Literature DB >> 21202324

1-Methyl-3-phenyl-sulfonyl-2-piperidone.

Julio Zukerman-Schpector, Paulo R Olivato, Carlos R Cerqueira, Elisângela Vinhato, Edward R T Tiekink.   

Abstract

The piperidone ring in the title compound, C(12)H(15)NO(3)S, has a slightly distorted half-chair conformation with the methyl, carbonyl and phenyl-sulfonyl ring substituents occupying equatorial, equatorial and axial positions, respectively. Mol-ecules are connected into centrosymmetric dimers via C-H⋯O inter-actions and these associate into layers via C-H⋯O-S contacts. Further C-H⋯O inter-actions involving both the carbonyl and sulfonyl O atoms consolidate the crystal packing by providing connections between the layers.

Entities:  

Year:  2008        PMID: 21202324      PMCID: PMC2961210          DOI: 10.1107/S1600536808009288

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related structures, see: Zukerman-Schpector et al. (1999 ▶, 2006 ▶). For related literature, see: Distefano et al. (1991 ▶); Olivato et al. (1992 ▶, 1997 ▶, 2003 ▶, 2004 ▶); Dal Colle et al. (1995 ▶). For ring conformational analysis, see: Cremer & Pople (1975 ▶). For the synthesis, see: Drabowicz et al. (1983 ▶); Zoretic & Soja (1976 ▶).

Experimental

Crystal data

C12H15NO3S M = 253.32 Monoclinic, a = 9.0191 (16) Å b = 10.4920 (18) Å c = 13.446 (3) Å β = 107.861 (3)° V = 1211.1 (4) Å3 Z = 4 Mo Kα radiation μ = 0.26 mm−1 T = 98 (2) K 0.25 × 0.18 × 0.10 mm

Data collection

Rigaku AFC12κ/SATURN724 diffractometer Absorption correction: multi-scan (ABSCOR; Higashi, 1995 ▶) T min = 0.945, T max = 0.974 5193 measured reflections 2729 independent reflections 2549 reflections with I > 2σ(I) R int = 0.025

