Literature DB >> 22065241

1-Methyl-3,3-bis-[(4-methyl-phen-yl)sulfan-yl]piperidin-2-one.

Julio Zukerman-Schpector, Paulo R Olivato, Carlos R Cerqueira, Jean M M Santos, Seik Weng Ng, Edward R T Tiekink.   

Abstract

The piperidone ring in the title compound, C(20)H(23)NOS(2), has a half-chair distorted to a twisted-boat conformation [Q(T) = 0.5200 (17) Å]. One of the S-bound benzene rings is almost perpendicular to the least-squares plane through the piperidone ring, whereas the other is not [dihedral angles = 75.28 (5) and 46.41 (5) Å, respectively]. In the crystal, the presence of C-H⋯O and C-H⋯π inter-actions leads to the formation of supra-molecular layers in the ab plane.

Entities:  

Year:  2011        PMID: 22065241      PMCID: PMC3201309          DOI: 10.1107/S1600536811037111

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For background to β-thio­carbonyl compounds, see: Vinhato et al. (2011 ▶); Olivato et al. (2009 ▶). For related structures, see: Zukerman-Schpector et al. (2008 ▶, 2010 ▶). For ring conformational analysis, see: Cremer & Pople (1975 ▶). For the synthesis, see: Hashmat & McDermott (2002 ▶); Zoretic & Soja (1976 ▶).

Experimental

Crystal data

C20H23NOS2 M = 357.53 Monoclinic, a = 7.8943 (1) Å b = 9.8078 (2) Å c = 23.9145 (4) Å β = 92.803 (1)° V = 1849.38 (5) Å3 Z = 4 Cu Kα radiation μ = 2.65 mm−1 T = 100 K 0.25 × 0.20 × 0.15 mm

Data collection

Agilent SuperNova Dual Cu at zero diffractometer with an Atlas detector Absorption correction: multi-scan (CrysAlis PRO; Agilent, 2010 ▶) T min = 0.558, T max = 0.692 14169 measured reflections 3719 independent reflections 3465 reflections with I > 2σ(I) R int = 0.042

