| Literature DB >> 23125680 |
Durga P Singh1, Seema Pratap, Sushil K Gupta, Ray J Butcher.
Abstract
In the title compound, C(16)H(12)N(2)OS(2), the dihedral angles between the mean planes of the central thio-urea core and the thio-phene ring and the naphthalene ring system are 1.8 (2) and 6.45 (18)°, respectively. The mol-ecule adopts a trans-cis conformation with respect to the position of thio-phenoyl and naphthyl groups relative to the S atom across the thiourea C-N bonds. Both the thio-phene ring and the sulfanyl-idene S atom are disordered over two sets of sites with occupancies of 0.862 (3):0.138 (3) and 0.977 (3):0.023 (3), respectively. An intra-molecular N-H⋯O hydrogen bond is observed. The crystal packing features two N-H⋯S hydrogen bonds.Entities:
Year: 2012 PMID: 23125680 PMCID: PMC3470236 DOI: 10.1107/S1600536812035350
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C16H12N2OS2 | |
| Monoclinic, | Mo |
| Cell parameters from 1174 reflections | |
| θ = 3.3–27.3° | |
| µ = 0.36 mm−1 | |
| β = 104.030 (14)° | |
| Prism, colorless | |
| 0.35 × 0.25 × 0.15 mm |
| Oxford Diffraction Xcalibur Eos diffractometer | 2625 independent reflections |
| Radiation source: Enhance (Mo) X-ray Source | 1626 reflections with |
| Graphite monochromator | |
| Detector resolution: 16.0938 pixels mm-1 | θmax = 25.5°, θmin = 3.7° |
| ω scans | |
| Absorption correction: multi-scan ( | |
| 4822 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 2625 reflections | (Δ/σ)max < 0.001 |
| 210 parameters | Δρmax = 0.33 e Å−3 |
| 10 restraints | Δρmin = −0.31 e Å−3 |
| Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
| Refinement. Refinement of |
| Occ. (<1) | |||||
| S1A | 0.962 (3) | 0.732 (11) | 0.421 (4) | 0.0764 (5) | 0.023 (3) |
| S1B | 0.98334 (7) | 0.6323 (3) | 0.38685 (9) | 0.0764 (5) | 0.977 (3) |
| S2A | 0.66455 (8) | −0.0348 (2) | 0.46547 (8) | 0.0582 (4) | 0.862 (3) |
| C13A | 0.7707 (3) | 0.0902 (7) | 0.4715 (3) | 0.0404 (11) | 0.862 (3) |
| C14A | 0.8378 (4) | −0.0413 (13) | 0.5210 (5) | 0.0655 (19) | 0.862 (3) |
| H14A | 0.9018 | −0.0083 | 0.5310 | 0.079* | 0.862 (3) |
| C15A | 0.8041 (4) | −0.2228 (11) | 0.5543 (4) | 0.0655 (15) | 0.862 (3) |
| H15A | 0.8419 | −0.3270 | 0.5900 | 0.079* | 0.862 (3) |
| C16A | 0.7114 (4) | −0.2380 (12) | 0.5309 (6) | 0.0695 (14) | 0.862 (3) |
