Literature DB >> 21580986

4,4'-[Propane-1,2-diyl-bis(nitrilo-methyl-idyne)]-dibenzo-nitrile-4,4'-[ethane-1,2-diylbis(nitrilo-methyl-idyne)]dibenzonitrile [0.796 (2)/0.204 (2)].

Hoong-Kun Fun, Reza Kia, Hadi Kargar.   

Abstract

The title cocrystal, 0.796C(19)H(16)N(4)·0.204C(18)H(14)N(4), is a disordered mixture of two potentially bidentate Schiff base ligands. The difference in the two components of the cocrystal is the replacement of the methyl group in the linkage between the imine N atoms in the major component of the Schiff base ligand by an H atom. The imino (C=N) functional groups are coplanar with the benzene rings (only the major component) and extend in opposite directions (both components). Inter-molecular π-π inter-actions with a centroid-to-centroid distance of 3.7371 (8) Å are observed in the crystal packing.

Entities:  

Year:  2008        PMID: 21580986      PMCID: PMC2959562          DOI: 10.1107/S1600536808031097

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For values of bond lengths, see: Allen et al. (1987 ▶). For related structures, see, for example: Li et al. (2005 ▶); Bomfim et al. (2005 ▶); Glidewell et al. (2005 ▶, 2006 ▶); Sun et al. (2004 ▶); Fun, Kia & Kargar (2008 ▶); Fun, Kargar & Kia (2008 ▶).

Experimental

Crystal data

0.796C19H16N4·0.204C18H14N4 M = 297.68 Triclinic, a = 9.2370 (2) Å b = 9.7769 (2) Å c = 9.8169 (2) Å α = 81.846 (1)° β = 75.098 (1)° γ = 67.421 (1)° V = 790.15 (3) Å3 Z = 2 Mo Kα radiation μ = 0.08 mm−1 T = 100.0 (1) K 0.39 × 0.38 × 0.27 mm

Data collection

Bruker SMART APEXII CCD area-detector diffractometer Absorption correction: multi-scan (; Bruker, 2005 ▶) T min = 0.890, T max = 0.979 17295 measured reflections 4628 independent reflections 3746 reflections with I > 2σ(I) R int = 0.020

