| Literature DB >> 29850096 |
Ignez Caracelli1, Julio Zukerman-Schpector2, Henrique J Traesel3, Paulo R Olivato3, Mukesh M Jotani4, Edward R T Tiekink5.
Abstract
The title compound, C15H13ClO2S, comprises (4-chloro-phen-yl)sulfanyl, benzaldehyde and meth-oxy residues linked at a chiral methine-C atom (the crystal is racemic). A twist in the methine-C-C(carbon-yl) bond [O-C-C-O torsion angle = 19.3 (7)°] leads to a dihedral angle of 22.2 (5)° between the benzaldehyde and methine+meth-oxy residues. The chloro-benzene ring is folded to lie over the O atoms, with the dihedral angle between the benzene rings being 42.9 (2)°. In the crystal, the carbonyl-O atom accepts two C-H⋯O inter-actions with methyl- and methine-C-H atoms being the donors. The result is an helical supra-molecular chain aligned along the c axis; chains pack with no directional inter-actions between them. An analysis of the Hirshfeld surface points to the important contributions of weak H⋯H and C⋯C contacts to the mol-ecular packing.Entities:
Keywords: Hirshfeld surface analysis; NCI plots; crystal structure; phenylethanone; sulfanyl
Year: 2018 PMID: 29850096 PMCID: PMC5947492 DOI: 10.1107/S2056989018006072
Source DB: PubMed Journal: Acta Crystallogr E Crystallogr Commun
Figure 1The molecular structure of (I), showing the atom-labelling scheme and displacement ellipsoids at the 35% probability level.
Hydrogen-bond geometry (Å, °)
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| C7—H7 | 0.96 | 2.53 | 3.297 (9) | 137 |
| C8—H8⋯O2i | 0.98 | 2.42 | 3.305 (8) | 150 |
Symmetry code: (i) .
Figure 2Molecular packing in (I): (a) view of the supramolecular chain parallel to the c axis and (b) view of the unit-cell contents shown in projection down the b axis; one chain is highlighted in space-filling mode. The C—H⋯O contacts are shown as orange dashed lines.
Figure 3Two views of the Hirshfeld surface for (I) mapped over d norm in the range −0.073 to +1.389 au.
Summary of short interatomic contacts (Å) in (I)
| Contact | Distance | Symmetry operation |
|---|---|---|
| H7 | 2.10 | 1 − |
| H7 | 2.76 | 1 − |
| H7 | 2.73 | 1 − |
| C6⋯C9 | 3.33 | 1 − |
Figure 4Two views of the Hirshfeld surfaces mapped over the electrostatic potential in the range −0.073 to + 0.056 au. The red and blue regions represent negative and positive electrostatic potentials, respectively.
Figure 5A view of the Hirshfeld surface mapped over d norm in the range −0.073 to +1.389 au highlighting intermolecular C—H⋯O, C⋯C, H⋯H and C⋯H/H⋯C contacts by black, red, yellow and sky-blue dashed lines, respectively.
Figure 6The full two-dimensional fingerprint plot for (I) and those delineated into H⋯H, C⋯H/H⋯C, Cl⋯H/H⋯Cl, O⋯H/H⋯O and C⋯C contacts.
Percentage contributions of interatomic contacts to the Hirshfeld surface for (I)
| Contact | Percentage contribution |
|---|---|
| H⋯H | 39.3 |
| C⋯H/H⋯C | 23.2 |
| Cl⋯H/H⋯Cl | 12.8 |
| O⋯H/H⋯O | 11.0 |
| S⋯H/H⋯S | 4.4 |
| Cl⋯S/S⋯Cl | 2.1 |
| Cl⋯O/O⋯Cl | 2.1 |
| C⋯O/O⋯C | 1.5 |
| C⋯Cl/Cl⋯C | 1.5 |
| C⋯S/S⋯C | 1.2 |
| C⋯C | 0.6 |
Figure 7Non-covalent interaction plots for intermolecular interactions between (a) methyl-C7- and methine-C—H atoms, and the carbonyl-O2 atom, (b) chlorobenzene-C6 and methyl-H7C atoms and (c) methyl-H7B and phenyl-H14 atoms.
Figure 8Overlay diagram of (a) (I), red image, (b) (II), green and (c) (III), blue.