Refinement

R[F 2 > 2σ(F 2)] = 0.047 wR(F 2) = 0.118 S = 1.12 2729 reflections 154 parameters H-atom parameters constrained Δρmax = 0.39 e Å−3 Δρmin = −0.45 e Å−3 Data collection: CrystalClear (Rigaku, 2005 ▶); cell refinement: CrystalClear; data reduction: CrystalClear; program(s) used to solve structure: SIR92 (Altomare et al., 1999 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEPII (Johnson, 1976 ▶) and DIAMOND (Brandenburg, 2006 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536808009288/ng2443sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536808009288/ng2443Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C12H15NO3SF000 = 536
Mr = 253.32Dx = 1.389 Mg m3
Monoclinic, P21/nMo Kα radiation λ = 0.71070 Å
Hall symbol: -P 2ynCell parameters from 4417 reflections
a = 9.0191 (16) Åθ = 2.4–40.6º
b = 10.4920 (18) ŵ = 0.26 mm1
c = 13.446 (3) ÅT = 98 (2) K
β = 107.861 (3)ºBlock, colourless
V = 1211.1 (4) Å30.25 × 0.18 × 0.10 mm
Z = 4
Rigaku AFC12κ/SATURN724 diffractometer2729 independent reflections
Radiation source: fine-focus sealed tube2549 reflections with I > 2σ(I)
Monochromator: graphiteRint = 0.025
T = 98(2) Kθmax = 27.5º
ω scansθmin = 2.5º
Absorption correction: multi-scan(ABSCOR; Higashi, 1995)h = −10→11
Tmin = 0.945, Tmax = 0.974k = −13→11
5193 measured reflectionsl = −17→7
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.047H-atom parameters constrained
wR(F2) = 0.118  w = 1/[σ2(Fo2) + (0.0539P)2 + 0.7818P] where P = (Fo2 + 2Fc2)/3
S = 1.12(Δ/σ)max < 0.001
2729 reflectionsΔρmax = 0.39 e Å3
154 parametersΔρmin = −0.45 e Å3
Primary atom site location: structure-invariant direct methodsExtinction correction: none
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
S10.76305 (5)0.20597 (4)0.49677 (3)0.01768 (15)
O11.13033 (15)0.14856 (13)0.56636 (9)0.0186 (3)
O20.79732 (18)0.33520 (13)0.53443 (11)0.0265 (3)
O30.60745 (15)0.17739 (15)0.43018 (11)0.0275 (3)
N11.11807 (17)0.30781 (15)0.45077 (11)0.0170 (3)
C11.0585 (2)0.20646 (17)0.48622 (13)0.0147 (3)
C20.8952 (2)0.16205 (17)0.42479 (13)0.0153 (3)
H20.89690.06690.42100.018*
C30.8348 (2)0.21313 (18)0.31267 (14)0.0196 (4)
H3A0.88430.16570.26760.024*
H3B0.72080.19980.28500.024*
C40.8711 (2)0.35463 (19)0.30992 (14)0.0214 (4)
H4A0.83130.38650.23720.026*
H4B0.81880.40270.35300.026*
C51.0457 (2)0.37553 (19)0.35160 (14)0.0208 (4)
H5A1.09420.34600.29890.025*
H5B1.06680.46790.36250.025*
C61.2777 (2)0.3460 (2)0.50751 (14)0.0213 (4)
H6A1.31560.29560.57170.032*
H6B1.27940.43670.52540.032*
H6C1.34480.33140.46350.032*
C70.8027 (2)0.10460 (17)0.60682 (13)0.0166 (3)
C80.9117 (2)0.14160 (19)0.70016 (14)0.0199 (4)
H80.96810.21890.70410.024*
C90.9368 (2)0.0641 (2)0.78751 (14)0.0211 (4)
H91.01140.08790.85160.025*
C100.8528 (2)−0.04843 (19)0.78116 (14)0.0215 (4)
H100.8704−0.10130.84110.026*
C110.7431 (2)−0.08410 (19)0.68753 (15)0.0209 (4)
H110.6856−0.16070.68390.025*
C120.7177 (2)−0.00801 (18)0.59943 (14)0.0185 (4)
H120.6437−0.03220.53520.022*
U11U22U33U12U13U23
S10.0168 (2)0.0151 (3)0.0225 (2)0.00200 (16)0.00796 (18)0.00263 (16)
O10.0179 (6)0.0205 (7)0.0155 (6)0.0007 (5)0.0026 (5)0.0026 (5)
O20.0382 (8)0.0134 (7)0.0353 (8)0.0021 (6)0.0223 (7)0.0004 (6)
O30.0144 (6)0.0339 (8)0.0324 (7)0.0022 (6)0.0044 (6)0.0120 (6)
N10.0153 (7)0.0180 (8)0.0159 (7)−0.0018 (6)0.0023 (6)0.0013 (6)