Refinement

R[F 2 > 2σ(F 2)] = 0.059 wR(F 2) = 0.182 S = 1.04 4628 reflections 230 parameters H-atom parameters constrained Δρmax = 0.57 e Å−3 Δρmin = −0.48 e Å−3 Data collection: APEX2 (Bruker, 2005 ▶); cell refinement: SAINT (Bruker, 2005 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL and PLATON (Spek, 2003 ▶). Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536808031097/ez2140sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536808031097/ez2140Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
0.796C19H16N4·0.204C18H14N4Z = 2
Mr = 297.68F(000) = 313
Triclinic, P1Dx = 1.251 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 9.2370 (2) ÅCell parameters from 6569 reflections
b = 9.7769 (2) Åθ = 3.2–30.8°
c = 9.8169 (2) ŵ = 0.08 mm1
α = 81.846 (1)°T = 100 K
β = 75.098 (1)°Block, colourless
γ = 67.421 (1)°0.39 × 0.38 × 0.27 mm
V = 790.15 (3) Å3
Bruker SMART APEXII CCD area-detector diffractometer4628 independent reflections
Radiation source: fine-focus sealed tube3746 reflections with I > 2σ(I)
graphiteRint = 0.020
φ and ω scansθmax = 30.1°, θmin = 2.2°
Absorption correction: multi-scan (SADABS; Bruker, 2005)h = −13→13
Tmin = 0.890, Tmax = 0.979k = −13→13
17295 measured reflectionsl = −13→13
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.059Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.182H-atom parameters constrained
S = 1.05w = 1/[σ2(Fo2) + (0.0996P)2 + 0.2311P] where P = (Fo2 + 2Fc2)/3
4628 reflections(Δ/σ)max < 0.001
230 parametersΔρmax = 0.57 e Å3
0 restraintsΔρmin = −0.48 e Å3
Experimental. The low-temperature data was collected with the Oxford Cyrosystem Cobra low-temperature attachment.
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/UeqOcc. (<1)
N1A0.44472 (19)0.58449 (16)0.76563 (18)0.0277 (3)0.796 (2)
N2A0.31537 (17)0.28586 (16)0.96983 (15)0.0294 (3)0.796 (2)
C8A0.41965 (19)0.44248 (17)0.78683 (17)0.0276 (3)0.796 (2)
H8AA0.52350.36020.76750.033*0.796 (2)
C9A0.3328 (2)0.42957 (19)0.93985 (17)0.0311 (4)0.796 (2)
H9AA0.39330.44091.00210.037*0.796 (2)
H9AB0.22750.50790.95690.037*0.796 (2)
C19A0.3162 (2)0.44326 (18)0.68371 (15)0.0302 (4)0.796 (2)
H19A0.37700.44260.58830.045*0.796 (2)
H19B0.22040.53080.69540.045*0.796 (2)
H19C0.28730.35690.70390.045*0.796 (2)
N1B0.4751 (7)0.5817 (7)0.8069 (6)0.0236 (13)*0.204 (2)
N2B0.2894 (7)0.2948 (6)0.8959 (6)0.0294 (3)0.204 (2)
C8B0.4619 (7)0.4375 (6)0.8536 (6)0.0225 (11)*0.204 (2)
H8BA0.47260.41440.95080.027*0.204 (2)
H8BB0.54780.36120.79590.027*0.204 (2)
C9B0.2974 (6)0.4397 (6)0.8414 (6)0.0203 (10)0.204 (2)
H9BA0.21060.51790.89620.024*0.204 (2)
H9BB0.28810.45710.74370.024*0.204 (2)
N30.77232 (14)1.20704 (14)0.53274 (13)0.0356 (3)
N40.04293 (17)−0.36229 (15)1.22228 (16)0.0481 (4)
C10.77783 (15)0.70764 (15)0.59144 (14)0.0310 (3)
H1A0.85520.61560.56520.037*
C20.81727 (15)0.83368 (15)0.55783 (13)0.0301 (3)
H2A0.92070.82630.51010.036*
C30.70001 (14)0.97147 (14)0.59648 (12)0.0250 (2)
C40.54475 (14)0.98285 (14)0.66949 (13)0.0281 (3)
H4A0.46711.07490.69570.034*
C50.50763 (14)0.85626 (14)0.70243 (13)0.0274 (3)
