Literature DB >> 25705490

Crystal structure of 2-meth-oxy-2-[(4-methyl-phen-yl)sulfan-yl]-1-phenyl-ethan-1-one.

Julio Zukerman-Schpector1, Paulo R Olivato2, Henrique J Traesel2, Jéssica Valença2, Daniel N S Rodrigues2, Edward R T Tiekink3.   

Abstract

In the title β-thio-carbonyl compound, C16H16O2S, the carbonyl and meth-oxy O atoms are approximately coplanar [O-C-C-O torsion angle = -18.2 (5)°] and syn to each other, and the tolyl ring is orientated to lie over them. The dihedral angle between the planes of the two rings is 44.03 (16)°. In the crystal, supra-molecular chains are formed along the c axis mediated by C-H⋯O inter-actions involving methine and methyl H atoms as donors, with the carbonyl O atom accepting both bonds; these pack with no specific inter-molecular inter-actions between them.

Entities:  

Keywords:  C—H⋯O inter­actions; crystal structure; β-thio­carbon­yl

Year:  2015        PMID: 25705490      PMCID: PMC4331849          DOI: 10.1107/S205698901402550X

Source DB:  PubMed          Journal:  Acta Crystallogr E Crystallogr Commun


Related literature

For general background to β-thio­carbonyl and β-bis­(thio­carbon­yl) compounds, see: Vinhato et al. (2013 ▸); Zukerman-Schpector et al. (2008 ▸). For related structures, see: Olivato et al. (2013 ▸); Distefano et al. (1996 ▸). For further synthetic details, see: Ali & McDermott (2002 ▸); Zoretic & Soja (1976 ▸).

Experimental

Crystal data

C16H16O2S M = 272.35 Orthorhombic, a = 17.8579 (9) Å b = 8.1257 (4) Å c = 9.8317 (5) Å V = 1426.66 (12) Å3 Z = 4 Mo Kα radiation μ = 0.22 mm−1 T = 293 K 0.41 × 0.14 × 0.08 mm

Data collection

Bruker APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▸) T min = 0.690, T max = 0.745 5399 measured reflections 2337 independent reflections 1648 reflections with I > 2σ(I) R int = 0.031

Refinement

R[F 2 > 2σ(F 2)] = 0.042 wR(F 2) = 0.090 S = 1.02 2337 reflections 174 parameters 1 restraint H-atom parameters constrained Δρmax = 0.14 e Å−3 Δρmin = −0.15 e Å−3 Absolute structure: Flack x determined using 552 quotients [(I +)−(I −)]/[(I +)+(I −)] (Parsons et al., 2013 ▸) Absolute structure parameter: 0.02 (6)