| H16A | 0.6765 | −0.3515 | 0.5496 | 0.083* | 0.862 (3) |
| S2B | 0.8612 (8) | −0.036 (2) | 0.5239 (9) | 0.0582 (4) | 0.138 (3) |
| C13B | 0.7593 (17) | 0.051 (5) | 0.4590 (19) | 0.0404 (11) | 0.138 (3) |
| C14B | 0.6895 (17) | −0.046 (5) | 0.488 (2) | 0.0655 (19) | 0.138 (3) |
| H14B | 0.6294 | 0.0174 | 0.4803 | 0.079* | 0.138 (3) |
| C15B | 0.716 (2) | −0.242 (7) | 0.530 (4) | 0.0655 (15) | 0.138 (3) |
| H15B | 0.6767 | −0.3658 | 0.5338 | 0.079* | 0.138 (3) |
| C16B | 0.807 (2) | −0.233 (7) | 0.566 (3) | 0.0695 (14) | 0.138 (3) |
| H16B | 0.8373 | −0.3273 | 0.6097 | 0.083* | 0.138 (3) |
| O1 | 0.69721 (14) | 0.3590 (3) | 0.37691 (14) | 0.0546 (6) | |
| N1 | 0.79871 (16) | 0.6726 (4) | 0.33310 (16) | 0.0440 (7) | |
| H1A | 0.7462 | 0.6094 | 0.3360 | 0.053* | |
| N2 | 0.85320 (16) | 0.3884 (4) | 0.42315 (16) | 0.0452 (7) | |
| H2A | 0.9009 | 0.3300 | 0.4579 | 0.054* | |
| C1 | 0.7879 (2) | 0.8627 (5) | 0.28085 (19) | 0.0432 (8) | |
| C2 | 0.8584 (2) | 1.0074 (5) | 0.2753 (2) | 0.0541 (9) | |
| H2 | 0.9196 | 0.9774 | 0.3054 | 0.065* | |
| C3 | 0.8401 (3) | 1.1985 (5) | 0.2255 (2) | 0.0585 (10) | |
| H3 | 0.8894 | 1.2973 | 0.2223 | 0.070* | |
| C4 | 0.7537 (3) | 1.2454 (5) | 0.1817 (2) | 0.0570 (9) | |
| H4 | 0.7429 | 1.3778 | 0.1492 | 0.068* | |
| C5 | 0.6798 (2) | 1.0997 (5) | 0.1838 (2) | 0.0468 (8) | |
| C6 | 0.5901 (3) | 1.1427 (6) | 0.1368 (2) | 0.0594 (10) | |
| H6 | 0.5788 | 1.2741 | 0.1038 | 0.071* | |
| C7 | 0.5189 (3) | 0.9981 (6) | 0.1379 (2) | 0.0659 (11) | |
| H7 | 0.4587 | 1.0297 | 0.1060 | 0.079* | |
| C8 | 0.5347 (2) | 0.8048 (6) | 0.1857 (2) | 0.0574 (10) | |
| H8 | 0.4851 | 0.7044 | 0.1859 | 0.069* | |
| C9 | 0.6200 (2) | 0.7578 (5) | 0.2319 (2) | 0.0494 (9) | |
| H9 | 0.6291 | 0.6249 | 0.2642 | 0.059* | |
| C10 | 0.6962 (2) | 0.9031 (5) | 0.23326 (19) | 0.0416 (8) | |
| C11 | 0.8727 (2) | 0.5719 (5) | 0.37841 (19) | 0.0434 (8) | |
| C12 | 0.7696 (2) | 0.2864 (5) | 0.4203 (2) | 0.0433 (8) |
| S1A | 0.0282 (5) | 0.1166 (10) | 0.0801 (9) | −0.0049 (6) | 0.0048 (5) | 0.0291 (8) |
| S1B | 0.0282 (5) | 0.1166 (10) | 0.0801 (9) | −0.0049 (6) | 0.0048 (5) | 0.0291 (8) |
| S2A | 0.0543 (7) | 0.0566 (6) | 0.0598 (9) | −0.0107 (6) | 0.0061 (5) | 0.0071 (6) |
| C13A | 0.0405 (19) | 0.035 (2) | 0.041 (2) | −0.0003 (16) | 0.0015 (16) | −0.0068 (18) |