Refinement

R[F 2 > 2σ(F 2)] = 0.039 wR(F 2) = 0.107 S = 1.06 3719 reflections 220 parameters H-atom parameters constrained Δρmax = 0.68 e Å−3 Δρmin = −0.31 e Å−3 Data collection: CrysAlis PRO (Agilent, 2010 ▶); cell refinement: CrysAlis PRO; data reduction: CrysAlis PRO; program(s) used to solve structure: SIR92 (Altomare et al., 1999 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 (Farrugia, 1997 ▶) and DIAMOND (Brandenburg, 2006 ▶); software used to prepare material for publication: publCIF (Westrip, 2010 ▶). Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536811037111/hg5094sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811037111/hg5094Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536811037111/hg5094Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C20H23NOS2F(000) = 760
Mr = 357.53Dx = 1.284 Mg m3
Monoclinic, P21/nCu Kα radiation, λ = 1.54184 Å
Hall symbol: -P 2ynCell parameters from 8545 reflections
a = 7.8943 (1) Åθ = 3.7–74.2°
b = 9.8078 (2) ŵ = 2.65 mm1
c = 23.9145 (4) ÅT = 100 K
β = 92.803 (1)°Block, colourless
V = 1849.38 (5) Å30.25 × 0.20 × 0.15 mm
Z = 4
Agilent SuperNova Dual Cu at zero diffractometer with an Atlas detector3719 independent reflections
Radiation source: fine-focus sealed tube3465 reflections with I > 2σ(I)
graphiteRint = 0.042
Detector resolution: 10.4041 pixels mm-1θmax = 74.4°, θmin = 3.7°
ω scansh = −7→9
Absorption correction: multi-scan (CrysAlis PRO; Agilent, 2010)k = −11→12
Tmin = 0.558, Tmax = 0.692l = −29→29
14169 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.039Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.107H-atom parameters constrained
S = 1.06w = 1/[σ2(Fo2) + (0.0608P)2 + 0.7727P] where P = (Fo2 + 2Fc2)/3
3719 reflections(Δ/σ)max < 0.001
220 parametersΔρmax = 0.68 e Å3
0 restraintsΔρmin = −0.31 e Å3
Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
S10.56118 (5)0.85032 (4)0.742407 (16)0.02168 (13)
S20.59643 (5)0.63592 (4)0.658865 (16)0.02231 (13)
N10.15516 (17)0.80815 (15)0.66875 (6)0.0232 (3)
O10.38510 (15)0.88872 (12)0.62753 (5)0.0266 (3)
C10.0471 (2)0.8882 (2)0.62973 (8)0.0307 (4)
H1A0.08710.87830.59180.046*
H1B0.05170.98440.64070.046*
H1C−0.07010.85540.63050.046*
C20.0687 (2)0.73621 (18)0.71307 (7)0.0265 (3)
H2A0.00910.65560.69680.032*
H2B−0.01740.79730.72840.032*
C30.1907 (2)0.69027 (17)0.76010 (7)0.0229 (3)
H3A0.13330.62580.78480.028*
H3B0.22930.76980.78280.028*
C40.3418 (2)0.62117 (16)0.73509 (6)0.0201 (3)
H4A0.30210.54410.71120.024*
H4B0.41820.58440.76550.024*
C50.43854 (18)0.72223 (16)0.70031 (6)0.0193 (3)
C60.32331 (19)0.81387 (16)0.66234 (6)0.0204 (3)
C70.62175 (19)0.76581 (16)0.80585 (6)0.0194 (3)
C80.5588 (2)0.81362 (17)0.85544 (7)0.0240 (3)
H80.47730.88490.85460.029*
C90.6155 (2)0.75683 (18)0.90622 (7)0.0259 (4)
H90.57290.79070.94000.031*
C100.7334 (2)0.65141 (17)0.90856 (7)0.0241 (3)
C110.7935 (2)0.60218 (16)0.85848 (7)0.0220 (3)
H110.87270.52920.85920.026*
C120.73859 (19)0.65906 (16)0.80755 (6)0.0197 (3)
H120.78080.62510.77370.024*
C130.7979 (3)0.5920 (2)0.96396 (7)0.0344 (4)
H130.70350.58310.98890.052*
H13B0.88440.65240.98120.052*
H13C0.84740.50200.95770.052*
C140.46802 (19)0.53540 (17)0.61152 (6)0.0220 (3)
C150.4551 (2)0.39502 (18)0.61902 (7)0.0242 (3)
H150.50830.35330.65120.029*
C160.3648 (2)0.31557 (19)0.57978 (7)0.0273 (4)
H160.35680.21990.58540.033*
C170.2859 (2)0.37422 (19)0.53241 (7)0.0276 (4)
C180.2970 (2)0.5147 (2)0.52567 (7)0.0318 (4)
H180.24200.55630.49380.038*
C190.3866 (2)0.59541 (19)0.56450 (7)0.0288 (4)
H190.39260.69120.55910.035*
C200.1961 (2)0.2880 (2)0.48744 (8)0.0356 (4)
H20A0.09530.33640.47240.053*
H20B0.16210.20100.50360.053*
H20C0.27300.27090.45720.053*
U11U22U33U12U13U23
S10.0222 (2)0.0165 (2)0.0259 (2)−0.00289 (13)−0.00351 (15)0.00200 (13)
S20.0170 (2)0.0272 (2)0.0228 (2)0.00184 (14)0.00158 (14)−0.00095 (14)
N10.0186 (6)0.0239 (7)0.0269 (7)0.0039 (5)−0.0015 (5)−0.0002 (5)
O10.0270 (6)0.0237 (6)0.0289 (6)−0.0027 (5)−0.0023 (5)0.0067 (5)
C10.0246 (9)0.0338 (10)0.0329 (9)0.0076 (7)−0.0077 (7)−0.0009 (7)
C20.0188 (8)0.0266 (9)0.0342 (9)−0.0007 (6)0.0038 (6)−0.0022 (7)
C30.0221 (8)0.0212 (8)0.0259 (8)−0.0039 (6)0.0055 (6)−0.0023 (6)
C40.0201 (7)0.0169 (7)0.0233 (8)−0.0018 (6)0.0011 (6)−0.0005 (6)
C50.0174 (7)0.0184 (7)0.0221 (7)−0.0003 (6)0.0005 (5)0.0001 (6)
C60.0209 (7)0.0154 (7)0.0246 (8)−0.0002 (6)−0.0018 (6)−0.0017 (6)
C70.0178 (7)0.0176 (7)0.0225 (7)−0.0032 (6)−0.0016 (5)−0.0002 (6)