Data collection: APEX2 (Bruker, 2009 ▸); cell refinement: SAINT (Bruker, 2009 ▸); data reduction: SAINT; program(s) used to solve structure: SIR (Burla et al., 2014 ▸; program(s) used to refine structure: SHELXL2014 (Sheldrick, 2008 ▸); molecular graphics: ORTEP-3 for Windows (Farrugia, 2012 ▸) and DIAMOND (Brandenburg, 2006 ▸); software used to prepare material for publication: MarvinSketch (ChemAxon, 2010 ▸) and publCIF (Westrip, 2010 ▸). Crystal structure: contains datablock(s) I, New_Global_Publ_Block. DOI: 10.1107/S205698901402550X/hg5421sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S205698901402550X/hg5421Isup2.hkl Click here for additional data file. Supporting information file. DOI: 10.1107/S205698901402550X/hg5421Isup3.cml Click here for additional data file. . DOI: 10.1107/S205698901402550X/hg5421fig1.tif The mol­ecular structure of the title compound showing the atom-labelling scheme and displacement ellipsoids at the 35% probability level. Click here for additional data file. c . DOI: 10.1107/S205698901402550X/hg5421fig2.tif A view of the supra­molecular chain along the c axis mediated by C—H⋯O inter­actions (bluee dashed lines). Click here for additional data file. c . DOI: 10.1107/S205698901402550X/hg5421fig3.tif A view in projection down the c axis of the unit-cell contents. The C—H⋯O inter­actions are shown as blue dashed lines. CCDC reference: 1035425 Additional supporting information: crystallographic information; 3D view; checkCIF report
C16H16O2SDx = 1.268 Mg m3
Mr = 272.35Mo Kα radiation, λ = 0.71073 Å
Orthorhombic, Pca21Cell parameters from 1023 reflections
a = 17.8579 (9) Åθ = 3.1–18.7°
b = 8.1257 (4) ŵ = 0.22 mm1
c = 9.8317 (5) ÅT = 293 K
V = 1426.66 (12) Å3Irregular, colourless
Z = 40.41 × 0.14 × 0.08 mm
F(000) = 576
Bruker APEXII CCD diffractometer1648 reflections with I > 2σ(I)
φ and ω scansRint = 0.031
Absorption correction: multi-scan (SADABS; Sheldrick, 1996)θmax = 25.4°, θmin = 2.8°
Tmin = 0.690, Tmax = 0.745h = −21→21
5399 measured reflectionsk = −9→9
2337 independent reflectionsl = −10→11
Refinement on F2Hydrogen site location: inferred from neighbouring sites
Least-squares matrix: fullH-atom parameters constrained
R[F2 > 2σ(F2)] = 0.042w = 1/[σ2(Fo2) + (0.0294P)2 + 0.2164P] where P = (Fo2 + 2Fc2)/3
wR(F2) = 0.090(Δ/σ)max < 0.001
S = 1.02Δρmax = 0.14 e Å3
2337 reflectionsΔρmin = −0.15 e Å3
174 parametersAbsolute structure: Flack x determined using 552 quotients [(I+)-(I-)]/[(I+)+(I-)] (Parsons et al., 2013)
1 restraintAbsolute structure parameter: 0.02 (6)
Primary atom site location: structure-invariant direct methods
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
xyzUiso*/Ueq
C10.3662 (3)0.6856 (7)1.3764 (5)0.0916 (18)
H1A0.32490.75321.40460.137*