| C14A | 0.057 (4) | 0.064 (3) | 0.077 (4) | 0.000 (3) | 0.020 (4) | −0.010 (2) |
| C15A | 0.091 (4) | 0.048 (2) | 0.051 (3) | 0.023 (3) | 0.004 (3) | 0.006 (2) |
| C16A | 0.090 (4) | 0.053 (3) | 0.063 (3) | −0.015 (3) | 0.015 (3) | 0.002 (2) |
| S2B | 0.0543 (7) | 0.0566 (6) | 0.0598 (9) | −0.0107 (6) | 0.0061 (5) | 0.0071 (6) |
| C13B | 0.0405 (19) | 0.035 (2) | 0.041 (2) | −0.0003 (16) | 0.0015 (16) | −0.0068 (18) |
| C14B | 0.057 (4) | 0.064 (3) | 0.077 (4) | 0.000 (3) | 0.020 (4) | −0.010 (2) |
| C15B | 0.091 (4) | 0.048 (2) | 0.051 (3) | 0.023 (3) | 0.004 (3) | 0.006 (2) |
| C16B | 0.090 (4) | 0.053 (3) | 0.063 (3) | −0.015 (3) | 0.015 (3) | 0.002 (2) |
| O1 | 0.0340 (12) | 0.0537 (13) | 0.0694 (16) | −0.0034 (10) | −0.0006 (11) | 0.0150 (12) |
| N1 | 0.0286 (13) | 0.0453 (14) | 0.0541 (17) | −0.0030 (11) | 0.0021 (12) | 0.0007 (13) |
| N2 | 0.0302 (13) | 0.0547 (15) | 0.0472 (16) | 0.0030 (12) | 0.0026 (11) | 0.0113 (13) |
| C1 | 0.0381 (17) | 0.0383 (15) | 0.0503 (19) | −0.0019 (14) | 0.0050 (14) | −0.0047 (14) |
| C2 | 0.0455 (19) | 0.0503 (18) | 0.067 (2) | −0.0095 (16) | 0.0136 (17) | −0.0035 (17) |
| C3 | 0.063 (2) | 0.0504 (18) | 0.068 (2) | −0.0188 (18) | 0.0281 (19) | −0.0075 (18) |
| C4 | 0.072 (2) | 0.0452 (17) | 0.059 (2) | −0.0030 (19) | 0.0254 (19) | 0.0032 (16) |
| C5 | 0.0516 (19) | 0.0406 (16) | 0.050 (2) | 0.0058 (16) | 0.0165 (16) | −0.0023 (15) |
| C6 | 0.062 (2) | 0.057 (2) | 0.059 (2) | 0.0175 (19) | 0.0146 (19) | 0.0156 (18) |
| C7 | 0.051 (2) | 0.075 (2) | 0.067 (3) | 0.018 (2) | 0.0062 (19) | 0.017 (2) |
| C8 | 0.0409 (19) | 0.064 (2) | 0.065 (2) | 0.0007 (17) | 0.0078 (17) | 0.0111 (19) |
| C9 | 0.0421 (18) | 0.0506 (17) | 0.052 (2) | −0.0010 (16) | 0.0044 (15) | 0.0080 (16) |
| C10 | 0.0387 (17) | 0.0380 (15) | 0.0477 (19) | 0.0024 (14) | 0.0092 (14) | −0.0061 (14) |
| C11 | 0.0342 (16) | 0.0593 (18) | 0.0356 (17) | −0.0004 (15) | 0.0065 (13) | 0.0002 (15) |
| C12 | 0.0322 (16) | 0.0423 (16) | 0.0513 (19) | 0.0028 (14) | 0.0023 (14) | −0.0017 (15) |
| S1A—C11 | 1.65 (5) | N1—H1A | 0.8800 |
| S1B—C11 | 1.661 (3) | N2—C12 | 1.376 (4) |
| S2A—C16A | 1.674 (6) | N2—C11 | 1.397 (4) |
| S2A—C13A | 1.729 (4) | N2—H2A | 0.8800 |
| C13A—C14A | 1.383 (7) | C1—C2 | 1.377 (4) |
| C13A—C12 | 1.449 (5) | C1—C10 | 1.432 (4) |
| C14A—C15A | 1.365 (8) | C2—C3 | 1.401 (5) |
| C14A—H14A | 0.9500 | C2—H2 | 0.9500 |
| C15A—C16A | 1.347 (6) | C3—C4 | 1.353 (5) |
| C15A—H15A | 0.9500 | C3—H3 | 0.9500 |
| C16A—H16A | 0.9500 | C4—C5 | 1.408 (5) |
| S2B—C16B | 1.67 (2) | C4—H4 | 0.9500 |
| S2B—C13B | 1.728 (19) | C5—C6 | 1.407 (4) |
| C13B—C14B | 1.39 (2) | C5—C10 | 1.422 (4) |
| C13B—C12 | 1.56 (3) | C6—C7 | 1.367 (5) |
| C14B—C15B | 1.37 (2) | C6—H6 | 0.9500 |
| C14B—H14B | 0.9500 | C7—C8 | 1.390 (5) |
| C15B—C16B | 1.350 (18) | C7—H7 | 0.9500 |
| C15B—H15B | 0.9500 | C8—C9 | 1.354 (4) |
| C16B—H16B | 0.9500 | C8—H8 | 0.9500 |
| O1—C12 | 1.230 (3) | C9—C10 | 1.421 (4) |
| N1—C11 | 1.326 (4) | C9—H9 | 0.9500 |
| N1—C1 | 1.419 (4) | ||
| C16A—S2A—C13A | 92.2 (2) | C3—C2—H2 | 119.9 |
| C14A—C13A—C12 | 136.0 (5) | C4—C3—C2 | 121.3 (3) |
| C14A—C13A—S2A | 108.3 (4) | C4—C3—H3 | 119.3 |
| C12—C13A—S2A | 115.4 (3) | C2—C3—H3 | 119.3 |
| C15A—C14A—C13A | 114.2 (5) | C3—C4—C5 | 120.6 (3) |
| C15A—C14A—H14A | 122.9 | C3—C4—H4 | 119.7 |
| C13A—C14A—H14A | 122.9 | C5—C4—H4 | 119.7 |
| C16A—C15A—C14A | 112.6 (5) | C4—C5—C6 | 121.3 (3) |
| C16A—C15A—H15A | 123.7 | C4—C5—C10 | 119.4 (3) |
| C14A—C15A—H15A | 123.7 | C6—C5—C10 | 119.3 (3) |
| C15A—C16A—S2A | 112.5 (5) | C7—C6—C5 | 121.0 (3) |
| C15A—C16A—H16A | 123.7 | C7—C6—H6 | 119.5 |
| S2A—C16A—H16A | 123.7 | C5—C6—H6 | 119.5 |
| C16B—S2B—C13B | 92.5 (12) | C6—C7—C8 | 119.9 (3) |
| C14B—C13B—C12 | 133 (2) | C6—C7—H7 | 120.0 |
| C14B—C13B—S2B | 105.6 (15) | C8—C7—H7 | 120.0 |
| C12—C13B—S2B | 112.0 (16) | C9—C8—C7 | 120.8 (3) |
| C15B—C14B—C13B | 113 (2) | C9—C8—H8 | 119.6 |
| C15B—C14B—H14B | 123.6 | C7—C8—H8 | 119.6 |
| C13B—C14B—H14B | 123.6 | C8—C9—C10 | 121.4 (3) |
| C16B—C15B—C14B | 110 (2) | C8—C9—H9 | 119.3 |
| C16B—C15B—H15B | 125.2 | C10—C9—H9 | 119.3 |
| C14B—C15B—H15B | 125.2 | C9—C10—C5 | 117.5 (3) |
| C15B—C16B—S2B | 112 (2) | C9—C10—C1 | 124.0 (3) |
| C15B—C16B—H16B | 124.2 | C5—C10—C1 | 118.5 (3) |
| S2B—C16B—H16B | 124.2 | N1—C11—N2 | 114.4 (3) |
| C11—N1—C1 | 132.4 (3) | N1—C11—S1A | 118 (2) |
| C11—N1—H1A | 113.8 | N2—C11—S1A | 117.1 (18) |
| C1—N1—H1A | 113.8 | N1—C11—S1B | 128.6 (3) |
| C12—N2—C11 | 128.9 (2) | N2—C11—S1B | 117.0 (2) |
| C12—N2—H2A | 115.5 | S1A—C11—S1B | 33 (3) |
| C11—N2—H2A | 115.5 | O1—C12—N2 | 121.7 (3) |
| C2—C1—N1 | 124.2 (3) | O1—C12—C13A | 121.5 (3) |
| C2—C1—C10 | 119.9 (3) | N2—C12—C13A | 116.8 (3) |
| N1—C1—C10 | 115.9 (3) | O1—C12—C13B | 113.8 (9) |
| C1—C2—C3 | 120.2 (3) | N2—C12—C13B | 123.8 (9) |
| C1—C2—H2 | 119.9 | C13A—C12—C13B | 11.9 (13) |
| C16A—S2A—C13A—C14A | 3.3 (6) | C4—C5—C10—C9 | −178.4 (3) |
| C16A—S2A—C13A—C12 | 178.1 (5) | C6—C5—C10—C9 | 0.4 (5) |
| C12—C13A—C14A—C15A | −176.1 (6) | C4—C5—C10—C1 | 1.4 (4) |
| S2A—C13A—C14A—C15A | −2.9 (8) | C6—C5—C10—C1 | −179.8 (3) |
| C13A—C14A—C15A—C16A | 0.8 (11) | C2—C1—C10—C9 | 176.9 (3) |
| C14A—C15A—C16A—S2A | 1.9 (11) | N1—C1—C10—C9 | −4.5 (5) |
| C13A—S2A—C16A—C15A | −3.0 (8) | C2—C1—C10—C5 | −2.8 (5) |
| C16B—S2B—C13B—C14B | 13 (4) | N1—C1—C10—C5 | 175.8 (3) |
| C16B—S2B—C13B—C12 | 164 (3) | C1—N1—C11—N2 | 178.7 (3) |
| C12—C13B—C14B—C15B | −169 (4) | C1—N1—C11—S1A | 35 (3) |
| S2B—C13B—C14B—C15B | −27 (5) | C1—N1—C11—S1B | −2.6 (5) |
| C13B—C14B—C15B—C16B | 30 (6) | C12—N2—C11—N1 | 7.1 (5) |
| C14B—C15B—C16B—S2B | −19 (7) | C12—N2—C11—S1A | 151 (3) |
| C13B—S2B—C16B—C15B | 3 (5) | C12—N2—C11—S1B | −171.6 (3) |
| C11—N1—C1—C2 | −9.6 (5) | C11—N2—C12—O1 | −3.4 (5) |
| C11—N1—C1—C10 | 171.8 (3) | C11—N2—C12—C13A | 177.1 (3) |
| N1—C1—C2—C3 | −176.2 (3) | C11—N2—C12—C13B | 165.9 (17) |
| C10—C1—C2—C3 | 2.3 (5) | C14A—C13A—C12—O1 | 174.0 (6) |
| C1—C2—C3—C4 | −0.2 (5) | S2A—C13A—C12—O1 | 1.2 (5) |
| C2—C3—C4—C5 | −1.3 (5) | C14A—C13A—C12—N2 | −6.5 (8) |
| C3—C4—C5—C6 | −178.1 (3) | S2A—C13A—C12—N2 | −179.4 (3) |
| C3—C4—C5—C10 | 0.7 (5) | C14A—C13A—C12—C13B | 122 (7) |
| C4—C5—C6—C7 | 178.6 (4) | S2A—C13A—C12—C13B | −51 (6) |
| C10—C5—C6—C7 | −0.2 (5) | C14B—C13B—C12—O1 | −36 (4) |
| C5—C6—C7—C8 | −0.3 (6) | S2B—C13B—C12—O1 | −176.6 (15) |
| C6—C7—C8—C9 | 0.4 (6) | C14B—C13B—C12—N2 | 154 (3) |
| C7—C8—C9—C10 | −0.2 (5) | S2B—C13B—C12—N2 | 13 (3) |
| C8—C9—C10—C5 | −0.3 (5) | C14B—C13B—C12—C13A | 96 (9) |
| C8—C9—C10—C1 | 180.0 (3) | S2B—C13B—C12—C13A | −44 (5) |
| H··· | ||||
| N1—H1 | 0.88 | 1.86 | 2.615 (3) | 143 |
| N2—H2 | 0.88 | 2.57 | 3.026 (14) | 113 |
| N2—H2 | 0.88 | 2.56 | 3.41 (4) | 164 |
| N2—H2 | 0.88 | 2.80 | 3.557 (3) | 145 |
Hydrogen-bond geometry (Å, °)
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| N1—H1 | 0.88 | 1.86 | 2.615 (3) | 143 |
| N2—H2 | 0.88 | 2.57 | 3.026 (14) | 113 |
| N2—H2 | 0.88 | 2.56 | 3.41 (4) | 164 |
| N2—H2 | 0.88 | 2.80 | 3.557 (3) | 145 |
Symmetry code: (i) .