C10.0153 (8)0.0149 (9)0.0147 (7)−0.0002 (6)0.0056 (6)−0.0023 (6)
C20.0153 (8)0.0141 (8)0.0163 (8)0.0000 (6)0.0046 (6)−0.0010 (6)
C30.0181 (9)0.0224 (10)0.0154 (8)0.0001 (7)0.0008 (7)−0.0005 (7)
C40.0218 (9)0.0215 (9)0.0178 (8)0.0016 (7)0.0015 (7)0.0027 (7)
C50.0242 (9)0.0193 (9)0.0174 (8)−0.0015 (7)0.0043 (7)0.0044 (7)
C60.0187 (9)0.0233 (10)0.0205 (8)−0.0054 (7)0.0039 (7)0.0003 (7)
C70.0180 (8)0.0145 (8)0.0194 (8)0.0015 (7)0.0090 (7)0.0004 (7)
C80.0192 (9)0.0192 (9)0.0232 (9)−0.0026 (7)0.0096 (7)−0.0035 (7)
C90.0197 (9)0.0254 (10)0.0191 (8)−0.0010 (7)0.0072 (7)−0.0037 (7)
C100.0230 (9)0.0243 (10)0.0205 (8)0.0027 (8)0.0113 (7)0.0037 (7)
C110.0204 (9)0.0180 (9)0.0274 (9)−0.0019 (7)0.0120 (7)0.0002 (7)
C120.0173 (8)0.0170 (9)0.0214 (8)−0.0014 (7)0.0061 (7)−0.0018 (7)
S1—O31.4457 (15)C5—H5A0.9900
S1—O21.4472 (15)C5—H5B0.9900
S1—C71.7674 (18)C6—H6A0.9800
S1—C21.8101 (18)C6—H6B0.9800
O1—C11.233 (2)C6—H6C0.9800
N1—C11.343 (2)C7—C81.391 (3)
N1—C61.463 (2)C7—C121.395 (3)
N1—C51.475 (2)C8—C91.389 (3)
C1—C21.524 (2)C8—H80.9500
C2—C31.534 (2)C9—C101.391 (3)
C2—H21.0000C9—H90.9500
C3—C41.523 (3)C10—C111.393 (3)
C3—H3A0.9900C10—H100.9500
C3—H3B0.9900C11—C121.388 (3)
C4—C51.517 (3)C11—H110.9500
C4—H4A0.9900C12—H120.9500
C4—H4B0.9900
O3—S1—O2118.26 (9)N1—C5—C4112.68 (15)
O3—S1—C7107.61 (9)N1—C5—H5A109.1
O2—S1—C7107.71 (9)C4—C5—H5A109.1
O3—S1—C2106.81 (9)N1—C5—H5B109.1
O2—S1—C2108.70 (8)C4—C5—H5B109.1
C7—S1—C2107.28 (8)H5A—C5—H5B107.8
C1—N1—C6117.93 (15)N1—C6—H6A109.5
C1—N1—C5126.04 (15)N1—C6—H6B109.5
C6—N1—C5115.53 (15)H6A—C6—H6B109.5
O1—C1—N1122.70 (16)N1—C6—H6C109.5
O1—C1—C2118.95 (16)H6A—C6—H6C109.5
N1—C1—C2118.35 (15)H6B—C6—H6C109.5
C1—C2—C3114.75 (15)C8—C7—C12121.42 (17)
C1—C2—S1108.53 (11)C8—C7—S1119.54 (14)
C3—C2—S1110.06 (12)C12—C7—S1118.96 (14)
C1—C2—H2107.8C9—C8—C7119.10 (18)
C3—C2—H2107.8C9—C8—H8120.4
S1—C2—H2107.8C7—C8—H8120.4
C4—C3—C2110.50 (15)C8—C9—C10120.03 (17)
C4—C3—H3A109.6C8—C9—H9120.0
C2—C3—H3A109.6C10—C9—H9120.0
C4—C3—H3B109.6C9—C10—C11120.40 (17)
C2—C3—H3B109.6C9—C10—H10119.8
H3A—C3—H3B108.1C11—C10—H10119.8
C5—C4—C3109.79 (16)C12—C11—C10120.17 (18)
C5—C4—H4A109.7C12—C11—H11119.9
C3—C4—H4A109.7C10—C11—H11119.9
C5—C4—H4B109.7C11—C12—C7118.87 (17)
C3—C4—H4B109.7C11—C12—H12120.6
H4A—C4—H4B108.2C7—C12—H12120.6
C6—N1—C1—O13.1 (3)C1—N1—C5—C421.7 (3)
C5—N1—C1—O1174.61 (17)C6—N1—C5—C4−166.58 (16)
C6—N1—C1—C2−177.19 (15)C3—C4—C5—N1−47.8 (2)
C5—N1—C1—C2−5.7 (3)O3—S1—C7—C8−154.80 (15)
O1—C1—C2—C3−163.27 (15)O2—S1—C7—C8−26.27 (17)
N1—C1—C2—C317.0 (2)C2—S1—C7—C890.58 (15)
O1—C1—C2—S173.16 (18)O3—S1—C7—C1221.86 (17)
N1—C1—C2—S1−106.55 (15)O2—S1—C7—C12150.39 (14)
O3—S1—C2—C1172.73 (12)C2—S1—C7—C12−92.76 (15)
O2—S1—C2—C144.09 (14)C12—C7—C8—C90.5 (3)
C7—S1—C2—C1−72.12 (14)S1—C7—C8—C9177.05 (14)
O3—S1—C2—C346.40 (15)C7—C8—C9—C10−0.5 (3)
O2—S1—C2—C3−82.24 (14)C8—C9—C10—C110.0 (3)
C7—S1—C2—C3161.55 (12)C9—C10—C11—C120.5 (3)
C1—C2—C3—C4−44.1 (2)C10—C11—C12—C7−0.5 (3)
S1—C2—C3—C478.63 (17)C8—C7—C12—C110.0 (3)
C2—C3—C4—C559.6 (2)S1—C7—C12—C11−176.58 (14)
D—H···AD—HH···AD···AD—H···A
C2—H2···O1i1.002.293.272 (2)168
C6—H6B···O2ii0.982.553.424 (3)148
C11—H11···O3iii0.952.623.224 (3)122
C4—H4A···O1iv0.992.483.328 (2)144
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C2—H2⋯O1i1.002.293.272 (2)168
C6—H6B⋯O2ii0.982.553.424 (3)148
C11—H11⋯O3iii0.952.623.224 (3)122
C4—H4A⋯O1iv0.992.483.328 (2)144