H1B0.41060.71851.42430.137*
H1C0.35530.57251.39640.137*
C20.3784 (3)0.7055 (6)1.2258 (5)0.0642 (13)
C30.3285 (3)0.7876 (6)1.1440 (6)0.0737 (14)
H30.28500.83001.18230.088*
C40.3411 (3)0.8094 (6)1.0061 (5)0.0683 (13)
H40.30660.86700.95370.082*
C50.4049 (2)0.7455 (5)0.9462 (5)0.0564 (11)
C60.4553 (2)0.6622 (5)1.0273 (5)0.0615 (12)
H60.49870.61860.98930.074*
C70.4416 (3)0.6434 (5)1.1643 (5)0.0635 (13)
H70.47630.58681.21710.076*
C80.4839 (2)0.9437 (5)0.7603 (5)0.0576 (10)
H80.49300.97080.66460.069*
C90.6015 (3)0.8116 (6)0.7474 (6)0.0834 (15)
H9A0.61390.86370.66270.125*
H9B0.57710.70850.72990.125*
H9C0.64650.79270.79870.125*
C100.4468 (2)1.0888 (5)0.8275 (5)0.0559 (11)
C110.3852 (2)1.1782 (5)0.7587 (5)0.0539 (10)
C120.3573 (2)1.3181 (5)0.8205 (5)0.0674 (13)
H120.37671.35190.90370.081*
C130.3007 (3)1.4083 (5)0.7595 (7)0.0793 (14)
H130.28281.50270.80210.095*
C140.2709 (3)1.3608 (6)0.6381 (7)0.0781 (14)
H140.23251.42120.59830.094*
C150.2984 (3)1.2225 (7)0.5754 (5)0.0840 (16)
H150.27801.18870.49300.101*
C160.3556 (3)1.1333 (6)0.6325 (5)0.0736 (13)
H160.37481.04230.58680.088*
O10.55239 (15)0.9162 (4)0.8235 (3)0.0666 (9)
O20.46803 (18)1.1328 (4)0.9400 (3)0.0727 (9)
S0.41986 (7)0.76542 (13)0.76791 (16)0.0711 (4)
U11U22U33U12U13U23
C10.090 (4)0.115 (5)0.070 (4)−0.030 (3)0.006 (3)0.005 (3)
C20.065 (3)0.064 (3)0.064 (4)−0.020 (2)0.006 (3)0.000 (3)
C30.061 (3)0.077 (3)0.084 (4)−0.004 (3)0.011 (3)0.002 (3)
C40.064 (3)0.064 (3)0.077 (4)−0.001 (2)−0.007 (3)0.006 (3)
C50.061 (3)0.048 (2)0.060 (3)−0.011 (2)−0.001 (2)−0.003 (2)
C60.061 (3)0.056 (3)0.067 (3)0.000 (2)−0.001 (2)−0.001 (3)
C70.066 (3)0.058 (3)0.066 (4)−0.006 (2)−0.008 (3)0.009 (3)
C80.070 (3)0.058 (2)0.045 (2)−0.0025 (19)−0.003 (3)0.003 (3)
C90.084 (3)0.095 (3)0.072 (4)0.024 (3)−0.003 (3)0.000 (4)
C100.070 (3)0.052 (3)0.046 (3)−0.009 (2)0.007 (2)0.002 (2)
C110.061 (2)0.051 (2)0.049 (3)−0.0077 (18)0.012 (3)0.003 (3)
C120.066 (3)0.065 (3)0.071 (3)−0.009 (2)0.012 (3)−0.013 (3)
C130.069 (3)0.065 (3)0.104 (4)0.006 (2)0.013 (4)−0.008 (4)
C140.064 (3)0.077 (3)0.094 (4)0.009 (3)0.013 (3)0.013 (3)
C150.085 (3)0.102 (4)0.065 (4)0.014 (3)−0.011 (3)0.010 (3)
C160.090 (3)0.078 (3)0.053 (3)0.017 (3)−0.004 (3)−0.007 (3)
O10.0665 (18)0.077 (2)0.057 (2)0.0086 (16)−0.0038 (16)−0.0012 (16)
O20.094 (2)0.076 (2)0.048 (2)−0.0017 (17)−0.0047 (18)−0.0078 (19)
S0.0948 (8)0.0600 (6)0.0583 (7)−0.0129 (6)−0.0079 (8)−0.0055 (8)
C1—C21.505 (7)C8—H80.9800
C1—H1A0.9600C9—O11.432 (5)
C1—H1B0.9600C9—H9A0.9600
C1—H1C0.9600C9—H9B0.9600
C2—C31.373 (7)C9—H9C0.9600
C2—C71.376 (6)C10—O21.224 (5)
C3—C41.385 (7)C10—C111.480 (6)
C3—H30.9300C11—C121.382 (6)
C4—C51.383 (6)C11—C161.398 (7)
C4—H40.9300C12—C131.384 (6)
C5—C61.379 (6)C12—H120.9300
C5—S1.781 (5)C13—C141.363 (8)
C6—C71.378 (6)C13—H130.9300
C6—H60.9300C14—C151.373 (6)