H5A0.40430.86350.75070.033*
C60.62345 (14)0.71778 (14)0.66410 (12)0.0248 (2)
C70.58542 (16)0.58172 (14)0.69901 (14)0.0302 (3)
H7A0.66820.48820.67130.036*0.796 (2)
H7B0.64270.49710.64190.036*0.204 (2)
C100.18277 (17)0.28390 (16)1.04041 (17)0.0379 (3)
H10A0.09790.37541.07110.045*0.796 (2)
H10B0.13890.36311.10420.045*0.204 (2)
C110.15451 (14)0.14439 (14)1.07915 (13)0.0269 (3)
C120.00891 (15)0.14545 (14)1.16669 (14)0.0309 (3)
H12A−0.06910.23451.20050.037*
C13−0.02034 (15)0.01501 (14)1.20368 (13)0.0285 (3)
H13A−0.11740.01611.26250.034*
C140.09638 (15)−0.11766 (14)1.15229 (13)0.0269 (3)
C150.24291 (15)−0.12015 (15)1.06462 (14)0.0316 (3)
H15A0.3205−0.20921.03030.038*
C160.27163 (14)0.01010 (14)1.02930 (13)0.0283 (3)
H16A0.36950.00860.97200.034*
C170.73983 (15)1.10277 (15)0.56153 (13)0.0281 (3)
C180.06622 (17)−0.25355 (16)1.19090 (15)0.0348 (3)
U11U22U33U12U13U23
N1A0.0290 (7)0.0270 (7)0.0282 (7)−0.0139 (5)−0.0013 (6)−0.0031 (5)
N2A0.0304 (6)0.0287 (6)0.0298 (7)−0.0149 (5)−0.0010 (5)−0.0024 (5)
C8A0.0276 (7)0.0234 (7)0.0311 (8)−0.0119 (6)−0.0002 (6)−0.0034 (6)
C9A0.0340 (8)0.0303 (8)0.0313 (8)−0.0176 (6)0.0008 (6)−0.0062 (6)
C19A0.0537 (10)0.0276 (7)0.0222 (7)−0.0273 (7)−0.0126 (6)0.0023 (5)
N2B0.0304 (6)0.0287 (6)0.0298 (7)−0.0149 (5)−0.0010 (5)−0.0024 (5)
C9B0.024 (2)0.016 (2)0.021 (2)−0.0076 (19)−0.0053 (18)0.0005 (18)
N30.0337 (6)0.0363 (6)0.0387 (6)−0.0187 (5)0.0002 (5)−0.0055 (5)
N40.0457 (7)0.0340 (7)0.0585 (8)−0.0165 (6)0.0000 (6)0.0008 (6)
C10.0258 (6)0.0283 (6)0.0341 (6)−0.0090 (5)0.0027 (5)−0.0060 (5)
C20.0239 (5)0.0335 (7)0.0312 (6)−0.0127 (5)0.0020 (4)−0.0046 (5)
C30.0253 (5)0.0294 (6)0.0229 (5)−0.0134 (5)−0.0033 (4)−0.0031 (4)
C40.0235 (5)0.0265 (6)0.0325 (6)−0.0096 (4)−0.0006 (4)−0.0051 (5)
C50.0225 (5)0.0294 (6)0.0298 (6)−0.0116 (5)−0.0006 (4)−0.0036 (5)
C60.0252 (5)0.0268 (6)0.0219 (5)−0.0112 (4)−0.0011 (4)−0.0029 (4)
C70.0304 (6)0.0258 (6)0.0308 (6)−0.0108 (5)0.0010 (5)−0.0025 (5)
C100.0293 (6)0.0273 (6)0.0558 (9)−0.0129 (5)0.0018 (6)−0.0112 (6)
C110.0248 (5)0.0261 (6)0.0312 (6)−0.0105 (4)−0.0043 (4)−0.0055 (4)
C120.0260 (6)0.0257 (6)0.0360 (6)−0.0066 (5)0.0000 (5)−0.0066 (5)
C130.0236 (5)0.0305 (6)0.0283 (6)−0.0094 (5)−0.0015 (4)−0.0008 (5)
C140.0269 (6)0.0263 (6)0.0263 (5)−0.0094 (5)−0.0046 (4)−0.0005 (4)
C150.0271 (6)0.0265 (6)0.0358 (6)−0.0072 (5)0.0004 (5)−0.0057 (5)
C160.0232 (5)0.0299 (6)0.0303 (6)−0.0100 (5)−0.0006 (4)−0.0054 (5)
C170.0256 (5)0.0330 (6)0.0269 (6)−0.0134 (5)−0.0013 (4)−0.0054 (5)
C180.0326 (6)0.0304 (7)0.0372 (7)−0.0113 (5)−0.0012 (5)−0.0005 (5)
N1A—C71.2878 (18)C2—C31.3947 (18)
N1A—C8A1.4714 (19)C2—H2A0.9300
N2A—C101.2484 (18)C3—C41.3979 (16)
N2A—C9A1.455 (2)C3—C171.4400 (16)
C8A—C9A1.523 (2)C4—C51.3818 (16)
C8A—C19A1.558 (2)C4—H4A0.9300
C8A—H8AA0.9800C5—C61.3944 (17)
C9A—H9AA0.9700C5—H5A0.9300
C9A—H9AB0.9700C6—C71.4758 (16)
C19A—H19A0.9600C7—H7A0.9600
C19A—H19B0.9600C7—H7B0.9600
C19A—H19C0.9600C10—C111.4658 (17)
N1B—C71.267 (6)C10—H10A0.9600
N1B—C8B1.460 (8)C10—H10B0.9600
N2B—C9B1.464 (7)C11—C121.3945 (17)