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .

  1 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

  1 in total
  5 in total

1.  3,3-Bis[(4-chloro-phen-yl)sulfan-yl]-1-methyl-piperidin-2-one.

Authors:  Julio Zukerman-Schpector; Carlos A De Simone; Paulo R Olivato; Carlos R Cerqueira; Jean M M Santos; Edward R T Tiekink
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-06-30

2.  1-Methyl-3,3-bis-[(4-methyl-phen-yl)sulfan-yl]piperidin-2-one.

Authors:  Julio Zukerman-Schpector; Paulo R Olivato; Carlos R Cerqueira; Jean M M Santos; Seik Weng Ng; Edward R T Tiekink
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-09-30

3.  Crystal structure of 2-meth-oxy-2-[(4-meth-oxy-phen-yl)sulfan-yl]-1-phenyl-ethanone.

Authors:  Ignez Caracelli; Paulo R Olivato; Henrique J Traesel; Jéssica Valença; Daniel N S Rodrigues; Edward R T Tiekink
Journal:  Acta Crystallogr E Crystallogr Commun       Date:  2015-08-15

4.  Crystal structure of 2-meth-oxy-2-[(4-methyl-phen-yl)sulfan-yl]-1-phenyl-ethan-1-one.

Authors:  Julio Zukerman-Schpector; Paulo R Olivato; Henrique J Traesel; Jéssica Valença; Daniel N S Rodrigues; Edward R T Tiekink
Journal:  Acta Crystallogr E Crystallogr Commun       Date:  2015-01-01

5.  2-[(4-Chloro-phen-yl)sulfan-yl]-2-meth-oxy-1-phenyl-ethan-1-one: crystal structure and Hirshfeld surface analysis.

Authors:  Ignez Caracelli; Julio Zukerman-Schpector; Henrique J Traesel; Paulo R Olivato; Mukesh M Jotani; Edward R T Tiekink
Journal:  Acta Crystallogr E Crystallogr Commun       Date:  2018-04-27
  5 in total

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