C7—H70.9300C14—H140.9300
C8—O11.390 (4)C15—C161.372 (6)
C8—C101.505 (5)C15—H150.9300
C8—S1.847 (4)C16—H160.9300
C2—C1—H1A109.5O1—C9—H9A109.5
C2—C1—H1B109.5O1—C9—H9B109.5
H1A—C1—H1B109.5H9A—C9—H9B109.5
C2—C1—H1C109.5O1—C9—H9C109.5
H1A—C1—H1C109.5H9A—C9—H9C109.5
H1B—C1—H1C109.5H9B—C9—H9C109.5
C3—C2—C7116.9 (5)O2—C10—C11120.0 (4)
C3—C2—C1122.3 (5)O2—C10—C8119.2 (4)
C7—C2—C1120.8 (5)C11—C10—C8120.7 (4)
C2—C3—C4122.0 (5)C12—C11—C16117.9 (4)
C2—C3—H3119.0C12—C11—C10118.1 (4)
C4—C3—H3119.0C16—C11—C10123.9 (4)
C5—C4—C3120.2 (5)C11—C12—C13120.6 (5)
C5—C4—H4119.9C11—C12—H12119.7
C3—C4—H4119.9C13—C12—H12119.7
C6—C5—C4118.4 (5)C14—C13—C12120.9 (5)
C6—C5—S121.0 (4)C14—C13—H13119.5
C4—C5—S120.6 (4)C12—C13—H13119.5
C7—C6—C5120.2 (5)C13—C14—C15119.0 (5)
C7—C6—H6119.9C13—C14—H14120.5
C5—C6—H6119.9C15—C14—H14120.5
C2—C7—C6122.3 (5)C16—C15—C14121.0 (5)
C2—C7—H7118.8C16—C15—H15119.5
C6—C7—H7118.8C14—C15—H15119.5
O1—C8—C10108.5 (4)C15—C16—C11120.4 (5)
O1—C8—S113.6 (3)C15—C16—H16119.8
C10—C8—S108.9 (3)C11—C16—H16119.8
O1—C8—H8108.6C8—O1—C9113.7 (3)
C10—C8—H8108.6C5—S—C8101.8 (2)
S—C8—H8108.6
C7—C2—C3—C4−0.8 (7)O2—C10—C11—C16−177.7 (4)
C1—C2—C3—C4178.2 (4)C8—C10—C11—C162.3 (6)
C2—C3—C4—C51.0 (7)C16—C11—C12—C131.2 (6)
C3—C4—C5—C6−0.7 (6)C10—C11—C12—C13178.7 (4)
C3—C4—C5—S177.5 (4)C11—C12—C13—C140.5 (7)
C4—C5—C6—C70.3 (6)C12—C13—C14—C15−0.8 (7)
S—C5—C6—C7−177.9 (4)C13—C14—C15—C16−0.6 (8)
C3—C2—C7—C60.3 (7)C14—C15—C16—C112.4 (8)
C1—C2—C7—C6−178.7 (4)C12—C11—C16—C15−2.7 (7)
C5—C6—C7—C20.0 (7)C10—C11—C16—C15180.0 (4)
O1—C8—C10—O2−18.2 (5)C10—C8—O1—C9−164.3 (3)
S—C8—C10—O2105.9 (4)S—C8—O1—C974.4 (4)
O1—C8—C10—C11161.7 (3)C6—C5—S—C8−83.1 (4)
S—C8—C10—C11−74.1 (4)C4—C5—S—C898.8 (4)
O2—C10—C11—C124.9 (6)O1—C8—S—C563.2 (4)
C8—C10—C11—C12−175.0 (4)C10—C8—S—C5−57.9 (3)
D—H···AD—HH···AD···AD—H···A
C1—H1B···O2i0.962.493.366 (6)152
C8—H8···O2ii0.982.463.323 (6)146
Table 1

Hydrogen-bond geometry (, )

DHA DHHA D A DHA
C1H1BO2i 0.962.493.366(6)152
C8H8O2ii 0.982.463.323(6)146

Symmetry codes: (i) ; (ii) .

  4 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Conformational analysis of some N,N-diethyl-2-[(4'-substituted) phenylthio] acetamides.

Authors:  Elisângela Vinhato; Paulo R Olivato; Julio Zukerman-Schpector; Maurizio Dal Colle
Journal:  Spectrochim Acta A Mol Biomol Spectrosc       Date:  2013-07-08       Impact factor: 4.098

3.  1-Methyl-3-phenyl-sulfonyl-2-piperidone.

Authors:  Julio Zukerman-Schpector; Paulo R Olivato; Carlos R Cerqueira; Elisângela Vinhato; Edward R T Tiekink
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-04-16

4.  Use of intensity quotients and differences in absolute structure refinement.

Authors:  Simon Parsons; Howard D Flack; Trixie Wagner
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