) | C3—H3 | 0.9500 |
| C1—C2 | 1.3848 (19) | C5—H5 | 0.9500 |
| C1—C6 | 1.3898 (19) | C6—H6 | 0.9500 |
| C2—C3 | 1.3903 (18) | C10—H10 | 0.9500 |
| C3—C4 | 1.377 (2) | C11—H11 | 0.9500 |
| C4—C5 | 1.381 (2) | C13—H13 | 0.9500 |
| C5—C6 | 1.3898 (18) | C14—H14 | 0.9500 |
| C8—C9 | 1.4982 (16) | ||
| C7—N1—C1 | 127.15 (11) | C13—C12—C11 | 122.97 (11) |
| C8—N2—C7 | 128.71 (11) | C13—C12—N3 | 118.24 (11) |
| O3—N3—O2 | 124.19 (11) | C11—C12—N3 | 118.78 (12) |
| O3—N3—C12 | 118.26 (11) | C12—C13—C14 | 118.42 (12) |
| O2—N3—C12 | 117.54 (11) | C13—C14—C9 | 119.91 (12) |
| C2—C1—C6 | 119.98 (12) | C7—N1—H01 | 116.8 (12) |
| C2—C1—N1 | 117.26 (12) | C1—N1—H01 | 114.9 (12) |
| C6—C1—N1 | 122.66 (12) | C8—N2—H02 | 118.6 (11) |
| C1—C2—C3 | 119.77 (13) | C7—N2—H02 | 112.5 (11) |
| C4—C3—C2 | 119.81 (13) | C1—C2—H2 | 120.1 |
| C3—C4—C5 | 121.04 (12) | C3—C2—H2 | 120.1 |
| C3—C4—Br | 118.99 (10) | C4—C3—H3 | 120.1 |
| C5—C4—Br | 119.97 (11) | C2—C3—H3 | 120.1 |
| C4—C5—C6 | 119.22 (13) | C4—C5—H5 | 120.4 |
| C5—C6—C1 | 120.18 (13) | C6—C5—H5 | 120.4 |
| N1—C7—N2 | 115.54 (11) | C5—C6—H6 | 119.9 |
| N1—C7—S | 126.05 (10) | C1—C6—H6 | 119.9 |
| N2—C7—S | 118.38 (9) | C11—C10—H10 | 120.0 |
| O1—C8—N2 | 123.94 (12) | C9—C10—H10 | 120.0 |
| O1—C8—C9 | 122.94 (12) | C10—C11—H11 | 120.9 |
| N2—C8—C9 | 113.11 (11) | C12—C11—H11 | 120.9 |
| C14—C9—C10 | 120.52 (11) | C12—C13—H13 | 120.8 |
| C14—C9—C8 | 119.93 (12) | C14—C13—H13 | 120.8 |
| C10—C9—C8 | 119.54 (12) | C13—C14—H14 | 120.0 |
| C11—C10—C9 | 119.96 (12) | C9—C14—H14 | 120.0 |
| C10—C11—C12 | 118.15 (12) | ||
| C7—N1—C1—C2 | −140.03 (14) | O1—C8—C9—C14 | 130.59 (14) |
| C7—N1—C1—C6 | 43.7 (2) | N2—C8—C9—C14 | −50.80 (16) |
| C6—C1—C2—C3 | −0.5 (2) | O1—C8—C9—C10 | −50.40 (18) |
| N1—C1—C2—C3 | −176.90 (13) | N2—C8—C9—C10 | 128.21 (13) |
| C1—C2—C3—C4 | −0.2 (2) | C14—C9—C10—C11 | 2.54 (19) |
| C2—C3—C4—C5 | 0.6 (2) | C8—C9—C10—C11 | −176.47 (11) |
| C2—C3—C4—Br | −178.99 (11) | C9—C10—C11—C12 | −0.99 (19) |
| C3—C4—C5—C6 | −0.3 (2) | C10—C11—C12—C13 | −1.09 (19) |
| Br—C4—C5—C6 | 179.32 (10) | C10—C11—C12—N3 | 178.37 (11) |
| C4—C5—C6—C1 | −0.4 (2) | O3—N3—C12—C13 | 173.49 (11) |
| C2—C1—C6—C5 | 0.8 (2) | O2—N3—C12—C13 | −5.83 (17) |
| N1—C1—C6—C5 | 177.03 (12) | O3—N3—C12—C11 | −6.00 (17) |
| C1—N1—C7—N2 | −179.75 (12) | O2—N3—C12—C11 | 174.68 (12) |
| C1—N1—C7—S | 2.0 (2) | C11—C12—C13—C14 | 1.60 (19) |
| C8—N2—C7—N1 | −10.14 (19) | N3—C12—C13—C14 | −177.87 (11) |
| C8—N2—C7—S | 168.29 (11) | C12—C13—C14—C9 | −0.02 (18) |
| C7—N2—C8—O1 | 2.3 (2) | C10—C9—C14—C13 | −2.02 (19) |
| C7—N2—C8—C9 | −176.27 (12) | C8—C9—C14—C13 | 176.98 (11) |
| H··· | ||||
| N1—H01···O1 | 0.82 (1) | 2.03 (2) | 2.688 (2) | 138 (2) |
| N2—H02···Si | 0.77 (1) | 2.79 (1) | 3.553 (1) | 169 (1) |
| C5—H5···O3ii | 0.95 | 2.38 | 3.293 (2) | 162 |
| C3—H3···Siii | 0.95 | 2.93 | 3.474 (2) | 118 |
| C14—H14···Si | 0.95 | 2.89 | 3.167 (1) | 98 |
| C14—H14···Briv | 0.95 | 3.15 | 3.899 (1) | 137 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N1—H01⋯O1 | 0.82 (1) | 2.03 (2) | 2.688 (2) | 138 (2) |
| N2—H02⋯Si | 0.77 (1) | 2.79 (1) | 3.553 (1) | 169 (1) |
| C5—H5⋯O3ii | 0.95 | 2.38 | 3.293 (2) | 162 |
| C3—H3⋯Siii | 0.95 | 2.93 | 3.474 (2) | 118 |
| C14—H14⋯Si | 0.95 | 2.89 | 3.167 (1) | 98 |
| C14—H14⋯Briv | 0.95 | 3.15 | 3.899 (1) | 137 |
Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .