Literature DB >> 21202959

4,4'-[Propane-1,3-diylbis(nitrilo-methyl-idyne)]dibenzonitrile.

Hoong-Kun Fun, Reza Kia, Hadi Kargar.   

Abstract

The mol-ecule of the title Schiff base compound, C(19)H(16)N(4), has crystallographic twofold rotation symmetry. The imino group is coplanar with the aromatic ring. Within the mol-ecule, the planar units are parallel, but extend in opposite directions from the central methyl-ene bridge. The packing of the mol-ecules is controlled by C-H⋯π inter-actions.

Entities:  

Year:  2008        PMID: 21202959      PMCID: PMC2961763          DOI: 10.1107/S1600536808018680

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For values of bond lengths, see Allen et al. (1987 ▶). For related structures, see: Li et al. (2005 ▶); Bomfim et al. (2005 ▶); Glidewell et al. (2005 ▶, 2006 ▶); Sun et al. (2004 ▶); Habibi et al. (2007 ▶).

Experimental

Crystal data

C19H16N4 M = 300.36 Monoclinic, a = 14.4982 (4) Å b = 6.9025 (2) Å c = 16.9842 (6) Å β = 111.659 (4)° V = 1579.67 (8) Å3 Z = 4 Mo Kα radiation μ = 0.08 mm−1 T = 100.0 (1) K 0.37 × 0.12 × 0.12 mm

Data collection

Bruker SMART APEXII CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2005 ▶) T min = 0.886, T max = 0.991 13317 measured reflections 1544 independent reflections 1257 reflections with I > 2σ(I) R int = 0.077

Refinement

R[F 2 > 2σ(F 2)] = 0.081 wR(F 2) = 0.127 S = 1.17 1544 reflections 109 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.18 e Å−3 Δρmin = −0.37 e Å−3 Data collection: APEX2 (Bruker, 2005 ▶); cell refinement: APEX2; data reduction: SAINT (Bruker, 2005 ▶); program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL and PLATON (Spek, 2003 ▶). Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536808018680/tk2276sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536808018680/tk2276Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C19H16N4F000 = 632
Mr = 300.36Dx = 1.263 Mg m3
Monoclinic, C2/cMo Kα radiation λ = 0.71073 Å
Hall symbol: -C 2ycCell parameters from 2928 reflections
a = 14.4982 (4) Åθ = 3.0–30.0º
b = 6.9025 (2) ŵ = 0.08 mm1
c = 16.9842 (6) ÅT = 100.0 (1) K
β = 111.659 (4)ºNeedle, colourless
V = 1579.67 (8) Å30.37 × 0.12 × 0.12 mm
Z = 4
Bruker SMART APEXII CCD area-detector diffractometer1544 independent reflections
Radiation source: fine-focus sealed tube1257 reflections with I > 2σ(I)
Monochromator: graphiteRint = 0.077
T = 100(1) Kθmax = 26.0º
φ and ω scansθmin = 2.6º
Absorption correction: multi-scan(SADABS; Bruker, 2005)h = −17→17
Tmin = 0.886, Tmax = 0.991k = −8→8
13317 measured reflectionsl = −20→20
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.081H atoms treated by a mixture of independent and constrained refinement
wR(F2) = 0.127  w = 1/[σ2(Fo2) + (0.0132P)2 + 5.0812P] where P = (Fo2 + 2Fc2)/3
S = 1.17(Δ/σ)max < 0.001
1544 reflectionsΔρmax = 0.18 e Å3
109 parametersΔρmin = −0.37 e Å3
Primary atom site location: structure-invariant direct methodsExtinction correction: none
Experimental. The low-temperature data was collected with the Oxford Cyrosystem Cobra low-temperature attachment.
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
N10.14554 (16)0.8098 (3)0.29318 (13)0.0173 (5)
N20.5053 (2)0.1024 (4)0.59762 (16)0.0373 (7)
C10.29164 (19)0.6045 (4)0.43213 (16)0.0193 (6)
H1A0.28690.73700.43970.023*
C20.3625 (2)0.4975 (4)0.49323 (16)0.0211 (6)
H2A0.40520.55740.54220.025*
C30.3701 (2)0.2986 (4)0.48155 (17)0.0192 (6)
C40.3064 (2)0.2085 (4)0.40896 (17)0.0203 (6)
H4A0.31160.07610.40120.024*
C50.23520 (19)0.3172 (4)0.34838 (17)0.0183 (6)
H5A0.19210.25700.29970.022*
C60.22689 (19)0.5159 (4)0.35906 (16)0.0161 (6)
C70.15182 (19)0.6273 (4)0.29081 (17)0.0183 (6)
H7A0.10770.56090.24460.022*
C80.06898 (19)0.9029 (4)0.22061 (16)0.0185 (6)
H8A0.03100.80470.18110.022*
H8B0.10020.98550.19150.022*
C90.00001.0233 (6)0.25000.0162 (8)
C100.4454 (2)0.1869 (4)0.54596 (18)0.0262 (7)
H9A0.0367 (18)1.110 (4)0.2938 (15)0.015 (7)*
U11U22U33U12U13U23
N10.0147 (12)0.0211 (13)0.0155 (11)0.0035 (10)0.0049 (9)0.0024 (10)
N20.0446 (17)0.0425 (17)0.0235 (14)0.0218 (15)0.0109 (13)0.0090 (13)
C10.0215 (15)0.0158 (14)0.0217 (14)0.0001 (12)0.0091 (12)−0.0019 (12)
C20.0220 (15)0.0242 (16)0.0142 (13)0.0027 (12)0.0034 (12)−0.0020 (12)
C30.0193 (14)0.0227 (15)0.0199 (14)0.0046 (12)0.0121 (12)0.0049 (12)
C40.0246 (15)0.0151 (14)0.0268 (15)0.0011 (12)0.0162 (13)0.0015 (12)
C50.0167 (14)0.0191 (15)0.0198 (14)−0.0056 (11)0.0075 (12)−0.0058 (11)
C60.0150 (14)0.0202 (15)0.0165 (13)0.0008 (11)0.0097 (11)0.0004 (11)
C70.0135 (14)0.0229 (16)0.0177 (14)−0.0030 (11)0.0048 (11)−0.0025 (11)
C80.0156 (13)0.0236 (15)0.0159 (13)0.0031 (12)0.0052 (11)0.0001 (12)
C90.0144 (19)0.015 (2)0.0174 (19)0.0000.0042 (16)0.000
C100.0330 (17)0.0270 (17)0.0206 (15)0.0072 (14)0.0123 (14)0.0013 (13)
N1—C71.264 (3)C4—H4A0.9300
N1—C81.468 (3)C5—C61.395 (4)
N2—C101.141 (4)C5—H5A0.9300
C1—C21.375 (4)C6—C71.479 (4)
C1—C61.391 (4)C7—H7A0.9300
C1—H1A0.9300C8—C91.519 (3)
C2—C31.398 (4)C8—H8A0.9700
C2—H2A0.9300C8—H8B0.9700
C3—C41.386 (4)C9—C8i1.519 (3)
C3—C101.450 (4)C9—H9A0.95 (3)
C4—C51.380 (4)
C7—N1—C8116.8 (2)C1—C6—C5119.1 (3)
C2—C1—C6120.5 (3)C1—C6—C7122.0 (2)
C2—C1—H1A119.7C5—C6—C7118.9 (2)
C6—C1—H1A119.7N1—C7—C6122.3 (3)
C1—C2—C3119.8 (3)N1—C7—H7A118.9
C1—C2—H2A120.1C6—C7—H7A118.9
C3—C2—H2A120.1N1—C8—C9110.43 (19)
C4—C3—C2120.4 (3)N1—C8—H8A109.6
C4—C3—C10120.1 (3)C9—C8—H8A109.6
C2—C3—C10119.5 (3)N1—C8—H8B109.6
C5—C4—C3119.3 (3)C9—C8—H8B109.6
C5—C4—H4A120.4H8A—C8—H8B108.1
C3—C4—H4A120.4C8—C9—C8i113.7 (3)
C4—C5—C6121.0 (3)C8—C9—H9A110.8 (15)
C4—C5—H5A119.5C8i—C9—H9A109.5 (15)
C6—C5—H5A119.5N2—C10—C3178.6 (4)
C6—C1—C2—C30.5 (4)C4—C5—C6—C7177.7 (2)
C1—C2—C3—C4−0.3 (4)C8—N1—C7—C6178.9 (2)
C1—C2—C3—C10179.6 (3)C1—C6—C7—N13.5 (4)
C2—C3—C4—C5−0.1 (4)C5—C6—C7—N1−174.2 (3)
C10—C3—C4—C5180.0 (3)C7—N1—C8—C9123.5 (3)
C3—C4—C5—C60.3 (4)N1—C8—C9—C8i−71.64 (19)
C2—C1—C6—C5−0.4 (4)C4—C3—C10—N2−179 (100)
C2—C1—C6—C7−178.0 (3)C2—C3—C10—N21(14)
C4—C5—C6—C1−0.1 (4)
D—H···AD—HH···AD···AD—H···A
C8—H8B···Cg1ii0.972.853.58133
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C8—H8BCg1i0.972.853.58133

Symmetry code: (i) . Cg1 is the centroid of the C1–C6 benzene ring.

  3 in total

1.  Three-dimensional supramolecular structures in (E,E)-N,N'-bis(4-nitrobenzylidene)butane-1,4-diamine and (E,E)-N,N'-bis(4-nitrobenzylidene)hexane-1,6-diamine.

Authors:  Christopher Glidewell; John N Low; Janet M S Skakle; James L Wardell
Journal:  Acta Crystallogr C       Date:  2005-12-10       Impact factor: 1.172

2.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

3.  pi-Stacked hydrogen-bonded sheets in N,N'-bis(4-nitrobenzylidene)ethane-1,2-diamine and pi-stacked hydrogen-bonded chains in N,N'-bis(4-nitrobenzylidene)propane-1,3-diamine.

Authors:  Joao A S Bomfim; James L Wardell; John N Low; Janet M S Skakle; Christopher Glidewell
Journal:  Acta Crystallogr C       Date:  2004-12-18       Impact factor: 1.172

  3 in total
  17 in total

1.  4,4'-[Butane-1,4-diylbis(nitrilo-methyl-idyne)]dibenzonitrile.

Authors:  Hoong-Kun Fun; Reza Kia; Hadi Kargar
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-08-30

2.  N,N'-Bis(3-chloro-2-fluoro-benzyl-idene)ethane-1,2-diamine.

Authors:  Hoong-Kun Fun; Reza Kia
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-09-13

3.  N,N'-Bis(2-iodo-benzyl-idene)ethane-1,2-diamine.

Authors:  Hoong-Kun Fun; Reza Kia
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-09-06

4.  N,N'-Bis(3,5-dichloro-benzyl-idene)-ethane-1,2-diamine.

Authors:  Hoong-Kun Fun; Reza Kia
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-10-18

5.  4,4'-[Propane-1,2-diyl-bis(nitrilo-methyl-idyne)]-dibenzo-nitrile-4,4'-[ethane-1,2-diylbis(nitrilo-methyl-idyne)]dibenzonitrile [0.796 (2)/0.204 (2)].

Authors:  Hoong-Kun Fun; Reza Kia; Hadi Kargar
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-10-18

6.  4,4'-[Ethylenebis(nitrilomethylidyne)]dibenzonitrile.

Authors:  Reza Kia; Hoong-Kun Fun; Hadi Kargar
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-03-06

7.  A second monoclinic polymorph of 4,4'-[butane-1,4-diylbis(nitrilo-methyl-idyne)]dibenzonitrile.

Authors:  Reza Kia; Hoong-Kun Fun; Hadi Kargar
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-11-20

8.  N,N'-Bis[2-chloro-5-(trifluoro-meth-yl)benzyl-idene]ethane-1,2-diamine.

Authors:  Hoong-Kun Fun; Reza Kia
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-08-09

9.  N,N'-Bis(4-bromo-benzyl-idene)ethane-1,2-diamine.

Authors:  Hoong-Kun Fun; Valiollah Mirkhani; Reza Kia; Akbar Rostami Vartooni
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-07-05

10.  (Z)-6-{2-[(E)-2,4-Dihydroxy-benzyl-ideneamino]phenyl-amino-methyl-ene}-3-hydroxy-cyclo-hexa-2,4-dienone toluene solvate.

Authors:  Hoong-Kun Fun; Reza Kia; Valiollah Mirkhani; Hasan Zargoshi
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-08-20
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