C80.0201 (8)0.0225 (8)0.0295 (8)0.0011 (6)0.0012 (6)−0.0055 (6)
C90.0253 (8)0.0297 (9)0.0231 (8)−0.0047 (7)0.0043 (6)−0.0069 (6)
C100.0248 (8)0.0252 (8)0.0219 (8)−0.0079 (6)−0.0012 (6)−0.0001 (6)
C110.0208 (7)0.0190 (8)0.0260 (8)−0.0013 (6)−0.0013 (6)0.0001 (6)
C120.0180 (7)0.0190 (8)0.0221 (7)−0.0017 (6)0.0017 (6)−0.0031 (5)
C130.0435 (11)0.0347 (10)0.0244 (9)−0.0040 (8)−0.0040 (7)0.0023 (7)
C140.0193 (7)0.0265 (8)0.0204 (7)0.0044 (6)0.0032 (5)−0.0016 (6)
C150.0234 (8)0.0265 (8)0.0226 (8)0.0041 (6)0.0027 (6)0.0016 (6)
C160.0270 (8)0.0256 (9)0.0297 (8)0.0005 (7)0.0062 (6)−0.0023 (7)
C170.0216 (8)0.0363 (10)0.0251 (8)0.0026 (7)0.0029 (6)−0.0070 (7)
C180.0353 (9)0.0364 (10)0.0232 (8)0.0098 (8)−0.0046 (7)−0.0013 (7)
C190.0346 (9)0.0267 (9)0.0250 (8)0.0059 (7)−0.0008 (7)0.0009 (7)
C200.0312 (9)0.0441 (11)0.0316 (9)−0.0026 (8)0.0034 (7)−0.0116 (8)
S1—C71.7738 (16)C9—C101.390 (3)
S1—C51.8531 (16)C9—H90.9500
S2—C141.7802 (17)C10—C111.396 (2)
S2—C51.8366 (16)C10—C131.513 (2)
N1—C61.345 (2)C11—C121.390 (2)
N1—C11.462 (2)C11—H110.9500
N1—C21.469 (2)C12—H120.9500
O1—C61.229 (2)C13—H130.9800
C1—H1A0.9800C13—H13B0.9800
C1—H1B0.9800C13—H13C0.9800
C1—H1C0.9800C14—C151.393 (2)
C2—C31.513 (2)C14—C191.398 (2)
C2—H2A0.9900C15—C161.390 (2)
C2—H2B0.9900C15—H150.9500
C3—C41.520 (2)C16—C171.390 (2)
C3—H3A0.9900C16—H160.9500
C3—H3B0.9900C17—C181.391 (3)
C4—C51.523 (2)C17—C201.516 (2)
C4—H4A0.9900C18—C191.387 (3)
C4—H4B0.9900C18—H180.9500
C5—C61.542 (2)C19—H190.9500
C7—C81.389 (2)C20—H20A0.9800
C7—C121.395 (2)C20—H20B0.9800
C8—C91.390 (2)C20—H20C0.9800
C8—H80.9500
C7—S1—C5105.06 (7)C9—C8—H8120.1
C14—S2—C5102.60 (7)C8—C9—C10121.29 (15)
C6—N1—C1116.97 (14)C8—C9—H9119.4
C6—N1—C2126.74 (14)C10—C9—H9119.4
C1—N1—C2116.19 (14)C9—C10—C11118.54 (15)
N1—C1—H1A109.5C9—C10—C13121.17 (16)
N1—C1—H1B109.5C11—C10—C13120.28 (16)
H1A—C1—H1B109.5C12—C11—C10120.56 (16)
N1—C1—H1C109.5C12—C11—H11119.7
H1A—C1—H1C109.5C10—C11—H11119.7
H1B—C1—H1C109.5C11—C12—C7120.31 (15)
N1—C2—C3112.24 (13)C11—C12—H12119.8
N1—C2—H2A109.2C7—C12—H12119.8
C3—C2—H2A109.2C10—C13—H13109.5
N1—C2—H2B109.2C10—C13—H13B109.5
C3—C2—H2B109.2H13—C13—H13B109.5
H2A—C2—H2B107.9C10—C13—H13C109.5
C2—C3—C4108.87 (13)H13—C13—H13C109.5
C2—C3—H3A109.9H13B—C13—H13C109.5
C4—C3—H3A109.9C15—C14—C19119.09 (15)
C2—C3—H3B109.9C15—C14—S2120.57 (12)
C4—C3—H3B109.9C19—C14—S2120.24 (13)
H3A—C3—H3B108.3C16—C15—C14120.38 (15)
C3—C4—C5110.42 (13)C16—C15—H15119.8
C3—C4—H4A109.6C14—C15—H15119.8
C5—C4—H4A109.6C15—C16—C17120.85 (17)
C3—C4—H4B109.6C15—C16—H16119.6
C5—C4—H4B109.6C17—C16—H16119.6
H4A—C4—H4B108.1C16—C17—C18118.45 (16)
C4—C5—C6113.82 (12)C16—C17—C20121.49 (17)
C4—C5—S2111.49 (11)C18—C17—C20120.01 (17)
C6—C5—S2110.31 (10)C19—C18—C17121.37 (16)
C4—C5—S1114.02 (10)C19—C18—H18119.3
C6—C5—S1101.67 (10)C17—C18—H18119.3
S2—C5—S1104.79 (7)C18—C19—C14119.84 (17)
O1—C6—N1121.93 (14)C18—C19—H19120.1
O1—C6—C5120.32 (14)C14—C19—H19120.1
N1—C6—C5117.75 (13)C17—C20—H20A109.5
C8—C7—C12119.48 (15)C17—C20—H20B109.5
C8—C7—S1118.66 (12)H20A—C20—H20B109.5
C12—C7—S1121.73 (12)C17—C20—H20C109.5
C7—C8—C9119.81 (16)H20A—C20—H20C109.5
C7—C8—H8120.1H20B—C20—H20C109.5
C6—N1—C2—C312.2 (2)C5—S1—C7—C1268.39 (14)
C1—N1—C2—C3−163.84 (14)C12—C7—C8—C91.4 (2)
N1—C2—C3—C4−47.35 (18)S1—C7—C8—C9−174.50 (12)
C2—C3—C4—C563.55 (16)C7—C8—C9—C10−0.7 (2)
C3—C4—C5—C6−43.61 (17)C8—C9—C10—C11−0.5 (2)
C3—C4—C5—S2−169.18 (10)C8—C9—C10—C13178.60 (16)
C3—C4—C5—S172.41 (14)C9—C10—C11—C121.1 (2)
C14—S2—C5—C465.40 (12)C13—C10—C11—C12−178.10 (15)
C14—S2—C5—C6−62.08 (12)C10—C11—C12—C7−0.3 (2)
C14—S2—C5—S1−170.79 (8)C8—C7—C12—C11−0.9 (2)
C7—S1—C5—C431.05 (13)S1—C7—C12—C11174.87 (12)
C7—S1—C5—C6153.97 (10)C5—S2—C14—C15−105.11 (14)
C7—S1—C5—S2−91.12 (8)C5—S2—C14—C1978.55 (14)
C1—N1—C6—O14.1 (2)C19—C14—C15—C161.1 (2)
C2—N1—C6—O1−171.93 (15)S2—C14—C15—C16−175.31 (12)
C1—N1—C6—C5−175.70 (14)C14—C15—C16—C170.0 (2)
C2—N1—C6—C58.2 (2)C15—C16—C17—C18−1.1 (3)
C4—C5—C6—O1−171.64 (14)C15—C16—C17—C20176.18 (16)
S2—C5—C6—O1−45.45 (17)C16—C17—C18—C191.1 (3)
S1—C5—C6—O165.30 (16)C20—C17—C18—C19−176.26 (16)
C4—C5—C6—N18.2 (2)C17—C18—C19—C140.0 (3)
S2—C5—C6—N1134.37 (13)C15—C14—C19—C18−1.1 (2)
S1—C5—C6—N1−114.88 (13)S2—C14—C19—C18175.28 (14)
C5—S1—C7—C8−115.80 (13)
Cg1 is the centroid of the C7–C12 ring.
D—H···AD—HH···AD···AD—H···A
C11—H11···O1i0.952.373.294 (3)166
C1—H1b···Cg1ii0.982.843.624 (2)137
C15—H15···Cg1iii0.952.883.459 (2)120
Table 1

Hydrogen-bond geometry (Å, °)

Cg1 is the centroid of the C7–C12 ring.

D—H⋯AD—HH⋯ADAD—H⋯A
C11—H11⋯O1i0.952.373.294 (3)166
C1—H1b⋯Cg1ii0.982.843.624 (2)137
C15—H15⋯Cg1iii0.952.883.459 (2)120

Symmetry codes: (i) ; (ii) ; (iii) .

  3 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  1-Methyl-3-phenyl-sulfonyl-2-piperidone.

Authors:  Julio Zukerman-Schpector; Paulo R Olivato; Carlos R Cerqueira; Elisângela Vinhato; Edward R T Tiekink
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-04-16

3.  3,3-Bis[(4-chloro-phen-yl)sulfan-yl]-1-methyl-piperidin-2-one.

Authors:  Julio Zukerman-Schpector; Carlos A De Simone; Paulo R Olivato; Carlos R Cerqueira; Jean M M Santos; Edward R T Tiekink
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-06-30
  3 in total
  2 in total

1.  1-Methyl-3,3-bis-(phenyl-sulfan-yl)piperidin-2-one.

Authors:  Ignez Caracelli; Paulo R Olivato; Carlos R Cerqueira; Jean M M Santos; Seik Weng Ng; Edward R T Tiekink
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-05-19

2.  3,3-Bis[(4-meth-oxy-phen-yl)sulfan-yl]-1-methyl-piperidin-2-one.

Authors:  Ignez Caracelli; Paulo R Olivato; Carlos R Cerqueira; Jean M M Santos; Seik Weng Ng; Edward R T Tiekink
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-06-13
  2 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.