Experimental details
| Crystal data | |
| Chemical formula | C15H13ClO2S |
|
| 292.76 |
| Crystal system, space group | Orthorhombic, |
| Temperature (K) | 293 |
|
| 17.964 (3), 8.0234 (15), 9.7761 (19) |
|
| 1409.0 (5) |
|
| 4 |
| Radiation type | Mo |
| μ (mm−1) | 0.41 |
| Crystal size (mm) | 0.42 × 0.21 × 0.12 |
| Data collection | |
| Diffractometer | Bruker APEXII CCD |
| Absorption correction | Multi-scan ( |
|
| 0.365, 0.745 |
| No. of measured, independent and observed [ | 5010, 2081, 1505 |
|
| 0.049 |
| (sin θ/λ)max (Å−1) | 0.594 |
| Refinement | |
|
| 0.048, 0.116, 1.04 |
| No. of reflections | 2081 |
| No. of parameters | 173 |
| No. of restraints | 1 |
| H-atom treatment | H-atom parameters constrained |
| Δρmax, Δρmin (e Å−3) | 0.28, −0.18 |
| Absolute structure | Flack |
| Absolute structure parameter | 0.06 (9) |
Computer programs: APEX2 and SAINT (Bruker, 2009 ▸), SIR2014 (Burla et al., 2015 ▸), SHELXL2014 (Sheldrick, 2015 ▸), ORTEP-3 for Windows (Farrugia, 2012 ▸), DIAMOND (Brandenburg, 2006 ▸), MarvinSketch (ChemAxon, 2010 ▸) and publCIF (Westrip, 2010 ▸).
| C15H13ClO2S | |
| Mo | |
| Orthorhombic, | Cell parameters from 1839 reflections |
| θ = 2.5–23.7° | |
| µ = 0.41 mm−1 | |
| Irregular, colourless | |
| 0.42 × 0.21 × 0.12 mm | |
| Bruker APEXII CCD diffractometer | 1505 reflections with |
| φ and ω scans | |
| Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | θmax = 25.0°, θmin = 2.3° |
| 5010 measured reflections | |
| 2081 independent reflections |
| Refinement on | Hydrogen site location: inferred from neighbouring sites |
| Least-squares matrix: full | H-atom parameters constrained |
| (Δ/σ)max < 0.001 | |
| Δρmax = 0.28 e Å−3 | |
| 2081 reflections | Δρmin = −0.18 e Å−3 |
| 173 parameters | Absolute structure: Flack |
| 1 restraint | Absolute structure parameter: 0.06 (9) |
| Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
| Cl1 | 0.36121 (11) | 0.3177 (3) | 1.0687 (2) | 0.0916 (7) | |
| S1 | 0.41934 (10) | 0.2492 (2) | 0.4390 (2) | 0.0646 (5) | |
| O1 | 0.5511 (2) | 0.0919 (5) | 0.4909 (4) | 0.0616 (11) | |
| O2 | 0.4654 (2) | −0.1253 (5) | 0.6070 (4) | 0.0685 (12) | |
| C1 | 0.3786 (4) | 0.2943 (8) | 0.8946 (7) | 0.0571 (17) | |
| C2 | 0.3254 (4) | 0.2193 (8) | 0.8147 (9) | 0.069 (2) | |
| H2 | 0.2812 | 0.1806 | 0.8527 | 0.083* | |
| C3 | 0.3396 (4) | 0.2028 (8) | 0.6744 (8) | 0.0644 (18) | |
| H3 | 0.3048 | 0.1506 | 0.6186 | 0.077* | |
| C4 | 0.4045 (3) | 0.2632 (7) | 0.6186 (7) | 0.0529 (15) | |
| C5 | 0.4565 (4) | 0.3385 (7) | 0.7019 (7) | 0.0579 (16) | |
| H5 | 0.5005 | 0.3793 | 0.6647 | 0.069* | |
| C6 | 0.4432 (4) | 0.3534 (8) | 0.8404 (7) | 0.0593 (18) | |
| H6 | 0.4784 | 0.4038 | 0.8967 | 0.071* | |