N2B—C101.521 (6)C11—C161.3975 (17)
C8B—C9B1.546 (8)C12—C131.3834 (17)
C8B—H8BA0.9700C12—H12A0.9300
C8B—H8BB0.9700C13—C141.3897 (17)
C9B—H9BA0.9700C13—H13A0.9300
C9B—H9BB0.9700C14—C151.3982 (17)
N3—C171.1484 (17)C14—C181.4400 (18)
N4—C181.1489 (19)C15—C161.3781 (17)
C1—C21.3883 (17)C15—H15A0.9300
C1—C61.3930 (16)C16—H16A0.9300
C1—H1A0.9300
C7—N1A—C8A116.77 (13)C1—C6—C5119.43 (11)
C10—N2A—C9A117.17 (13)C1—C6—C7119.38 (11)
N1A—C8A—C9A107.68 (13)C5—C6—C7121.19 (10)
N1A—C8A—C19A108.24 (13)N1B—C7—N1A24.5 (2)
C9A—C8A—C19A111.02 (13)N1B—C7—C6117.3 (3)
N1A—C8A—H8AA110.0N1A—C7—C6122.07 (12)
C9A—C8A—H8AA110.0N1B—C7—H7A117.8
C19A—C8A—H8AA110.0N1A—C7—H7A119.0
N2A—C9A—C8A110.09 (13)C6—C7—H7A119.0
N2A—C9A—H9AA109.6N1B—C7—H7B121.9
C8A—C9A—H9AA109.6N1A—C7—H7B111.9
N2A—C9A—H9AB109.6C6—C7—H7B120.8
C8A—C9A—H9AB109.6H7A—C7—H7B23.9
H9AA—C9A—H9AB108.2N2A—C10—C11121.33 (13)
C7—N1B—C8B115.5 (5)N2A—C10—N2B31.9 (2)
C9B—N2B—C10118.6 (4)C11—C10—N2B116.6 (2)
N1B—C8B—C9B110.0 (5)N2A—C10—H10A119.5
N1B—C8B—H8BA109.7C11—C10—H10A119.2
C9B—C8B—H8BA109.7N2B—C10—H10A114.8
N1B—C8B—H8BB109.7N2A—C10—H10B107.4
C9B—C8B—H8BB109.7C11—C10—H10B121.7
H8BA—C8B—H8BB108.2N2B—C10—H10B121.8
N2B—C9B—C8B107.0 (4)H10A—C10—H10B32.0
N2B—C9B—H9BA110.3C12—C11—C16119.49 (11)
C8B—C9B—H9BA110.3C12—C11—C10119.68 (11)
N2B—C9B—H9BB110.3C16—C11—C10120.83 (11)
C8B—C9B—H9BB110.3C13—C12—C11120.51 (11)
H9BA—C9B—H9BB108.6C13—C12—H12A119.7
C2—C1—C6120.64 (11)C11—C12—H12A119.7
C2—C1—H1A119.7C12—C13—C14119.49 (11)
C6—C1—H1A119.7C12—C13—H13A120.3
C1—C2—C3119.28 (11)C14—C13—H13A120.3
C1—C2—H2A120.4C13—C14—C15120.52 (12)
C3—C2—H2A120.4C13—C14—C18119.56 (11)
C2—C3—C4120.53 (11)C15—C14—C18119.92 (11)
C2—C3—C17119.61 (10)C16—C15—C14119.61 (11)
C4—C3—C17119.86 (11)C16—C15—H15A120.2
C5—C4—C3119.44 (11)C14—C15—H15A120.2
C5—C4—H4A120.3C15—C16—C11120.37 (11)
C3—C4—H4A120.3C15—C16—H16A119.8
C4—C5—C6120.68 (11)C11—C16—H16A119.8
C4—C5—H5A119.7N3—C17—C3179.50 (14)
C6—C5—H5A119.7N4—C18—C14179.53 (16)
C7—N1A—C8A—C9A134.28 (16)C1—C6—C7—N1B152.5 (3)
C7—N1A—C8A—C19A−105.62 (18)C5—C6—C7—N1B−27.5 (4)
C10—N2A—C9A—C8A−136.91 (16)C1—C6—C7—N1A−179.80 (14)
N1A—C8A—C9A—N2A−175.76 (13)C5—C6—C7—N1A0.2 (2)
C19A—C8A—C9A—N2A65.92 (17)C9A—N2A—C10—C11−178.46 (13)
C7—N1B—C8B—C9B−116.7 (5)C9A—N2A—C10—N2B90.8 (4)
C10—N2B—C9B—C8B105.6 (5)C9B—N2B—C10—N2A−83.9 (6)
N1B—C8B—C9B—N2B−177.4 (5)C9B—N2B—C10—C11168.8 (4)
C6—C1—C2—C3−0.6 (2)N2A—C10—C11—C12175.33 (15)
C1—C2—C3—C40.61 (19)N2B—C10—C11—C12−148.5 (3)
C1—C2—C3—C17−179.77 (11)N2A—C10—C11—C16−4.8 (2)
C2—C3—C4—C5−0.45 (19)N2B—C10—C11—C1631.4 (3)
C17—C3—C4—C5179.94 (11)C16—C11—C12—C13−0.31 (19)
C3—C4—C5—C60.25 (19)C10—C11—C12—C13179.60 (12)
C2—C1—C6—C50.38 (19)C11—C12—C13—C14−0.35 (19)
C2—C1—C6—C7−179.66 (11)C12—C13—C14—C150.44 (19)
C4—C5—C6—C1−0.22 (19)C12—C13—C14—C18179.89 (12)
C4—C5—C6—C7179.83 (11)C13—C14—C15—C160.1 (2)
C8B—N1B—C7—N1A83.2 (8)C18—C14—C15—C16−179.31 (12)
C8B—N1B—C7—C6−168.7 (4)C14—C15—C16—C11−0.8 (2)
C8A—N1A—C7—N1B−97.6 (8)C12—C11—C16—C150.90 (19)
C8A—N1A—C7—C6176.59 (13)C10—C11—C16—C15−179.01 (12)
  5 in total