| C7 | 0.6003 (4) | 0.1950 (9) | 0.4167 (9) | 0.081 (2) | |
| H7A | 0.6078 | 0.1492 | 0.3271 | 0.121* | |
| H7B | 0.6472 | 0.2011 | 0.4637 | 0.121* | |
| H7C | 0.5794 | 0.3047 | 0.4090 | 0.121* | |
| C8 | 0.4828 (3) | 0.0677 (6) | 0.4279 (7) | 0.0504 (14) | |
| H8 | 0.4915 | 0.0421 | 0.3312 | 0.060* | |
| C9 | 0.4447 (3) | −0.0804 (7) | 0.4942 (6) | 0.0493 (14) | |
| C10 | 0.3836 (3) | −0.1693 (7) | 0.4225 (7) | 0.0465 (13) | |
| C11 | 0.3538 (3) | −0.3095 (7) | 0.4869 (7) | 0.0577 (16) | |
| H11 | 0.3719 | −0.3431 | 0.5716 | 0.069* | |
| C12 | 0.2974 (3) | −0.3981 (7) | 0.4246 (9) | 0.0690 (18) | |
| H12 | 0.2784 | −0.4924 | 0.4674 | 0.083* | |
| C13 | 0.2691 (4) | −0.3500 (9) | 0.3017 (9) | 0.073 (2) | |
| H13 | 0.2306 | −0.4097 | 0.2613 | 0.087* | |
| C14 | 0.2984 (4) | −0.2114 (9) | 0.2377 (8) | 0.075 (2) | |
| H14 | 0.2794 | −0.1774 | 0.1537 | 0.090* | |
| C15 | 0.3559 (3) | −0.1224 (8) | 0.2978 (7) | 0.0621 (17) | |
| H15 | 0.3758 | −0.0303 | 0.2531 | 0.075* |
| Cl1 | 0.1147 (15) | 0.1100 (15) | 0.0501 (11) | 0.0357 (11) | 0.0107 (12) | −0.0064 (10) |
| S1 | 0.0977 (11) | 0.0519 (8) | 0.0441 (8) | 0.0100 (8) | −0.0060 (11) | 0.0053 (8) |
| O1 | 0.072 (3) | 0.068 (3) | 0.045 (3) | −0.012 (2) | −0.002 (2) | 0.001 (2) |
| O2 | 0.103 (3) | 0.066 (3) | 0.037 (3) | −0.010 (2) | −0.008 (3) | 0.009 (2) |
| C1 | 0.074 (4) | 0.054 (4) | 0.042 (4) | 0.022 (3) | 0.005 (4) | −0.003 (3) |
| C2 | 0.075 (5) | 0.061 (4) | 0.071 (5) | 0.002 (3) | 0.014 (4) | −0.002 (4) |
| C3 | 0.073 (4) | 0.054 (4) | 0.066 (5) | 0.000 (3) | −0.005 (4) | −0.006 (3) |
| C4 | 0.074 (4) | 0.036 (3) | 0.048 (4) | 0.009 (3) | −0.003 (4) | 0.001 (3) |
| C5 | 0.068 (4) | 0.051 (4) | 0.055 (4) | 0.005 (3) | 0.001 (4) | −0.004 (3) |
| C6 | 0.068 (4) | 0.058 (4) | 0.052 (4) | 0.014 (3) | −0.010 (3) | −0.015 (3) |
| C7 | 0.087 (5) | 0.092 (5) | 0.063 (6) | −0.026 (4) | 0.004 (5) | −0.004 (5) |
| C8 | 0.068 (3) | 0.049 (3) | 0.034 (3) | 0.001 (3) | 0.003 (3) | 0.003 (3) |
| C9 | 0.075 (4) | 0.046 (3) | 0.028 (3) | 0.009 (3) | 0.009 (3) | 0.002 (3) |
| C10 | 0.061 (3) | 0.044 (3) | 0.035 (3) | 0.006 (3) | 0.006 (3) | −0.002 (3) |
| C11 | 0.067 (4) | 0.056 (4) | 0.050 (4) | 0.005 (3) | 0.004 (3) | 0.008 (3) |
| C12 | 0.073 (4) | 0.053 (4) | 0.081 (6) | −0.007 (3) | 0.012 (5) | 0.005 (4) |
| C13 | 0.073 (5) | 0.076 (5) | 0.069 (5) | −0.011 (3) | 0.002 (4) | −0.011 (4) |
| C14 | 0.088 (5) | 0.092 (5) | 0.046 (5) | −0.003 (4) | −0.010 (4) | −0.006 (4) |
| C15 | 0.082 (4) | 0.059 (4) | 0.046 (4) | −0.013 (3) | −0.003 (4) | 0.001 (3) |
| Cl1—C1 | 1.741 (7) | C7—H7B | 0.9600 |
| S1—C4 | 1.780 (7) | C7—H7C | 0.9600 |
| S1—C8 | 1.853 (5) | C8—C9 | 1.517 (7) |
| O1—C8 | 1.386 (6) | C8—H8 | 0.9800 |
| O1—C7 | 1.412 (8) | C9—C10 | 1.485 (8) |
| O2—C9 | 1.219 (7) | C10—C15 | 1.370 (9) |
| C1—C6 | 1.362 (9) | C10—C11 | 1.395 (8) |
| C1—C2 | 1.372 (10) | C11—C12 | 1.379 (9) |
| C2—C3 | 1.401 (10) | C11—H11 | 0.9300 |
| C2—H2 | 0.9300 | C12—C13 | 1.360 (11) |
| C3—C4 | 1.376 (9) | C12—H12 | 0.9300 |
| C3—H3 | 0.9300 | C13—C14 | 1.380 (9) |
| C4—C5 | 1.378 (8) | C13—H13 | 0.9300 |
| C5—C6 | 1.381 (9) | C14—C15 | 1.387 (8) |
| C5—H5 | 0.9300 | C14—H14 | 0.9300 |
| C6—H6 | 0.9300 | C15—H15 | 0.9300 |
| C7—H7A | 0.9600 | ||
| C4—S1—C8 | 101.5 (3) | O1—C8—S1 | 114.1 (4) |
| C8—O1—C7 | 114.1 (5) | C9—C8—S1 | 108.2 (4) |
| C6—C1—C2 | 121.6 (7) | O1—C8—H8 | 108.6 |
| C6—C1—Cl1 | 119.7 (6) | C9—C8—H8 | 108.6 |
| C2—C1—Cl1 | 118.6 (6) | S1—C8—H8 | 108.6 |
| C1—C2—C3 | 118.2 (7) | O2—C9—C10 | 120.7 (5) |
| C1—C2—H2 | 120.9 | O2—C9—C8 | 118.8 (5) |
| C3—C2—H2 | 120.9 | C10—C9—C8 | 120.6 (5) |
| C4—C3—C2 | 120.6 (6) | C15—C10—C11 | 118.9 (6) |
| C4—C3—H3 | 119.7 | C15—C10—C9 | 123.8 (5) |
| C2—C3—H3 | 119.7 | C11—C10—C9 | 117.3 (5) |
| C3—C4—C5 | 119.6 (7) | C12—C11—C10 | 119.9 (7) |
| C3—C4—S1 | 119.7 (5) | C12—C11—H11 | 120.0 |
| C5—C4—S1 | 120.6 (5) | C10—C11—H11 | 120.0 |
| C4—C5—C6 | 120.0 (6) | C13—C12—C11 | 121.2 (6) |
| C4—C5—H5 | 120.0 | C13—C12—H12 | 119.4 |
| C6—C5—H5 | 120.0 | C11—C12—H12 | 119.4 |
| C1—C6—C5 | 119.9 (6) | C12—C13—C14 | 119.1 (7) |
| C1—C6—H6 | 120.1 | C12—C13—H13 | 120.5 |
| C5—C6—H6 | 120.1 | C14—C13—H13 | 120.5 |
| O1—C7—H7A | 109.5 | C13—C14—C15 | 120.5 (7) |
| O1—C7—H7B | 109.5 | C13—C14—H14 | 119.8 |
| H7A—C7—H7B | 109.5 | C15—C14—H14 | 119.8 |
| O1—C7—H7C | 109.5 | C10—C15—C14 | 120.4 (6) |
| H7A—C7—H7C | 109.5 | C10—C15—H15 | 119.8 |
| H7B—C7—H7C | 109.5 | C14—C15—H15 | 119.8 |
| O1—C8—C9 | 108.6 (5) | ||
| C6—C1—C2—C3 | 0.8 (9) | O1—C8—C9—O2 | 19.3 (7) |
| Cl1—C1—C2—C3 | 179.3 (5) | S1—C8—C9—O2 | −105.1 (5) |
| C1—C2—C3—C4 | −1.2 (9) | O1—C8—C9—C10 | −160.4 (5) |
| C2—C3—C4—C5 | 0.9 (9) | S1—C8—C9—C10 | 75.2 (6) |
| C2—C3—C4—S1 | −177.2 (5) | O2—C9—C10—C15 | 177.7 (6) |
| C8—S1—C4—C3 | −101.5 (5) | C8—C9—C10—C15 | −2.5 (8) |
| C8—S1—C4—C5 | 80.5 (5) | O2—C9—C10—C11 | −2.9 (8) |
| C3—C4—C5—C6 | −0.2 (8) | C8—C9—C10—C11 | 176.9 (5) |
| S1—C4—C5—C6 | 177.9 (5) | C15—C10—C11—C12 | 0.0 (9) |
| C2—C1—C6—C5 | 0.0 (9) | C9—C10—C11—C12 | −179.4 (5) |
| Cl1—C1—C6—C5 | −178.5 (5) | C10—C11—C12—C13 | −1.0 (9) |
| C4—C5—C6—C1 | −0.3 (9) | C11—C12—C13—C14 | 1.0 (10) |
| C7—O1—C8—C9 | 163.9 (5) | C12—C13—C14—C15 | 0.1 (10) |
| C7—O1—C8—S1 | −75.3 (6) | C11—C10—C15—C14 | 1.0 (10) |
| C4—S1—C8—O1 | −63.7 (4) | C9—C10—C15—C14 | −179.6 (5) |
| C4—S1—C8—C9 | 57.3 (5) | C13—C14—C15—C10 | −1.1 (10) |
| H··· | ||||
| C7—H7 | 0.96 | 2.53 | 3.297 (9) | 137 |
| C8—H8···O2i | 0.98 | 2.42 | 3.305 (8) | 150 |