1.  Three-dimensional supramolecular structures in (E,E)-N,N'-bis(4-nitrobenzylidene)butane-1,4-diamine and (E,E)-N,N'-bis(4-nitrobenzylidene)hexane-1,6-diamine.

Authors:  Christopher Glidewell; John N Low; Janet M S Skakle; James L Wardell
Journal:  Acta Crystallogr C       Date:  2005-12-10       Impact factor: 1.172

2.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

3.  pi-Stacked hydrogen-bonded sheets in N,N'-bis(4-nitrobenzylidene)ethane-1,2-diamine and pi-stacked hydrogen-bonded chains in N,N'-bis(4-nitrobenzylidene)propane-1,3-diamine.

Authors:  Joao A S Bomfim; James L Wardell; John N Low; Janet M S Skakle; Christopher Glidewell
Journal:  Acta Crystallogr C       Date:  2004-12-18       Impact factor: 1.172

4.  4,4'-[Propane-1,3-diylbis(nitrilo-methyl-idyne)]dibenzonitrile.

Authors:  Hoong-Kun Fun; Reza Kia; Hadi Kargar
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-06-25

5.  4,4'-[2,2-Dimethyl-propane-1,3-diyl-bis(nitrilo-methyl-idyne)]dibenzonitrile.

Authors:  Hoong-Kun Fun; Hadi Kargar; Reza Kia
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-06-19
  5 in total

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